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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
GT1
----------->
GT1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
At5g28300
----->
ARR11(3)
<---------
AHL20(1)
>>>>>>>>>
RAP2.2
----->
AHL20(1)
--------->
ARR11(3)
--------->
ARR14(2)
------
ARR11(3)
<---------
ARR11(3)
<---------
ARR11(3)
------
AHL20(1)
<---------
AHL20(2)
<---------
ARR11(1)
---->
YAB1
--------->
AHL20(1)
<---------
CCA1(2)
------>
ZmHOX2a(2)
--
>
RAV1(1)
--------->
AHL20(2)
<---------
ATHB12
<-----------
GT1
<---------
ZAT6
<--
atattccatattgtattagaaatatatttagttacaaaatcaaatcaaaccatatctaaattaccgtgatccaagtgaaatgaagtgatagtctaaacaa
87800
-
-
-
<
<
<
<
----
<---
---------->
DOF2
<-------
<---------
AHL20(2)
---------
--------->
AHL20(1)
--------->
ATERF1(1)
<---------
AHL20(1)
<------
NtERF2
--------->
AHL20(2)
<---------
DEAR3(2)
--------->
AHL20(2)
<---------
DEAR3(1)
--------->
DAG2
--------->
AHL20(1)
<---------
DEAR3(1)
---------->
DOF2
<---------
AHL20(1)
<---------
WRKY18(1)
------->
ATHB12
<---------
AHL20(2)
<---------
YAB1
<-----------
GT1
<---------
ABI4(1)
-------
ATHB12
--------->
At4g35610
--------->
YAB1
--------->
CCA1(2)
----------->
HVH21
<-
atgatttgaatccaaaagtgagagcttaataaaatatataaagaattatcaatgtgtttttggatatagatgatataac
ctctcttgaccggcggtgtcc
87900
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
-------->
AGP1
-------->
ARR11(3)
-------->
ARR14(2)
-----------
ARR10
---------
ARR11(3)
<---------
ANAC58
---------
AGP1
--------->
ANAC55(2)
<--------
P
---------
ARR14(2)
<---------
ANAC55(1)
<---------
WOX13(1)
----->
HSFB2a(2)
<---------
ANAC58
<---------
MYB46(3)
<-------
------
HSFB2a(2)
<---------
ANAC55(2)
--------->
ATHB12
<-------
----
HVH21
----------->
HVH21
<---------
ANAC46
<---------
ATHB12
--------->
MYB52(1)
>
ALFIN1
<----------
DOF2
<---------
AtMYB61
--------->
ANAC46
--------->
YAB1
<-------
--------
CCA1(2)
--------->
LBD16
--------->
LBD16
------>
NtERF2
<---------
ICU4
<---------
MYB52(1)
cagatctgagctttgacgagtttgccccgaagagtgatggtccgtgtctgaaactcgacaccaatggttgattttgaatcataacagaactcgttgtgtg
88000
----------->
RAV1(1)
------>
NtERF2
----------->
HVH21
--------->
LBD16
<---------
ETT(1)
<---------
ANAC58
--------->
DEAR3(1)
<---------
DEAR3(1)
<---------
ANAC46
--------->
AtMYB61
------>
NtERF2
<---------
ANAC58
<---------
ARR14(2)
--------->
LBD16
<----
<-------
TEIL
--------->
ARR14(2)
<---------
LBD16
<----
--------->
At4g35610
--------->
GLK1(2)
<---------
ANAC55(2)
<---------
TOE2(2)
--------->
ZAT2
--------->
ARR14(2)
--------->
ANAC46
<---------
LBD16
<----
<---------
ZAT2
<---------
ARR14(2)
--------->
ANAC58
--------->
ANAC46
<----
<---------
At4g35610
<---------
GLK1(2)
--------->
ANAC55(1)
<---------
TOE1(2)
--------->
TOE1(2)
--------->
ANAC46
--------->
MYB46(3)
<----------
DOF2
<--------
<-----------
HVH21
--------->
HSFB2a(2)
--------->
YAB1
--------->
ANAC55(2)
<------
NtERF2
<----
<---------
ANAC55(2)
<---------
HSFB2a(2)
<---------
ATHB12
--------->
ANAC58
<---------
RAP2.6(2)
-----
--
ANAC46
--------->
ARR14(2)
--------->
At4g35610
<---------
ALFIN1
------>
ZmHOX2a(2)
<---------
MYB52(1)
--
ANAC58
<---------
ARR14(2)
<---------
At4g35610
--------->
AtMYB61
--------->
ARR11(3)
<---------
MYB46(3)
--
ANAC58
<------
ZmHOX2a(1)
----------->
RAV1(1)
--------->
MYB46(3)
<---------
ARR11(3)
<---------
DEAR3(2)
taaaacgtgagaggagctgcgttttcccgacagcagaatctccaatgaccaccaccttgaacacgtaatcgatcttttccggcatcgtcggtttctttac
88100
<---------
At4g35610
--------->
DEAR3(1)
----------->
HVH21
<---------
ATERF1(1)
--------->
At4g35610
<---------
MYB46(3)
<---------
At5g28300
<---------
At4g35610
------
-----
ANAC58
------>
NtERF2
<---------
ANAC46
---------
-----
ANAC46
--------->
LBD16
--------->
ATHB51
----------
-----
ANAC58
<---------
DEAR3(1)
--------->
ATHB12
--------->
ZAT14
-----
ANAC55(1)
------>
NtERF2
<---------
ICU4
<----------
DOF2
--
DOF2
<---------
LBD16
<---------
CCA1(2)
--------->
ZAT18
--------------->
AGL15
-----
ANAC55(2)
<---------
ATERF1(1)
<---------
YAB1
---------->
DOF2
<---------
ZAT14
---->
ANAC55(2)
--------->
DEAR3(1)
--------->
ICU4
--------->
YAB1
<---------------
AGL15
gtgtttgttattctccggcgactcaccgctcatctcttcgttcat
tattgcgctgatgaagaaaacaactataaagtttaagtctcttttgagtaaagtg
88200
<---------
MYB59
--------->
ANAC46
<-----------
GT1
<---------
ARR14(2)
--------->
KAN4(2)
<---------
KAN4(1)
------
<-----------
TBP
<----------
TaMYB80
<-----
----------->
GT1
<------
MYB83
---------->
TaMYB80
<---------
ALFIN1
--->
ALFIN1
---------->
DOF2
>>>>>>>>>
CBP60g
--------------->
AtSPL3
--------->
MYB46(3)
>
DAG2
*
TSS
---------->
DOF2
<------
MYB46(1)
<---------
KAN4(2)
--------------->
AtSPL8
>
DOF2
----------->
GT1
>>>>>>>>>
SARD1
<---------------
AtSPL3
--------->
GLK1(2)
ggagtgagtgaaa
cagagaaaagagaagaaaggagaagaaatttggttttatatggttcagtacgaatataccgaattaacaaaaattctgaaccacttc
88300
--------->
ARR14(2)
<------
MYB83
<--------
P
<------
MYB46(1)
<---------
ANAC46
<---------
AtMYB61
<------
MYB46(1)
--------->
AHL20(2)
--------->
MYB59
--------->
ATHB12
<---------
AHL20(2)
<------
MYB83
<------
MYB83
--------->
TOE2(3)
<---------
ANAC58
<---------
MYB46(3)
--------->
ANAC58
<---------
ANAC46
--------->
MYB55(2)
--------->
ANAC46
<---------
AHL20(2)
----------->
GT1
<------------
CBF
--------->
YAB1
--------->
YAB1
<---------
ANAC55(2)
--->
ZAT14
<------
MYB83
<-----------
GT1
--------->
AHL20(2)
<---------
ANAC58
<---
----
ZAT14
<------
MYB46(1)
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC46
<------
MYB46(1)
agtgagattggttggattcactcataaccattcgcaaccatatttaataaaactaaaactgctacaaaccaaaatttcgtaaatttggtttggtttaagt
88400
--------->
DAG2
---------->
DOF2
------>
ZmHOX2a(1)
<---------
YAB1
<---------
ARR14(2)
<---------
AHL20(2)
--------->
ARR14(2)
--------->
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC58
--------->
ALFIN1
<----------
DOF2
<---------
AHL20(2)
--------->
TOE1(3)
<---------
ZAT18
--------->
AHL20(2)
<---------
MYB59
----------->
RAV1(1)
<---------
AHL20(2)
------
MYB46(3)
<---------
AHL20(2)
--------->
TOE2(3)
--------->
At4g35610
<---------
YAB1
cgttgaaataacccaaactaaaattaaatattgagtatcctaacctaaaagtgttgatatatgaagacagcaacaatgctctgtgcattattttaattag
88500
--------->
DREB2C(2)
<----------
DOF2
--------->
WRKY38(1)
--------->
AHL20(2)
--------->
ALFIN1
----
<---------
AHL20(2)
<----------
DOF2
----
--------->
AHL20(2)
<---------
ANAC46
<----
<---------
AHL20(2)
<---------
ANAC58
<--------
--------->
YAB1
<---------
ANAC58
---------
<---------
AHL20(2)
<---------
At4g35610
------->
TEIL
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AtLEC2
--------->
AHL20(2)
<---------
DAG2
------->
TEIL
--------->
AHL20(2)
<---------
ANAC46
-----
<----------
DOF2
<---------
YAB1
<---------
YAB1
--------->
ICU4
<-----------
RAV1(1)
--------->
DEAR3(2)
ctcttcttttatatataattttaattagctttttatatatgattcaaaatgaatatacaatgtttaaatatagctgtggcttgtgggcatggaccgacat
88600
--------->
TOE2(3)
----->
ATHB12
----->
ATHB51
<---------
ARR11(3)
-----
YAB1
<---------
AHL20(2)
<---------
ZAT6
--------->
ARR11(3)
-
DDF1
----------->
GT1
<---------
ATHB12
--------->
DAG2
-->
RAV1(1)
--------->
ICU4
----------->
GT1
--------->
TOE1(2)
---------->
DOF2
<-
---->
ICU4
<---------
YAB1
<---------
YAB1
--------->
TOE2(2)
--------->
TOE2(3)
<-
aattgaaaaacgttattattttgctaaatcaatatagtgatacaacatgaaacccacgatttgtctggagaccacctaaaaaagctcttatgctccatca
88700
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AGI:
At1g01200.1
Description:
AtRABA3 (Arabidopsis Rab GTPase homolog A3); GTP binding. similar to SMG1 (SMALL MOLECULAR WEIGHT G-PROTEIN 1), GTP binding [Arabidopsis thaliana] (TAIR:AT5G47960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24288.1); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579)
Range:
from: 86515
to: 88213
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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