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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                     --------->YAB1
                                                                  <---------ICU4
                                                                  --------->YAB1
                                                                 --------->ICU4
                             <---------ANAC46<----------DOF2   --------->YAB1
                 <---------ANAC58        --------->WRKY38(1)  <---------ATHB12          <----------DOF2
                 <---------ANAC58        --------->WRKY12     <---------ATHB51  ------>ZmHOX2a(1)  -
 
ggtcatagtcatacactcttacttgtttagttgtttggaaagagttgacttttgtaatcccttcaataataatcatctatctcctaattctcttttcaac  21545800
                 -------->HAHB4
                 --------->ATHB12
                 <--------ATHB1
                --------->ICU4
                <---------YAB1
              <---------ICU4
              --------->YAB1
             <---------AHL20(2)
         <---------AHL20(2)
         --------->AHL20(2)
     --------->AHL20(2)
     <---------AHL20(2)                        --------->YAB1
 --------->AHL20(2)                  --------->AHL20(2)                           --------->WOX13(1)
--------->ARR11(3)                --------->AHL20(2)    --------->AHL20(2)       <---------AHL20(2)
<---------AHL20(1)               <---------AHL20(2)     --------->YAB1----------->GT1
--------->AHL20(1)               --------->AHL20(2)  --------->YAB1  --------->LBD16              --
<---------ARR11(3)        --------->YAB1     <---------ARR11(3)    --------->At4g35610            <-
-------->YAB1<---------ATHB51--------->AHL20(2)<---------ICU4    ---------->CDC5 --------->AHL20(2)
 
aaaaatatttatataaataatgattcaaataatcaaataaataaacaaaatcataacaataatatagcacagcgggataaacaattaatcaacttagttt  21545900
           --------->AHL20(2)
           <---------AHL20(2)   <<<<<<<ZML2   <----------DOF2
          --------->ICU4     <---------HSFC1(1)
       <---------AHL20(2)    --------->HSFC1(1)                                                 ----
     --------->ANAC55(2)     --------->HSFB2a(2)   <---------YAB1                     --------->WOX13(1)
------------->AGL15          <---------HSFB2a(2) --------->YAB1      <---------YAB1 <---------ATHB12
--------------AGL15      <----------DOF2      <---------DAG2       --------->YAB1   <---------YAB1
 
tgcattttaagtaattttttggataattctttctagaactcaattctcacttttataattcgattttctcttataatcccaaaacttatcattcaagtga  21546000
                                                                                 --------->KAN4(2)
                                                                                <---------HSFB2a(1)
                                                                                <---------KAN4(1)
                                                                                --------->KAN4(1)
                                                                                --------->HSFB2a(1)
                                                                                <---------HSFC1(2)
                                                                 <-----------TBP--------->HSFC1(2)
                                                                 --------->AHL20(2)               --
                                                    <----------DOF2         --------->ANAC58      --
                                                 <---------ARR11(3)         --------->ANAC58      <-
                                                 --------->ARR11(3)    --------->ANAC46           --
                                       --------->CCA1(2)       <-----------TBP <---------KAN4(2)  --
                    ------>ZmHOX2a(1) <---------ARR11(3)  <-----------GT1   <---------MYB52(2)    --
  <---------YAB1 ------>ZmHOX2a(1)    --------->ARR11(3) <-----------GT1<-----------HVH21        <--
--->TEIL     <-----------GT1<----------DOF2  --------->ANAC46 <----------DOF2  ------->TEIL  <------
 
atcttatttttgtgattttcctccttctcttcttttacagagatatactcgaaatcttttttacccttttatataggtcacgaacattctatccatcttt  21546100
                                                                 --------->ANAC55(2)
                                                                 <---------ANAC55(2)
                                                                 <---------ANAC46
                                                                 <---------ANAC58
                                                                 <---------ANAC58
                                                            <---------ICU4
                                                            --------->YAB1
                                                            --------->ATHB12
                                                           <---------YAB1
                                                           --------->ICU4
                                                       <---------AHL20(2)
                                                       --------->AHL20(2)
             --------->ANAC58                         --------->YAB1
             --------->ANAC58                         --------->AHL20(2)
             --------->ANAC46                    <---------AHL20(2)
       --------->CCA1(2)           <---------AHL20(2) <---------AHL20(2)
------->ANAC55(2)               <---------AHL20(1)--------->AHL20(2)              ------>MYB83
------->ANAC58                  --------->AHL20(2)<---------YAB1 <---------ANAC55(1)------------>CBF
--------ANAC55(2)               --------->AHL20(1)<---------AHL20(2)              ------>MYB46(1)
------->ANAC46                --------->AHL20(1) --------->AHL20(1)              --------->WOX13(1)
------->ANAC55(1)             <---------AHL20(1) --------->AHL20(2)     <----------DOF2       ------
------->ANAC58                <---------AHL20(2) <---------AHL20(1) <-------TEIL--------->AtMYB61
-------TOE2(3)           --------->At5g28300  --------->YAB1-------->HAHB4     ------------>CBF-----
----DOF2<-------TEIL    ----------->GT1       --------->AHL20(2)--------------->AtSPL3   --------->YAB1
 
tacgtaatagatacacacacaaaaatacagtaaaatattttaaaacgaataatataattaaaatgattacgtacactttgggaccaatccaattacaaaa  21546200
                                        --------->AHL20(2)
                                  ------>MYB46(1)
                                  ------>MYB83
                             ------>MYB83
    <-----------TGA1         ------>MYB46(1)
    <-----------HVH21      --------->MYB46(3)                   <---------YAB1
   <---------bZIP60(1)     <---------MYB46(2)                  --------->ARR11(3)
   --------->bZIP60(1)     <---------MYB111(1)                 <---------ARR11(3)
   <---------ANAC58       --------->ANAC58                 --------->AHL20(2)
   <---------ANAC58       --------->ANAC46                 <---------AHL20(2)
---->DOF2                 --------->ANAC58                --------->AHL20(2)
---->DAG2   <----------DOF2--------->AtMYB61       <-----------GT1              <-----------GT1    -
 
agggtttcgtcactgctttagtttccaacaccaaaccaaacaaaaaaatggatttaacaaaattaatatcattctctctcttgtttctatctcttctaat  21546300
                                                         ------>NtERF2
                                                        --------->bZIP60(1)
                                                        <---------RAP2.3(3)
                                                        <---------RAP2.6(2)
                                                        <---------bZIP60(1)
                                                       --------->RAP2.6(3)
                                                      --------->MYB52(1)
           ------>NtERF2                          <------NtERF2
          --------->DEAR3(1)                     ------>NtERF2                                  ----
        ------>NtERF2                        <---------MYB46(3)                                -----
       --------->DEAR3(1)                    <-----------RAV1(1)                               -----
     ------>NtERF2                  --------->MYB52(1)--------->REM1(2)                       ------
    --------->DEAR3(1)   <---------MYB52(1)  --------->MYB52(2)                   --------->LBD16
  ------>NtERF2         <-----------HVH21  <---------MYB52(1)   <------ZmHOX2a(2)<---------ANAC46
 --------->DEAR3(1) <---------ALFIN1---------->DOF2  ----------->HVH21           <---------ANAC58
--------->SPL7<---------ALFIN1--------->AtLEC2 ---------->ID1   <---------ATHB12 <---------ANAC58
----->NtERF2  --------->AtMYB61   <---------MYB52(2)<-----------HVH21  <---------MYB52(1)    -------
 
cccgacgacgacgacgaccacttccaccgttacatgcactaacgccgtttgtcgccgtgacggcccgatcatccgttttccattccgtctaaaacaccaa  21546400
                                                                   --------->TOE1(3)
                                                                   --------->AtMYB61   <---------MYB52(1)
                                                                   --------->TOE2(3)   --------->At5g28300
                                                   <---------LBD16 --------->YAB1     --------->LBD16
                --------->ANAC58                 --------->ANAC46-------->P          <---------HSFB2a(2)
    <---------YAB1  ---------->DOF2            <-----------GT1 --------->MYB46(3)    --------->HSFB2a(2)
----->MYB46(3)  <----------ID1       --------->TOE1(2) ----------->HVH21            <---------LBD16
->MYB46(1)      --------->ANAC58     --------->TOE2(2)--------->At5g28300       <---------MYB52(1)
->MYB83     <-------GAMYB           <---------ANAC58  <---------MYB52(1)    <---------DOF5.7(2)
----->RAV1(1)<---------ARR14(2)     <---------ANAC58 <---------DEAR3(2)     <---------At5g28300   --
-->AtMYB61 <---------MYB46(3)     --------->MYB52(1) --------->LBD16      --------->DOF5.7(2)  <----
 
caatctcattcttgtggttacgacaaaggcttcgacttaacgtgcgatattaacgccggtaacagaacaaccataacgttaccgttttccggtaacttca  21546500
                                                                           <---------At4g35610
                                                                           --------->At4g35610
                                                                     ------>ZmHOX2a(2)
                                                                    <------ZmHOX2a(2)
                                                                   <---------ARR11(3)
                                                                   --------->ARR11(3)
                                                                   <-----------ARR10
                   --------->ZAT2                                  <---------AGP1
                   <---------ZAT2                                  --------->ARR14(2)
                   --------->At4g35610           --------->MYB52(1)------->TEIL                  <--
                   <---------At4g35610          --------->MYB46(3) <---------ARR14(2)          <----
                  ------->TEIL          ------->GAMYB       ------>ZmHOX2a(1)                 <-----
               <---------ANAC55(2)     <---------MYB52(2)   ===============HOX2a_HOX2a       ------>NtERF2
               --------->ANAC46        --------->MYB46(3)   ================HOX2a_HOX2a     <-------
               --------->ANAC55(2)  <---------WRKY12       --------->TOE2(3)                --------
        <------ZmHOX2a(2)    --------->CCA1(2)--------->ANAC46--------->MYB52(1)  --------->TOE2(3)
------->LBD16  --------->ANAC58    <------ZmHOX2a(2)------->GAMYB <---------ARR14(1)        --------
-----At5g28300 --------->ANAC58    ================================HOX2a_HOX2a    --------->TOE1(3)
 
ccgtggaagagatcgattacgcagctcaagagatttggatcaacgacccaaacaactgtcttcctcaacggatcttacagctaaacctcaactcgacgcc  21546600
                                                                                  <---------ANAC58
                                                                                  <---------ANAC46
                                                                                  <---------ANAC55(2)
                                                                    --------->At4g35610
     <---------ANAC58                                   <-----------------AGL1    --------->ANAC55(2)
     <---------ANAC46  <---------DOF5.7(2)           <---------GLK1(1)            <---------ANAC58
     <---------ANAC58 --------->ZAT14               <-----------ARR10<---------MYB52(1)   <---------ANAC58
-------MYB52(1)     --------->At4g35610             <---------ARR14(2)          <---------DOF5.7(2)
-----ANAC46         <---------At4g35610             <---------ARR11(3)        --------->DOF5.7(2)
-NtERF2         <-----------HVH21        ------>ZmHOX2a(1)          <-------GAMYB <---------ANAC55(1)
--DEAR3(1)     <---------ANAC58     ------->GAMYB   --------->ARR14(2)   --------->ARR14(2)  -------
->ANAC46       <---------ANAC58  <-----------GT1    --------->ARR11(3)   <---------ARR14(2) <-------
->DEAR3(1)    <-------TEIL    <----------DOF2<---------ZAT14       <---------MYB46(3)     <---------ANAC58
 
gtttagtggcgtttacatgcgtcagttcacgttctttaactgtcctacttcagagtatctccgttttaggccgttgaatccgataacgtgtttgagtggt  21546700
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AGI:  At5g53110.1   
Description:  similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G46495.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79324.1)
Range:  from: 21546248    to: 21546970    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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