AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
----------->HVH21 ---------DOF2 ----------->RAV1(1) --->ZmHOX2a(2) ------->TEIL ---------->DOF2 ---------->DOF2
tctttcagttctatgacatattgacatgtatcaatgttatgaaaagtgtcttccaacaaaagccgaaattaatttgattttgatttggtttctggttctc	22422800
<--------P ----------->GT1 <-----------GT1 <-------GAMYB <----------DOF2 <----------DOF2 <----------DOF2 ----------->GT1 <
taaaatcaaaattatataatttgcttttctatgtggaaatttaaattcttttgttacaaaataatcttttgttattttggttggtttggttaattttgtt	22422900
-------->HAHB4 <-------TEIL ----------->GT1 <----------DOF2 <---------------AtSPL3 ----------DOF2 <---------------AtSPL8 <-----------GT1
ttctttgctttaattatgcttggttatgttaggtacggttctagttctagtgtaaaaacattgttacgtttcagtttcaaaattctcgttctggtttcta	22423000
----- --------->O2 <----- <---------O2 ------- ------->GAMYB ---------->DOF2 <------------CBF ------>NtERF2 <-----------GT1 ----------->HVH21 <------ZmHOX2a(1) <------NtERF2 <------NtERF2 <----------DOF2 ------>ZmHOX2a(1) ---------->DOF2 ------>NtERF2 <---------AtLEC2
tatcaacttttaaccgacaagtgtccttgactcgttgtaaaggtgaaagtaggagctagagatggcaaacggtggcattgtcgtgtgtgcatgtccgcca	22423100
<-----------GT1 ------>ZmHOX2a(1) --------------->AGL15 <---------O2 ----------------->AGL1 --------->O2 ->NtERF2 ----------------->AG ----------->STF1 ----ALFIN1 ====================HOX2a_HOX2a ----------->TGA1 ---->HVH21 ------>ZmHOX2a(2) ----------->GT1 *TSS ----------->HVH21
cggagcatcaaaatgtttcgatcttctcttcttcctaatttgttaatttctattctcactgttgagagagagcagacagcagagagcaatgacgtcgatg	22423200
--------->ALFIN1 <------NtERF2 --------->ABI4(1) --------->ABI4(2) ------>NtERF2 <---------ALFIN1 ------>NtERF2 <-----------GT1 ----------->HVH21 --- <------ZmHOX2a(1) --------->ALFIN1 ----------->HVH21 ----------->HVH21 ------>ZmHOX2a(1)
gagaggatggagagagacgcaatggagacggtggctccatacgctcgggtgacttatcaccgccgtgttcgtggtgacttggatgacacacttcctaaac	22423300
------>ZmHOX2a(1) ----------->HVH21 ------ ------------>AtSPL8 -------->HAHB4 ----------->ARR10
cttgtacttcttcctaaacttctcttatacatattcaaatatattaatgatgcgtgactcatacgttacataacaattcttgattatttagatttgccga	22423400
----------->HVH21 ----------->RAV1(2) <----------DOF2 ---------->DOF2 <----------DOF2 ---------->ID1 >NtERF2 ------->TEIL <---------ALFIN1 <------ZmHOX2a(2) ----------->RAV1(1)
gagcactacaagcacctgacatggaacacccacaaggaacaccagatcatagacataatggccttagtgttcttcagcaacatgtcgctttcttcgattt	22423500
<-----------GT1 <-----------GT1 <--------ATHB1 ---------->ID1 ------->TEIL <------------ATHB5 <----------DOF2 <-------TEIL
ggacaataatggcatcatttatccctttgaaaccttctctggtaaactcttcaatctcttcatatgtatagttatgtacataccggtttatacatttact	22423600
<-----------ARR10 <------NtERF2 <-----------HVH21 <---------TGA1a <---------O2 --------->TGA1a --------->O2 ------->TEIL <-----------GT1
agtttgtgtatatttacataaacacgaatttgaattccaccagggttccggttactcggtttcaatttactcgcgtcgcttatcttggctgctggtatca	22423700

AGI:	At5g55230.1
Description:	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding. similar to microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana] (TAIR:AT4G26760.1); similar to 65kD microtubule associated protein [Daucus carota] (GB:CAD58680.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73840.1); similar to microtubule-associated protein MAP65-1a [Nicotiana tabacum] (GB:CAC17794.1); contains InterPro domain MAP65/ASE1 (InterPro:IPR007145)
Range:	from: 22419254	to: 22422718	Orientation: Forward
Links:	TAIR MIPS

AGI:	At5g55240.1
Description:	caleosin-related family protein / embryo-specific protein, putative. similar to ATS1 (ARABIDOPSIS THALIANA SEED GENE 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G26740.1); similar to caleosin [Brassica napus] (GB:AAY40837.1); contains InterPro domain Caleosin related (InterPro:IPR007736)
Range:	from: 22423152	to: 22424577	Orientation: Forward
Links:	TAIR MIPS

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