AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------>ZmHOX2a(1) <-----------HVH21 --------GT1 <-----------GT1 <-----------GT1 ------->TEIL ---DOF2 <----------TaMYB80 ------->TEIL ------->TEIL
ttccttagcaaagtttgttaagcatattcgacctccaatatactccatataatgtatactccatataatgtatttttctccatcacatgtatgtatgtct	26551400
----------->RAV1(1) --------------->AGL15 <---------------AGL15 ----------------->AG ----------------->AGL3 ----------->GT1 ----------------->AGL2 <---------ALFIN1 ----------------->AGL1 ------>ZmHOX2a(1) <----------DOF2
ataaaattccaaaataagcaacaatgttctaaaacgatgagacattaataatattcctaagaataaaaatcgtgtacacggctttcccaccgttaaatgc	26551500
<----------DOF2 <----------DOF2 <-----------GT1 <------ZmHOX2a(2) <-----------GT1 <----------DOF2 <----------DOF2
cattattttcgatcatattcgggtttcaacagttcaacttgttaacaaatttccttttcaatttcatcttttaactttagattcttttcccctaatatcc	26551600
<----------ID1 ---------->DOF2 <-------TEIL ---------->DOF2 ------>ZmHOX2a(1) ----------->GT1
attggttaagataaaaagcacaaattccttcctataatccacaagaaaggtagaagaaaactagaaaccgagagataaaatggattcatcaatgggccta	26551700
------>ZmHOX2a(2) ------->GAMYB ------------>CBF <----------DOF2 ---------->DOF2 <------------CBF ---------->DOF2 <-----------------AGL3 ----------->RAV1(1) <----------DOF2
ttttaaagcaaattgttaatgagctttttatgggcaaatttaacaaagaccaacagaagattggatcgcaattaatgggcttttatgcataagattaagt	26551800
------->GAMYB *TSS <-----------GT1 <- ------->TEIL ----------->GT1 <-------
gattatgcatttaatatttgaattactagaaattaacacatactttgtaataataaccacaacttcccaatcttcttcatcagattttgctagttcgtca	26551900
<------ZmHOX2a(2) --------ALFIN1 <-----------GT1 <-----------GT1 ----HVH21 ---------->ID1 ------>ZmHOX2a(2) ---------->DOF2
cacacacggatcatgtaatctgcttcttcttcgtttttacgatttgatcccaaagtttttcaattctataaatttgtgaaagcgaatcgtttgatttgac	26552000
<----------DOF2 <-----------TGA1 ------>ZmHOX2a(1) <----------DOF2 <------NtERF2 <---------ALFIN1 ------>NtERF2
ttataggttgactcttttctttggaaatggcagcgtcatcatcttctcttcttcttctccacaagcccacctacaatttccatttcgccgcttcctctgt	26552100
------>ZmHOX2a(2) <----------DOF2 <---------
tcccacttacatcaattccgctcgatttcgaatttcgagctcaatcttccctttggatcgaagaagaagaagaagaatctggtctgtctctggctttaaa	26552200
<------NtERF2 ----------------->AGL1 <------ZmHOX2a(2) <------NtERF2 -DOF2 ----------->GT1 ----------->GT1 <----------DOF2 <-----------HVH21
tctatggccgatttggttaaaaccaatgctcgcagagacggtgaagatcgattccaagcgctcgagcaagaggctttcatcagtaattcgtcgtcggagc	26552300

AGI:	At5g66450.1
Description:	phosphatidic acid phosphatase-related / PAP2-related. similar to phosphatidic acid phosphatase-related / PAP2-related [Arabidopsis thaliana] (TAIR:AT3G50920.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45850.1); contains InterPro domain Phosphatidic acid phosphatase type 2/haloperoxidase; (InterPro:IPR000326)
Range:	from: 26551842	to: 26553271	Orientation: Forward
Links:	TAIR MIPS

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