Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ANAC58                                       --------->AHL20(2)                                       --------->AHL20(1)                                       <---------AHL20(1)                 <----------DOF2       <---------AHL20(2)              ------->TEIL            <---------AHL20(2)                                        -----            <-------TEIL<---------REM1(1)         --------->ANAC58                              <----        <-------TEIL   <---------TOE2(3)        --------->TOE1(2)                       ---------->DOF2 >TOE2(3)  --------->AtLEC2           --------->AHL20(2)        --------->ZAT6     <---------ANAC46   tatgtatacatacatgcatctttttgatgtagttaacaaaataaattataccaaggaaaatttctatcactaacaaaaacaaattgtttgtaaagcatat  199200                                                                                      <---------TOE1(3)                              ----------->GT1                                         <---------TOE2(3)                   --------->YAB1                                          <---------YAB1     <---------ZAT18      --------->ANAC58                            <---------RVE1(1)        <-----     --------->ZAT18      --------->ANAC58                            <---------CCA1(1) --------->ARR11(3) <-----------RAV1(1)  ---------->DOF2                                <---------ARR11(3) <---------ARR11(3) ---->AHL20(2)<---------AHL20(2)                             --------->AtMYB61        <---------YAB1 -----AHL20(2)--------->AHL20(2)                 ----------->GT1     --------->ARR11(3)--------->YAB1   aaattgttgcactaaataaaatcataaaacgctagttaatatgtcaacatgcggtttaatcgaccatcagagatattttcattcatttaagataatatca  199300                                                                 ----------->GT1                                                                 --------->ANAC46                                                                 --------->ANAC58                                                                 <----------ID1                                                                 --------->ANAC58                 ---                                                      --------->TOE2(3)                          ----                                                     --------->ATHB12                            <---                                                     <---------ICU4                              ----                                                     --------->YAB1                              <---                                   ---------->DOF2  <---------ATHB12                            <----   >>>>>>>>>>>>>>>>>LFY  <-----------GT1            --------->ICU4        --------->AHL20(2)    <----  <-----------GT1 <---------At4g35610     --------->ICU4      <---------ARR14(2)          ----------- ------GT1        --------->At4g35610     <---------YAB1      --------->ARR14(2) --------->ZAT6 -----   catttttccaatggccacttagctaaattactctttgaaaagtcattatagaaaatcattaacaaatacgaaaaaaaaaaataccactaaaatggttaat  199400                                           <---------MYB52(1)                                          <---------At4g35610                 ==================HOX2a_HOX2a                 ------>ZmHOX2a(2)        --------->At4g35610                 ===========================HOX2a_HOX2a                ===================HOX2a_HOX2a                ============================HOX2a_HOX2a                <------ZmHOX2a(2)       ------>ZmHOX2a(2)                --------->CCA1(2)      --------->ARR14(1)         --------->ANAC58              <------ZmHOX2a(2)         --------->ANAC46             <---------ARR14(2)         --------->ANAC58             --------->ARR14(2)      <---------ARR14(2)    <------ZmHOX2a(1) ------>TOE2(3)--------->ARR14(2)    <------ZmHOX2a(1) ----->YAB1    <---------ARR14(2)   ----------->ARR10 ------ICU4    --------->AGP1      --------->SPL7  --------->ATHB51 ----->ATHB12  <---------ARR11(3)  <---------TOE1(2) <---------WOX13(1) -----HAHB4    --------->ARR11(3)<---------SPL7   <---------YAB1 -----ATHB12   <---------AGP1   <---------ANAC46  --------->ICU4    --------->At4g35610 -----YAB1   ----------->ARR10 <------NtERF2 ------>NtERF2       <---------At4g35610 >GT1 --------->ARR14(2)    ===================HOX2a_HOX2a<----------DOF2 ---->ICU4 ---------->DOF2  ==================HOX2a_HOX2a <---------DAG2                     --------   cattaacaaatacgaaagatctgaaaattaggagccgtaggatccgctggctataattgactttttcatcagatgtacaagtaggcctgagttgaacaaa  199500                                                       <---------ARR14(2)                                                       --------->MYB52(1)                                                       --------->ARR14(2)                                                     --------->LBD16                                                    <---------ANAC55(2)              --------->ANAC58                      --------->ANAC55(2)              --------->ANAC58                  <---------At4g35610              --------->ANAC46                  --------->At4g35610              --------->ANAC55(1)          ----------->HVH21           --------->ZAT14                --------->LBD16           <---------ARR14(2)             <-----------HVH21           <---------REM1(2)             <---------ANAC58                                           -           --------->ARR14(2)            <---------ANAC55(2)                                        -        ------->GAMYB <---------At4g35610--------->ANAC55(2)                                        -       --------------->AtSPL3            <---------ANAC58                                      <-----       --------------->AtSPL8            <---------bZIP60(1)                                   ------       <------------AtMYB77  <---------At4g35610--------->ZAT2            ----------->RAV1(2) ------>MYB83     --------->ARR14(2)      --------->At4g35610<---------ZAT2          <---------ALFIN1    <--------     <---------ARR14(2)------>ZmHOX2a(2) --------->bZIP60(1)      <---------GLK1(2)         <-------- ->MYB46(3)--------->SPL7<-----------HVH21<-----------TGA1     --------->YAB1<-----------HVH21------>MYB46(1)   cacatcgtaaccgtacacgcattgatctgtcatctaagttgttccgtcacagctccgtaactgaaacataatctccacctgtcactatcgtctaccaaat  199600                                                                           <--------P         <---------MYB59                                                   <---------MYB52(1)         --------->TOE1(3)                                                <-------GAMYB -------->ANAC58                                                         <---------MYB46(3) -------->ANAC58                                                   <----------DOF2 -------->ANAC46                                            --------->ANAC58 ----ARR14(2)                                               --------->ANAC46                   ------ --->ARR14(2)                          *TSS <---------YAB1  --------->ANAC58                  ------- -MYB111(1)   <-----------GT1         <---------MYB46(3)   --------->RAP2.6(3)              -------->P -MYB59  --------->TOE2(3)      <----------DOF2    --------->At4g35610  <---------TOE2(3) --------->MYB46(3)   ccacgacaaaacctaaataccacttattagttttctttagtggtttattaatctgcagaaatacggcaacttttgtggttagtcatataagaacaaccgc  199700                                  <---------ETT(2)                          --------->HSFB2a(1)                          --------->HSFC1(2)                                                  <------                          <---------HSFC1(2)                                                 ------>ZmHOX2a(2)                          <---------HSFB2a(1)                                              --------->ARR11(3)                     --------->LBD16                                                 ------>ZmHOX2a(2)                     --------->HSFB2a(2)                                       <---------ANAC58                     <---------HSFB2a(2)                <-----------GT1        <---------ANAC58   ---                     ------>ZmHOX2a(1)             <---------AHL20(2)          --------->TOE2(3)<---- --->LBD16          <---------LBD16                --------->AHL20(2) ----------->HVH21    <---------ARR11(3) >GAMYB         <----------DOF2   <---------ZAT18<----------DOF2   --------->ZAT6  <---------ARR11(3)   gttacaaacttctctcgtctttcctggaaatttctgtccacaaatattagtctttaattttcggtatgaacactgacccttccttgatctattgatcttt  199800                                                 --------->AHL20(1)                  <---------AHL20(2)             <---------AHL20(1)               <---------ARR11(3)              <---------TOE2(3)        <---------AHL20(2)      <---------RAP2.3(3)       --------->AHL20(2) <-----------HVH21 <---------WOX13(1)                          --------->HSFB2a(1)       --------->ICU4 --------->ZAT6     <---------YAB1                                 <---------HSFC1(2)  <---------TOE1(2) <-----------GT1   <----------DOF2                        <----------DOF2    <---- ----DOF2    <---------TOE2(3)  <---------DEAR3(1)                  <---------ANAC58    --------->HSFC1(2) ------->ID1 <---------YAB1    --------->RAP2.6(3)    <-----------GT1 <---------CCA1(2) <---------HSFB2a(1) -------RAV1(1)--------->ARR11(3)   <----------DOF2  <-----------GT1<---------ANAC58  <---------GLK1(2)   gtcgcagtatttattaagattttatctctatcagacggctcttttgattaatatttttccgactcttatttcttatcttctttgctcagaaacttctctc  199900                                                                                 <----------DOF2             --------->YAB1                <------ZmHOX2a(2)                 <---------RAP2.6(2)            <-------TEIL            --------->ZAT18<----------DOF2         <-----------GT1   <---------ARR14(2)               --------->ETT(2)                    <---------AHL20(2) -------RAV1(2)      <---------AtMYB61  --------->DEAR3(1)          <---------AHL20(2)          -----   aggcgaattcaagtttcatagttttggtctagtttttgtccaccgatctatctctttaggtgagttttgtttatttttttcggctttatagtttgtctac  200000                                                                                                <----                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                              <------                                                                                             <-------                                                                                             --------                     --------->YAB1                           --------------->AGL15          <-------                    <---------YAB1                    <---------CCA1(2)                      --------                   <---------AHL20(2)             ------>ZmHOX2a(2)     --------->CCA1(2)    <-------                   --------->AHL20(2)           --------->ARR11(3)    <<<<<<<<<RAP2.2        --------                  --------->YAB1            <----------DOF2   <---------------AGL15         <--------                 <---------YAB1          <---------ARR11(3)  <-----------------AGL3    <---------GLK1(1)   <-----------RAV1(1)--------->ARR11(3) --------->ARR11(3)  <-----------------AGL2    --------->GLK1(1) ---->ANAC46  <---------YAB1           <---------TOE2(3)  <----------DOF2         <---------LBD16   gcttcatgttgttgttgttattataatcttgtgtttgaattgaggtctttgatctcgtttctttctgaatttagatatgtgttattcggatttcagatct  200100  Previous    Next  AGI:  At1g01550.1    Description:  BPS1 (BYPASS 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46080.1); similar to unknown [Populus trichocarpa] (GB:ABK94247.1) Range:  from: 199639    to: 201775    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version