AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<----------TaMYB80 ---------->TaMYB80 -------->ALFIN1 ----------HVH21 <------NtERF2 ------>TGA1a ----------->RAV1(2) -------TGA1a <-------TEIL <------ZmHOX2a(2) -------O2 ----------->ARR10 <-----------HVH21 <-----------HVH21 ------>O2 <---------ALFIN1 ------->GAMYB ---------->ID1 <---------ALFIN1
acgtgaggcatattctcatccaccgttagattcggatttgaatccaaatcagtaacgatcacctgtttgtcgtcgtagacaatcccctccgtcaaatctt	26547900
<-------GAMYB --------->ALFIN1 <------NtERF2 ----------->RAV1(2) <-------GAMYB ------->TEIL --------->ALFIN1 ----------->HVH21 <---------ABI4(1) ------>ZmHOX2a(2) <------NtERF2 <------ZmHOX2a(2) ------>NtERF2 <---------AGP1 <---------O2 --------->AGP1 --------->O2 ------>ZmHOX2a(2) ----------->HVH21 <-----------ARR10 <--------P ----------->HVH21 ----------->HVH21
catcggacggtttggaacgattctctacagatctgacgaacgcctggtagatttcggtttctgcgcttgcgacggcggtggttgtctgatcggaagactt	26548000
----------->ARR10 ------>NtERF2 <------NtERF2 <---------ABI4(1) <------ZmHOX2a(1) ------>NtERF2 ----------------->AGL1 ----------->HVH21 ----------->ARR10 <-----------------AGL1 ----------->ARR10 <------NtERF2 <-- ------->GAMYB <------ZmHOX2a(1)<------ZmHOX2a(1)<------NtERF2 ----------->ARR10
ggtgagaagaacaacgacgatggagttcccgaggaggaaaacgaacagaggagtagatatgacggcggcgatacggcggagaaacgctccggagatttga	26548100
<---------ALFIN1 <------NtERF2 --------->ABI4(1) ------>NtERF2 <------------------SPL14 ------>NtERF2 ---------->DOF2 <---------ALFIN1 <-------GAMYB --------ID1 ---------->DOF2 <-----------ARR10 ----------
acgacgaaaggaagttgcgaaaatgtccaaaagatgaagagtagagcgacgcaaacctccgccgcacggaagaaacggccaattctacagaagcggttga	26548200
<------NtERF2 ------>NtERF2 <----------DOF2 ------ ->GT1 <----------DOF2 ------->TEIL ---------->DOF2 -
aacgccgcaacgccttggctttctctgctttcacgttatcgaaatcaaacgaatccattgcgatttgcgagtgcaagaacagagagaaagagaaagattg	26548300
*TSS ------>ZmHOX2a(1) ----->GT1 --------->ALFIN1 <---------ALFIN1 <--- --------->DOF2 ---------->DOF2 <-------TEIL <----------DOF2 <---------ALFIN1 <----------DOF2
agaaaagaagaagaagaaaaagtggagcaagcttcgtctctcgcatctatcttttatagacacactccactcctaaaccagactcacttttttttttttt	26548400
<------------CBF <--------ATHB1 >>>>>>>>>GT-1 -------->HAHB4 <----------DOF2 <---------ALFIN1 --------GT1 <----------DOF2 ----------->GT1 <-------TEIL ------>ZmHOX2a(1) --
ttccttcaaataattgaactttttcttttatttatggttaatatatctaagttagatatacatattccatttattattcctcatgtagacaccacttgtg	26548500
---------->DOF2 --------------->AGL15 <---------------AGL15 --------->RAV1(2) <-----------GT1 <-----------GT1
cccctgctatattatatattatatccatttcaatattccaaaataaattcaaaattagcagtaatttactaatttttgtaaagtttagtgtaattttttt	26548600
---------->DOF2 ----------->GT1 ---------->DOF2 <----------DOF2
atgtaatcaaatcaatagaataaaattcaaaaaagtcaattaaattttgcaagggtatagtagcatatcattttttaaactttgtgtaaaaagtatcaaa	26548700
---------->DOF2 <-----------GT1 ------->TEIL <------ZmHOX2a(1)
accatttttaccaaaacaaagtagcatgaaccatacttgtatacaaatggagtatagctgaacaatactcttctataatttaaggaaacaaatttgatat	26548800

AGI:	At5g66440.1
Description:	similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34560.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45849.1)
Range:	from: 26547461	to: 26548323	Orientation: Reverse
Links:	TAIR MIPS

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