Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            -----------                                                                                         --------->DAG2                                                                                        ---------->DOF2                                                   --------->YAB1            --------->TOE2(3)                                             --------->ANAC46               --------->ANAC58                                             --------->ANAC58               --------->ANAC58                                             --------->ANAC58               <---------bZIP60(1)                                      <---------ARR11(3)                    --------->bZIP60(1)                <-----------GT1       --------->ARR11(3)                    --------->ANAC55(2)    <-            <---------YAB1            --------->AHL20(1) <----------DOF2    <---------ANAC46       --         <---------YAB1              --------->AHL20(2)  <---------DAG2     <---------ANAC55(2)------   acatttgtaagattattgttacatttttgttaattacaaatatataccagcaataacaacttttctatttctcttgttacgtcaatgtgaaaaagtaaaa  26102100                                  <-----------GT1                           <---------WOX13(1)                         <--------ATHB1                         <---------ICU4                         --------->ATHB51                         --------->ATHB12                         -------->HAHB4                        <---------YAB1                        <---------AHL20(2)                        <---------ATHB51                        --------->ICU4                                          <---------DAG2                      --------->YAB1                                            <----------DOF2 >GT1                <XXXXXXXXXXXXXXXXXXXXXXXMIR829.1                          <---------ANAC58    -- --------AHL20(2)    <---------YAB1             <---------GLK1(2)    --------->ZAT6               <-- ------->AHL20(2)   --------->AHL20(2)        --------->AHL20(2)  <-----------GT1                 <-- --->ICU4           <---------AHL20(2)    <---------YAB1   ------>NtERF2       <---------ANAC58  <---   attaaaaactgaagcatccgattttaataattggtatcacagttctgataaattctcactcggccgttttaccactcgattgctttattctctctaattt  26102200                                                                                                    -                                                                                             --------                                                                                           <---------SPL7                          ------------>CBF                                                <---------ANAC58           <---------ARR14(2)                                                        <---------ARR14(2)           --------->ARR14(2)                                       ------>ZmHOX2a(2)--------->ARR14(2) ------->ANAC55(2)   <---------GLK1(2)                    <---------ICU4            <---------GLK1(1) -------TOE2(3)<---------YAB1                    ---------->DOF2   <---------At4g35610    <---------ANAC58 -------TOE1(3)------>ZmHOX2a(1)      --------->ATHB12    =================HOX2a_HOX2a --------->TOE2(2) --------RAV1(2)  <---------WOX13(1) <---------YAB1       <------ZmHOX2a(1)         --------->GLK1(1)   caggtaatcttcgaatcctgcttgattcttcaatcttgtatgatttgatcagaaagttcaggattactgatctgatatgatgtgagaaatctgcgtacca  26102300                                                    ==========================MADS_MADS                                              <-----------GT1                          <------------CBF <---------MYB46(3)   <-----------TBP                    <-                   --------->ATHB12       <---------WOX13(1)  <----------DOF2                    <---                <---------ANAC55(1)      <------------CBF     <---------------AGL15             <----                <---------ANAC46        --------->ATHB12      <---------DAG2                 ------>NtERF2                <---------ANAC58       --------->ICU4         --------------->AGL15        <---------ANAC58                <---------ANAC58     <---------ANAC58        ========================================                --------->ANAC55(2)  <---------ANAC58        <-----------------AGL3        <---------ANAC58              <-----------GT1        <---------ANAC46     <-----------GT1              <------------CBF ----------->CBF<---------ANAC55(2) ---------->ID1  --------------->AGL15 ----------->HVH21<--------- ->SPL7<------------CBF <---------YAB1 <---------YAB1 <----------DOF2<---------LBD16  <---------AtLEC2   tcggcaatggattgttttacgtgattagaattgattttgtcgtgattgttacttctctttttagctttttatggggatgacaagttttgcattgcctcct  26102400                                                                           <------MYB83                                                                           <------MYB46(1)                                                                          <---------TOE2(3)                                                                          --------->MYB59      --------->ZAT14                                                 --------->ATHB12      <---------ZAT18                                                <---------AHL20(2) <--------P              <---------ANAC58                           <---------WOX13(1) --------MYB46(3)        <---------ANAC58                        <---------AHL20(2) ------MYB52(1)    <---------TOE2(2)                             --------->AHL20(2) ------DOF2     --------->YAB1                                  --------->AHL20(2)                  - ========MADS_MADS <---------TOE1(2)             <---------AtLEC2--------->AHL20(1)         <-------- --------AG    <---------ATHB12          <---------------------WRI1<------------CBF         <--------   ttggttagtaaactcaaatcatatgtttcttatgcagcaagttgtcgatttgaatgaagaaatgaaattaattgattaggttttagataattttgctgga  26102500                                  --------->At4g35610                                  <---------ZAT2                            <------MYB46(1)                            --------->At4g35610                            <------MYB83                           <---------MYB46(3)                           <---------DEAR3(1)                           <-----------RAV1(1)                          <---------ANAC58                          <---------ANAC58                   ------------>CBF                  <------ZmHOX2a(2)                                         --------->ANAC58       ---------->DOF2    <---------ANAC46       <---------At4g35610        --------->ANAC58 <---------ZAT14 <---------ARR11(3)          <---------REM1(1)       <---------ICU4 --------->REM1(2)--------->CCA1(2)       <---------MYB46(3)         --------->MYB52(1)         <---- --------->ZAT14 --------->ARR11(3) ----------->RAV1(1)             --------->ICU4       ------>MYB83 -------->ALFIN1 --------->AGP1   <---------At4g35610           <------ZmHOX2a(1)------>ZmHOX2a(2) -ANAC58        <---------GLK1(1) --------->ZAT2 --------->At4g35610<---------ATHB51     ------>MYB46(1) -ANAC58        --------->GLK1(1)----------->RAV1(1)            ========================HOX2a_HOX2a   gagtgtagagaaagagagagatccaatggctggtgcagcagcatttgttgaagctgataatgcagaggaaataatggcaaggatcgaaaccaaatcgcag  26102600                                                                           --------->YAB1                                                                           --------->ATHB51                               ---------->DOF2                            --------->ICU4                         <-----------GT1                      ----------->HVH21       <---------At4g35610  --------->TOE1(3)               --------->At4g35610       --------->At4g35610  --------->TOE2(3)               <---------At4g35610  <-----------GT1    ---------->DOF2   --------->YAB1                 <----------DOF2      <---------YAB1         ---- -----At4g35610    ----------->GT1     <----------DOF2    <-----------RAV1(2) <---------ICU4     <---   aagattgaaagcttactcaaacagtaataaccctaaagttccttttttcttccaactttctcagatgacctaggctataattgttacttcgttttattca  26102700                                             --------->TOE2(3)                                           ------>NtERF2           <---------AtLEC2               --------->ARR11(3)         --------->DEAR3(1)  <---------HSFB2a(1)               <---------ARR11(3)      --------->ANAC58       --------->HSFB2a(1)        <-----------HVH21              --------->ANAC58      ------->TEIL  ------>ZmHOX2a(1)   ------ ----->At4g35610                   <---------MYB46(3)  <---------ETT(2)<---------ARR11(3)   --------- ------At4g35610       --------->RAP2.6(3)<---------ALFIN1<---------MYB52(2)         ------>ZmHOX2a(1)   gctacaaacatgtcgaagctcttaaaacggctcttgatggttcgccacctaaaactctcgacgaacgttgcaaggtcctactgtttcctctaccatgcac  26102800                                             --------->ARR11(3)                              <-------                                             <---------ARR11(3)                  --------->ZAT18                                        <---------YAB1                           <---------ZAT14                                      --------->YAB1                       --------->MYB52(2)--------                        <---------GLK1(2)   --------->RVE1(1)   <---------ZAT2   --------->ZAT14                    ---------->DOF2  <---------YAB1             --------->At4g35610         <-------- ->TEIL      --------->ICU4       <---------AHL20(2)        <-----------HVH21    <---------ZAT18 >AtLEC2     <---------YAB1 ----------->GT1 --------->CCA1(1)   <---------At4g35610         <--------   ataagtagtttgttcatgatcaaaaagattgtgtaatttatgataaatatctgtgaaattgcagtcagctaattggatagttgtgcacagagctatcatg  26102900                    ----------->GT1              <---------TOE1(2)             <XXXXXXXXXXXXXXXXXXXXMIR870    <---------TOE2(3)                                                                --------->At4g35610  ---------->DOF2  ----------->GT1                                                   --------->ZAT2 --ICU4 --------->GLK1(1)              ------>NtERF2                        <----------DOF2 ->YAB1--------->ARR11(3)             <---------ANAC46                     <---------DAG2     <------ -ATHB12<---------GLK1(1)<---------GLK1(2)     --------->ANAC46       <---------ANAC58        ------- -YAB1<------ZmHOX2a(1)<---------AHL20(2)    <-----------GT1          <---------ANAC58     <---------   gcgataaaggatatcgaaggaatgttaaattctcttactgccgagtattacgacattctcatgaagtaagtctcttgccttttgctctgctagcttttaa  26103000  Previous    Next  AGI:  At5g65274.1    Description:  similar to CRK (CROOKED) [Arabidopsis thaliana] (TAIR:AT4G01710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73657.1); contains InterPro domain ARP2/3 complex 16 kDa subunit (p16-Arc); (InterPro:IPR006789) Range:  from: 26102526    to: 26103186    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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