Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ----------->GT1                                                       <---------ANAC46                                                      ------>NtERF2                                                      <------NtERF2                                                      --------->LBD16                                                    --------->ATERF1(1)                                                   --------->LBD16                                                   ------>NtERF2                                                  ------->GAMYB                                                  --------->ANAC46                                                 --------->MYB46(3)                                               --------->ARR14(2)------>MYB46(1)                                   --------->ARR11(3)--------->DEAR3(1)    ------>ZmHOX2a(1)              <---------ARR11(3)<---------ANAC46 ---------DOF2            --------->TOE2(3)    <---------ARR14(2)------>MYB83                -------- ->ZAT6                <---------ALFIN1    ------>ZmHOX2a(1)   <---------MYB59      --------->AHL20(2)   actttcctcttcttacatttatcaaacacctcaaaactatctttcctcacatccgccgcgtaaaacctaacatttgaaaacgaagattaaaaatcgaaag  223900                                   <---------MYB46(3)                             <---------MYB46(3)                           <---------MYB52(1)                        <---------LBD16                        ------>ZmHOX2a(2)                       --------->CCA1(2)                       <------ZmHOX2a(2)                      --------->AGP1<-------GAMYB                      <---------ARR14(2)                <------NtERF2                      <---------ARR11(3)               ------>NtERF2                       --------->LBD16                      --------->ARR14(2)              <---------ANAC46                   --------->DEAR3(2)                      --------->ARR11(1)         --------->MYB52(1)                     --------->MYB52(1)                      --------->ARR11(3) <---------ANAC46                         ------>ZmHOX2a(2) -                    ----------->ARR10  <---------At5g28300                        ===================                  ---------->DOF2 <---------TOE2(3)<---------DEAR3(1)             =================== ----------------->AGL1--------->ARR14(1)<---------ANAC58                       --------->ARR11(3)  < -->DOF2   ---------->DOF2--------->LBD16<---------ANAC58    --------->CCA1(2)  <---------ARR11(3)<--   ggttccaaaatcgaaaagaataaagatccggtgattgtggttaccgtgtaagaacggcgcgagagacgagttcgatgttcttgatcttgataccggcgaa  224000             --------->ARR14(2)                                                            --------->ANAC58             <---------ARR14(2)      XXXXXXXXXXXXXXXXXXXX>MIR774B                          --------->ANAC46            <------ZmHOX2a(1)  <-------TEIL                                                --------->ANAC58          <---------TOE1(3)   --------->CCA1(2)                                           <---------LBD16          <---------TOE2(3)   --------->ARR14(1)                                          --------->LBD16        --------->CCA1(2)    <---------GLK1(2)             <---------YAB1              <<<<<<<<<GATA-2       --------->ARR11(3)    --------->ARR14(2)         ----------->TGA1               <<<<<<<<<GATA-3 -------->At4g35610          <---------ARR14(2)       --------->YAB1                   <<<<<<<<<GATA-1 ==================HOX2a_HOX2a--------->GLK1(2)       <---------ICU4                 --------->WOX13(1) ====HOX2a_HOX2a           ----------->ARR10  --------->CCA1(2)                    <------ZmHOX2a(2) XXXXXXXXXXXXXXXXXXXXMIR774B*--------->ARR11(1)      --------->ICU4              <------ZmHOX2a(1) ----ZmHOX2a(1)         --------->LBD16     --------->CCA1(2)          ---------->DOF2 <<<<<<<<<GATA-4   ggagatgaagataaggatttggattccgagagattcggagacgaagagataagcgatgatgacgatgggaagagaaagaagaaggatcaatccacggaag  224100                                                                              <------NtERF2                                                                           --------->LBD16                                                                           --------->At4g35610                                                                         ------>ZmHOX2a(2)                                                                         <---------LBD16                                                                        --------->ARR14(1)                                                                        --------->CCA1(2)                                                                        <------ZmHOX2a(2)                                                                       --------->AGP1                                                                       <---------ARR14(3)                                                                       --------->ARR14(3)                                                                       --------->ARR11(3)                                                                       <---------ARR14(2)                                                                       <---------ARR11(3)                                                                       --------->ARR14(2)                  ------>NtERF2         --------->ARR11(3)            <---------GLK1(1) --------->YAB1        <----------DOF2                 <---------ARR11(3)           ----------->ARR10 <---------ATHB12   ----------->RAV1(2)              ---------->DOF2             <---------ANAC46  <------ZmHOX2a(2)  --------->MYB52(1)           --------->MYB52(1)      --------->At4g35610--------->ANAC46          <   agactacctgcttcaatggccaccagcatgaagtaagggaaagagcttcttgacagaagcagagtcccgtcgagatccgcagcgatcgaatcatactctc  224200                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                               <---------ANAC46                                                              ------>NtERF2                                                              <------NtERF2                                                             <---------RAP2.3(1)                                                            <---------RAP2.3(2)                                                        <---------ANAC58                                                        <---------ANAC58                                                     <----------DOF2                                                  <---------ARR11(3)                                                  --------->ARR11(3)              --------->MYB52(1)             <------NtERF2  <---------DEAR3(1)            <----------DOF2                 --------->LBD16 <---------ANAC46     --------->ZAT6                        --------->DEAR3(1)--------->LBD16              ---------->DOF2 ----------DOF2      <------ZmHOX2a(1)    <---------LBD16  <---------LBD16        <---------ZAT14   -   tgcttttacactcgcttatcggaggaaaacttcggctcttcttcgccggagacatctttcttgcggcgaatactggcgatttagtaaacagagaaagaga  224300                                        *TSS                                   ------>ZmHOX2a(1)                                  <---------ANAC58                               --------->ARR11(3)                               <---------ARR11(3)                              <---------HSFB2a(1)                              <------MYB83  <---------AHL20(2)                              --------->HSFB2a(1)                              <------MYB46(1)                   <---------MYB46(3)         <---------                              --------->HSFC1(2)             --------->MYB55(2)            <---------DAG2                              <---------HSFC1(2)             <---------MYB46(3)         <-----------GT1              ---------->DOF2<---------AtMYB61              <---------AtMYB61  ------->GAMYB         --------->CCA1(2)   ----------->ARR10       --------->DEAR3(1)      --------->At4g35610 --------->DOF2   ---------->DOF2 <---------ANAC58 ------->TEIL<--------P    <---------At4g35610   --   gataaagagagatttggaaagaaagagagggaaggtccttggggttttaaatgcgccttccagtggttgtttatcgctcaactgactaaataacttttca  224400                    --------->ANAC58                    --------->ANAC46           <-----------GT1        --------->YAB1      <---------YAB1--------->ANAC58        <---------ICU4    <---------AHL20(2)         ------>ZmHOX2a(1)    --------->AHL20(2)        --------->TOE2(3)   --------->AHL20(2)         --------->TOE1(3)                                                    --   <---------ATHB12 --------->ANAC55(2)     --------->YAB1                                <---------AHL20(2) -DOF2<---------TOE2(3)     <---------YAB1 <---------ATHB12         <-----------GT1      --------->AHL20(2) ---------->CBF   <-----------GT1      ------------>CBF <-----------GT1<----------DOF2   <---------AHL20(2)   gtccaattaatattaactatttacgaaattatccttaaactttcaatctttacaaaattaacccttcttatttctttatctccatgagaaattaaatgtt  224500                                                                 <---------YAB1                                                         <---------TOE2(3)                                                   <---------AHL20(2)           ----------->GT1                        <---------ARR11(3)           <---------ANAC55(2)                    --------->ARR11(3)                      <---------AHL20(2)           --------->ANAC55(2)                    <---------AHL20(1)                      --------->ATHB12       --------->ATHB12                           --------->AHL20(1)               <---------TOE2(3)      <---------YAB1                              <---------AHL20(2)    --------->ICU4   --------->AHL20(2)    --------->ANAC55(2)           --------->ANAC55(2)  <---------AHL20(2)     --------->ATHB12    <---------ANAC55(2)      ----------->HVH21    --------->AHL20(2)    <---------YAB1   --------->ICU4 ------->ANAC46    <---------TOE2(3)    <---------AHL20(2) --------->AHL20(2)<---------AHL20(2)   cacatcacatgattcgtaacaaaggtttcaattgacacttatttttttctaatatatttaagttaatatgagtgattatttgattagggtatttattaga  224600                                       ------->MYC3                                       <-------MYC3                                      --------->ANAC58                                      --------->ANAC58                        --------->AHL20(2)                        <---------YAB1--------->ANAC46                       --------->AHL20(2)                       --------->AHL20(1)                       --------->ATHB12          <---------ANAC46      <-----------HVH21              <---------YAB1                     ---        <------MYB46(1)<---------AHL20(1)       <---------MYB52(1)<---------WOX13(1)             <---        <------MYB83  --------->YAB1<---------ALFIN1<----------DOF2           ---------->DOF2   <----        <---------ANAC46<---------AHL20(2)  <-------TEIL<----------DOF2   ---------->DOF2     <------   tgatggaatttggtgtatacataaatataattttggtcacacgcggttcagttactttctttttgttgattgacatgaaagaaagtagtttagtagttca  224700                                                       <---------ANAC58                                                       <---------ANAC58                                              --------->YAB1                         <---------ANAC58  --------->YAB1                         <---------ANAC58 --------->AHL20(2)                         <---------ANAC46 <---------AHL20(2)     <---------ANAC46                    --------->ATHB12     --------->AHL20(2)      <---------ANAC58                   <---------AHL20(2)  <---------AHL20(2) <------MYB46(1)                   --------->AHL20(2) <---------AHL20(2)  <------MYB83               <---------YAB1      --------->YAB1      <-------GAMYB ------>TOE2(3)<---------AHL20(2) <---------YAB1  <-----------RAV1(1) ------------AGL15 --------->AHL20(1) --------->AHL20(2)<--------P                             <----- -------------AGL1 <---------AHL20(1)<---------YAB1   <---------MYB46(3) <-----------GT1       ------ ---ZAT18  ----------->GT1   ----------->GT1 <---------YAB1      <---------ANAC58              ------   cctaaatggaaggctgtataattaattgggtgagttattataaatttataatatgtgggttggcattgtgtgtatatactatatagtatccaactatacg  224800  Previous    Next  AGI:  At1g01610.1    Description:  ATGPAT4/GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase. Identical to Glycerol-3-phosphate acyltransferase 4 (GPAT4) [Arabidopsis Thaliana] (GB:Q9LMM0;GB:Q8W4N0); similar to GPAT8 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 8), acyltransferase/ glycerol-3-phosphate O-acyltransferase [Arabidopsis thaliana] (TAIR:AT4G00400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39628.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123) Range:  from: 221691    to: 224340    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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