Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----  <---------MYB52(1)                                            --------->CCA1(2)                ---- -----TEIL             --------->At4g35610         ---------->DOF2 ----------->GT1              -----   tacagtttggccaaatagaagtctctgcttcagactagagctactcagaaatgttaagcgcataagatagggaaacatgttttcttcgaaatcgaataag  18867600                           ---------->DOF2                       --------->ARR11(3)                       <---------ARR11(3)             ------>ZmHOX2a(1)                                              --------->ANAC58            --------->TOE1(3)                                               --------->ANAC46            --------->TOE2(3)                                --------->ARR14(2)                     -      --------->AHL20(2)--------->CCA1(2)   ------>ZmHOX2a(1)<---------ARR14(2)            --------->At4g35610 ----->TOE1(3)       <---------TOE2(3)      <----------DOF2 --------->GLK1(1)             <---------TOE1(3) ----->TOE2(3)       <---------YAB1  <---------ICU4         <---------CCA1(2)   ---------->DOF2     < ---->At4g35610--------->AHL20(2)<---------YAB1 <----------DOF2             --------->ANAC58---------   cttaaattttaaatccttaaattaagatataaagtttgattatgtcctttctttgctgtagtatatccacatattcacacgagaaagttgctaagcttaa  18867700                                        --------->LBD16                                        ------>NtERF2                                       --------->ANAC58                                       ------->GAMYB                                       --------->ANAC46                                <-----------RAV1(2)                                       --------->ANAC58                                <---------LBD16        ---------->DOF2               --------->SPL7  <---------YAB1        ---------->DOF2   <----------DOF2                    --------->MYB46(3)                   --------->LBD16 -------->ARR11(3)         ---------->DOF2      <---------TOE2(3)         --------->LBD16 ---------ARR11(3)        <---------AHL20(2) <---------ATHB12             --------->ANAC46<------ZmHOX2a(1) >TOE1(3)                 --------->AHL20(2) --------->AHL20(2)   ---------->DOF2  --------->ICU4   gagttctttgaaaagtcttaagaagaaattaaagactccatccgccaataaatgttatttttgaaacacaaagaccccgaaagtaatgctcaggataaga  18867800                                                                              <---------ANAC58                                                                              <---------ANAC58                                          --------->YAB1                      <---------ANAC46                                          --------->ATHB12            <---------MYB52(1)                                         --------->ICU4              <-----------HVH21                                   <---------ZAT14                  --------->ANAC46                                <---------ANAC46               <---------HSFC1(2)                        ----------->HVH21<---------YAB1        --------->HSFC1(2)    ---------->DOF2   cttaagaggctatgaaacatttgtttgtgaccttgtgtatactatgattaagacatcaaattggaaacatccgtcaagttgcgtcggaaaagtctgagaa  18867900              <-----------RAV1(1)              <---------ANAC58              --------->ALFIN1                   <---------MYB52(1)              <---------ANAC46               --------->At4g35610              <---------ANAC58               <---------ZAT2          <---------ANAC58                   --------->ZAT2                --------->ANAC58          <---------ANAC58                   <---------At4g35610     --------->MYB46(3)  --------->YAB1      --------->ICU4<-----------GT1  <-----------HVH21     --------->ANAC58  ----------->GT1    --------->At5g28300   <-----------RAV1(2)    <---------CCA1(2)             -----   acaatggtgaatacttgtgtggccgtgattaagtcaagttacctctcagctgttatgtcaaatgttttatatccaccaagacagactccctacttctcct  18868000                                                                                                   --                --------->TOE2(3)                     ------>ZmHOX2a(1)                    --------->HSFB2a(2)    ------>ZmHOX2a(1)                              ------>ZmHOX2a(1)                       <---------HSFB2a(2)   *TSS   <-----------GT1                      <-----------GT1             <---------ANAC58--------->HSFC1(1) ->ZmHOX2a(1)   --------->YAB1     <------------------------ANAC81         <---------ANAC58<---------HSFC1(1)   ctattcctcttcttacaatctcaatctccatagtctttgttcttagttttctcctcctctcactctctctctctatggcttcttcatcttcttctcgaaa  18868100                                                     --------->LBD16                                         --------->LBD16                                        <---------ANAC58                                        <---------ANAC46                                    <---------TGA1a <---------ANAC55(2)                                    ====================================bZIP_DOF                                    <---------O2    <---------ANAC46                        <-----------RAV1(2)  <-----------GT1 <----------DOF2                    <---------At4g35610 <---------ANAC58     <---------DAG2                    --------->At4g35610<-------TEIL --------->ANAC55(2)               <---------ANAC58     --------->O2    <---------ANAC58              <---------ARR14(2) --------->GT1 <---------ANAC58     --------->TGA1a <---------ANAC58           ------>ZmHOX2a(2)<----   ttggttatatgatgttttcttgagcttcagagggggagacgtccgtgtaacattccgtagccactttctcaaggagttcgatcggaaactgatcactgct  18868200                                                       <------ZmHOX2a(2)                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                                          ------>ZmHOX2a(2)                 <---------AtMYB61                                         <------ZmHOX2a(2)                  --------->ALFIN1                                         ==========================HOX2a_HOX2a                                        --------->ARR11(3)          --------->ARR14(2)                                        --------->ARR14(2)          <---------ARR14(2)                     --------->ANAC58   <---------ARR11(3)          <---------GLK1(2)                     --------->ANAC58   <---------ARR14(2)  <------ZmHOX2a(1)<---------MYB46(3)         --------->YAB1   <---------ALFIN1=========================HOX2a_HOX2a ------DOF2  <------ZmHOX2a(2) <----------DOF2   --------->TOE1(2)--------->LBD16   ttcagagacaatgagatcgagagaagccactctctttggcccgatcttgaacaagcgatcaaggactccagaatcgcagtggtcgttttctccaaaaact  18868300                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              =======                                                                                              -------                                                                                              =======                                                                                              =======                                                                                           ----------                                                                                           <---------                                                      <---------AHL20(2)                ------>ZmHOX2a(1)                                                     --------->AHL20(2)               ------>ZmHOX2a(2)                                                  --------->YAB1                      --------->HSFC1(2)                                                 <---------YAB1                       <---------HSFC1(2)                                                 --------->ICU4                       --------->HSFB2a(1)                                          --------->At4g35610                        <------ZmHOX2a(2)                                          <---------At4g35610                       <---------ARR14(2)                                        <---------ZAT14                          --------->ALFIN1                                        --------->ZAT14         --------->MYB52(1)  --------->ARR14(2)                                        --------->ZAT18   --------->YAB1       <---------ANAC46    --         --------->ZAT2      <---------ANAC46    <---------ATHB12   <---------MYB52(1)<---------HSFB2a(1)         <---------At4g35610 <---------ANAC58<---------ZAT14 --------->YAB1    --------->ALFIN1   ---         <---------ZAT2      <---------ANAC58--------->ZAT14<---------YAB1 <---------LBD16 ----------   acgcttcatcgagctggtgtcttaacgagttgctggagattgtgaactgcaatgataaaattatcataccggttttctacggtgtggatccttcccaagt  18868400                            <----------DOF2                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                         <---------ARR11(3)                         --------->GLK1(2)                         --------->ARR14(2) ---O2                   <---------ARR14(2) ---TGA1a                --------->ARR11(3) -->TGA1a               <------ZmHOX2a(1) ==========================bZIP_DOF -->O2                 <---------HSFC1(2) ===========================================bZIP_DOF                                  --------->WRKY12 ======================================bZIP_DOF                     <<<<<<<<<<<<<<<<<LFY ------->AGL1          <---------HSFB2a(1)                    ----------->GT1         --------->WRKY45 --------AGL1          --------->HSFB2a(1)                  ----------->GT1           --------->WRKY38(1) --------->GT1         --------->HSFC1(2)                 <------ZmHOX2a(1)          --------->DOF5.7(2) ------>MYB59   <----------DOF2      <-----------------------TaNAC69(2)        ---------->DOF2 ------->AG ----------->HVH21    ---------->DOF2   --------->MYB52(1)  --------->MYB52(1)        <---   gaggtatcaaatcggtgactttggaaggatctttgaaaagacttgcaagagacaaacagaggaagtgaaaaaccaatggaagaaagcgttgactcttgta  18868500  Previous    Next  AGI:  At5g46490.1    Description:  disease resistance protein (TIR-NBS class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to disease resistance-like protein [Brassica rapa] (GB:AAV74409.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain NB-ARC; (InterPro:IPR002182) Range:  from: 18868003    to: 18870089    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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