AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
----------->GT1 <----------DOF2 ----------->GT1 <---------------AtSPL8 --------------->AGL15 <---------------AtSPL3 < ->GT1 ----------->GT1 <---------------AGL15 <-------GAMYB <---------ALFIN1 <-------
tataaatctagtgatatatatatggtccctaaaactggtaaacaactttggttgtacagtaaatgtttttgtagagctacacataacatttacagcttta	22418900
-----------GT1 ----------->GT1 --- ---DOF2 >>>>>>>>>MYB2 <-----------ARR10 <-----------GT1 --------
aataaccataagttaacttggttagagaaaaccaaaaactattgaagcatccgagaatctagtggtgaattataacgatattattgcactgtaagaaaag	22419000
------->DOF2 ----------->GT1 ---------->DOF2 ----------->GT1 -->DOF2 ---------->DOF2 ----------->GT1 <<<<<<<<<WRKY18 ---------->DOF2 <---
aaaagaattaaaaaaaaaagtaaataacttgtgtggtcaaacaagcaaagaaccaagtcaaggaagagtaaaaaaagacacaagtctgtctgtgaacagt	22419100
<----- <---------ALFIN1 <---------ALFIN1 ---------->DOF2 <---------------AGL15 --------->PCF2 ----------->GT1 ----------->GT1 <---------PCF2 --------HVH21 ----------->GT1 --------------->AGL15 <------------CBF
gtcatgtttgtaaataaagaaggaaactaggggtgaatattttgctaattggagtttccatcgtacttcaaaaaaaaaaaacgattgggtcccacactca	22419200
---------->DOF2 ------>ZmHOX2a(1)<-----------GT1 ---------- ----ALFIN1 <---------ALFIN1 <-----------GT1 *TSS <-----------HVH21
cctctccgtctcttccacctccatagatagattttttttccttaagcaaaaaagattttatctcactctcaatagtgttagtattgtcacagagaaagct	22419300
------>ZmHOX2a(2) <- <------ZmHOX2a(2) <----- <---------AGP1 xxxxxxxxxxxxxxxx>smallRNA(i) --------->AGP1 ---------->DOF2 ---------->DOF2 -------- >DOF2 <-------TEIL <-----------GT1 >>>>>>>>>GT-2 <----------DOF2
tcagatctagaagaagaagcagagttcataaagagaaacccattttaaaccctagaaatcaagtgtcaatctcggtaattaaagtttatgcctttttctt	22419400
----------GT1 -----DOF2 ------>ZmHOX2a(1) -->ID1 <----------DOF2 <----------DOF2
tttactgttagatttgatcaattttgaggtctttagtctgttccttaaggttttgattgctttggttttatcaccaatgctgtccgattctcttgaagat	22419500
<----------DOF2 ------>ZmHOX2a(2) <<<<<<<<<RAP2.2 <------ZmHOX2a(2) <----------DOF2 --------->AGP1 <----------DOF2 ------>ZmHOX2a(2) <------
tctgttttttttgttcagagatctgcttcttctttctgtgctttgcttctgcttgatcggattttagatattgcattctgagcttgacttcgtttgcttt	22419600
----------->GT1 ----------->GT1 <-----------HVH21 ----DOF2 ---------->DOF2 <-------TEIL ----------->GT1
ctgtgtcatggtgaaaaaagggtttttgagcttcgtaagtcaaattttttgtttccgattcttaatgtttggtctgtggagtttaatctttggttagagt	22419700
<----------DOF2 <----------DOF2 ------->TEIL ---------->DOF2 <-----------ARR10 <-------TEIL
gattaagaggttttagattccgaaaaagattctaactttgattgagaatatctacagcgtatcttttggtgtttgttattgttttttcttagcttcgtaa	22419800

AGI:	At5g55230.1
Description:	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding. similar to microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana] (TAIR:AT4G26760.1); similar to 65kD microtubule associated protein [Daucus carota] (GB:CAD58680.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73840.1); similar to microtubule-associated protein MAP65-1a [Nicotiana tabacum] (GB:CAC17794.1); contains InterPro domain MAP65/ASE1 (InterPro:IPR007145)
Range:	from: 22419254	to: 22422718	Orientation: Forward
Links:	TAIR MIPS

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