Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        >>>>>>>>>>>>>>>             --------->YAB1                                       <-----------GT1     <<<<<<<<<<<<<<<   <---------WRKY38(1)                                           <-----------GT1  ---------->DOF2   <---------WRKY12                               <---------AHL20(2)             <---------ATHB12<---  --------->WRKY18(1)    <---------ANAC58         --------->AHL20(2)    --------->ARR14(2)       ---- --------TOE1(3)         <---------ANAC46         --------->AHL20(1)    <---------ARR14(2) <---------ATHB12 --------TOE2(3)         <---------ANAC58   <-------TEIL      <---------ARR11(3) --------->AHL20(2)   taaggtcaacatttttcataagaagttgcttagaaatagccttgggttcaaataaaatacacatgattttcccgtttccaccaataaatcccaatggatt  175400                                                                         --------->CCA1(2)                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                              <-----------------AG                                                              ----------------->AGL3                                                              <-----------------AGL1                                                              ----------------->AG                                                              <-----------------AGL3                                                              ----------------->AGL2                                                              ----------------->AGL1                                                             -------->P <---------ARR14(2)             --------->GLK1(1)                       --------->TOE2(3)  --------->ARR14(2)             <---------GLK1(1)                <---------AHL20(2) ------>MYB46(1) >>LFY   --------->ANAC58                    --------->AHL20(2)  ------>MYB83 <<LFY   --------->ANAC58                    <---------AHL20(2)--------------->AGL15 ------AHL20(2)            --------->ATHB12  --------->AHL20(1)<---------MYB59   ----------->GT1 ----->AHL20(2)<---------ATHB12              <---------AHL20(1)<---------------AGL15              <--   ttaatactgaaacggaaatcaatgcgaaactattggagtaagaccaatttattcatcttaatctaccaaattcggatacgatatgtttaatacaagggag  175500                            --------->AHL20(2)                            <---------AHL20(2)                            <---------AHL20(1)                                 --------->YAB1                   ------->GAMYB                                               ----------->GT1             --------->ANAC46<---------AHL20(2)             <-----------------AGL1      --------->ANAC58--------->YAB1            --------->YAB1                <---------ATHB12      --------->ANAC58--------->TOE2(3)     <---------AHL20(2)      ----------->GT1        <-------TEIL -------WOX13(1)  --------->MYB46(3)        --------->AHL20(2)      --------->YAB1    ---------->DOF2   attgatgctagcaaaacacaaccatcttaattttttttttttttttttaattagaaattcccttcccaaatggtaattcaatcgtaacaaaagtacgttt  175600                                    <---------ANAC58                                    <---------ANAC58                              <---------MYB46(3)                           <---------ANAC58                           <---------ANAC58                                                       <--                        <-----------GT1                                                           <--                    <---------CCA1(1)       <----------DOF2               <----------DOF2        <---                    <---------RVE1(1)       <---------DAG2         ------>ZmHOX2a(1)     ----------->RAV1(1)                   --------->ARR11(3)    <-----------GT1          <---------MYB59        <---------ALFIN1                   <---------ARR11(3) <---------MYB46(3)       <---------ARR14(2)     --------->ANAC46            <---------AtLEC2 <---------TOE1(2)  <-----------GT1--------->ARR14(2)     --------->PCF2   tgaaatattgttttggatggagattttttccttggttcgcttgttacttttcacttgtttcatcaaatcctaactccttttattttggaccccacatcaa  175700                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                    <---------ZAT18                                                                    <---------ZAT14                                                                    --------->ZAT18                                                                    --------->ZAT14                                                                <---------------AtSPL8                                                                <---------ICU4                                          --------->ANAC58     --------->ICU4                                          --------->ANAC58 --------->DOF5.7(2)     <------MYB83                       ---------->DOF2    <---------MYB52(1)     <------MYB46(1)                  ----------->TBP     --------->TOE2(3)                   <------ZmHOX2a(2) --------DOF2                         <---------AHL20(2)  --------->TOE1(3)                  <------- -------DAG2------>ZmHOX2a(1)       ----------->TBP     <---------TOE2(2)         *TSS --------->YAB1 --------------AGL3               ------>ZmHOX2a(1)     <---------TOE1(2) ----------->RAV1(1)--------   ctttatttggtctcctcaaggtttctgtttcaactcctatataaaagcaaataactcatacgttaattagtacacaccacaaaaacttgtcataagatca  175800                                                                                     --------->ZAT18                                                                      --------->LBD16<---------ZAT14                                                                     <---------HSFB2a(2)                                                                     --------->HSFB2a(2)                                                                     --------->LBD16 <---------ZAT18                                                                    <---------HSFB2a(2)                                                                    --------->HSFB2a(2)         --------->LBD16                                            <---------LBD16  --------->ZAT14        --------->ANAC46                                            <---------ANAC46 <-------TEIL --ARR11(3)                      ---------->DOF2                   <---------LBD16  --------->ALFIN1 ->ARR11(3)                 --------->At4g35610----------->HVH21 <---------SPL7---------->DOF2   atatcgatacccccaaaaaaaaaaaaaaacagctacaaagaagtgagaattgacacagcaaatgggtcttccgggaaaaaataaaggtgcagttttgtcg  175900                                                                       ==============================                                                                       ------>ZmHOX2a(1)                                                                       <----------DOF2                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)     ------->GAMYB                                                                   <---------GLK1(2)     --------->MYB46(3)                    --------->ANAC46                               <---------ARR11(3)  --------->SPL7                 <---------REM1(2)                                 --------->ARR11(3)  <---------ARR14(2)               --------->YAB1                                      --------->ARR14(2)  --------->ARR14(2)              <---------ATHB12                             <----------ID1           --------->ANAC46             --------->ANAC58                             --------->SPL7            --------->ANAC55(2)             --------->ANAC58                <---------MYB46(3)  ----------->ARR10  <---------ANAC55(2)            --------->WOX13(1)              <---------WOX13(1) ---------->DOF2     <---------LBD16           --------->MYB46(3)          <----------DOF2--------->At4g35610      <----------DOF2       <---------MYB52(2)          --------->ZAT14    <---------At4g35610     <---------ICU4    <----------ID1 <---------LBD16 <---------ZAT14 ---------->DOF2 <---------ARR14(2)--------->LBD16<   aagatagcgactaacaatcaacacggagagaactcagagtactttgatggatggaaagcttacgacaaagatccttttcatctttcccgtaacccccatg  176000                                                          ----------->GT1                           --------->MYB59              --------->YAB1                           <---------------AtSPL8   --------->AHL20(2)                --------->AtLEC2     --------->AHL20(2)<---------ATHB12              <---------ANAC58     <---------GLK1(2)<---------AHL20(2)           <---------AtLEC2              <---------ANAC58 <-------TEIL        <---------ATHB12         <---------MYB52(1) ======HOX2a_HOX2a        <-----------RAV1(2)      --------->AHL20(2)      <-------GAMYB ------ZmHOX2a(2)       --------->GLK1(2)  <---------AHL20(2)    <-----------RAV1(1)  ------->TEIL   ggatcatccaaatgggtcttgcagagaatcaggtacagattatatataatccaataaatcatgttatatgttgttgtcgttgtgcatgaacttccatcta  176100                              --------->ANAC58                              --------->ANAC58                 --------->ANAC58                 <---------ANAC55(2)                 --------->ANAC55(1)                 --------->ANAC55(2)                 --------->ANAC58      <---------AHL20(2) --------->ANAC46          <----------DOF2     <---------ANAC55(2)     --------->AHL20(2)--------->ANAC46      <-----------GT1           --------->ANAC55(2)     --------->YAB1 <---------ARR14(2)  <----------DOF2          --------->AHL20(2)   <-----------GT1    <---------YAB1  --------->ARR14(2) <---------DAG2         ----------->GT1<-----------GT1   ttagctattatatatgaacacgtatacacatcaagctaatacctttttttcttcttttcaagtcaagttaaatacttaataacacatttttctaaacttc  176200                                                                                  <---------ZAT14                                 ---------->DOF2--------->HSFC1(2)                --------->ZAT14           ----------->ARR10    <---------WRKY38(1)                        --------->YAB1        <---------ANAC46        <---------WRKY12--------->HSFB2a(1)   <---------ARR11(3)        <---------ANAC58        <---------WRKY45<---------HSFC1(2)    --------->ARR11(3)        <---------ANAC58      <-----------HVH21 <---------HSFB2a(1) <---------TOE2(3)    --------->bZIP60(1)    <----------DOF2     --------->ATHB12      <---------GLK1(2)     <---------TOE1(3)    <---------bZIP60(1)   ttacagctttgcttagatttgatcaaagattgggtcaaagagaacccagaagcttctatttgcacccttgaaggtattcatcagtttagcgacatcgcta  176300  Previous    Next  AGI:  At1g01480.1    Description:  ACS2 (1-Amino-cyclopropane-1-carboxylate synthase 2). Identical to 1-aminocyclopropane-1-carboxylate synthase 2 (ACS2) [Arabidopsis Thaliana] (GB:Q06402;GB:Q941E7); similar to ACS1 (ACC SYNTHASE 1), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT3G61510.1); similar to ACC synthase [Citrus sinensis] (GB:CAB60831.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Diospyros kaki] (GB:BAB89349.1); similar to ACC synthase [Brassica oleracea var. italica] (GB:AAL37504.1); contains InterPro domain Aminotransferases, class-I, pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotran Range:  from: 175782    to: 178400    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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