AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<<<<<<<<<ARR1 <----------DOF2 -DOF2 <----------DOF2 <<<<<<<<<ARR2 ----------->GT1 ---------->DOF2
gccatctatcgctactttctatatcacaagtgatacaaacaatcttagctatagtatcgtaattagctttcaaatcatataatatatagaaagagatatt	15152300
------>NtERF2 <-----------GT1 <------ZmHOX2a(1) ------->TEIL <---------ALFIN1 <-----------RAV1(1) <-----------GT1 <------ZmHOX2a(1) --------->ALFIN1 <-------TEIL <------ZmHOX2a(1)
tgttatatcattgttacttacttgataagaggaattgtggatgtaactgtgcggaccatcaccaccgttcataggaaacgattgaggaaatgttggcatt	15152400
<---------TGA1a ========================================bZIP_DOF --------->O2 <---------O2 --------->TGA1a <---------ALFIN1 <----------DOF2 ------->GAMYB <------NtERF2 ==================MYC_MYB ------>NtERF2 ------->TEIL ===============================bZIP_DOF ---------->ID1 ---------->DOF2 <----------DOF2 <------------OsbHLH66 <-----------RAV1(1) ---------->DOF2
tctctttgtttttcaacgacccccacgtgtttcatctctccatatgtttgtcgccttaattaaaattaacatgtaaagaaaaagatgaatatgcatatgc	15152500
<-----------GT1 ---------->DOF2 ----------->GT1 ---------- ---------->DOF2 <---------------AtSPL8 ----------->GT1 - ----------->GT1 --------------->AtSPL8 ---------->DOF2 <--
ctgctaaacaataaactgaaaatgacattgaaaaaaaaagaaagagagagagagggagagtacaatattcacataatcccaaaagtataaatcaagaaaa	15152600
---------->DOF2 <---------------AGL15 --------------->AGL15 <-----------------AGL1 ----------------->AGL2 ----------------->AGL1 ->GT1 ----------->HVH21 ---------->RAV1(2) ----------->HVH21 ---------GT1 ----------->TGA1 ---------->DOF2
taacctgatgcccacaatgctgactactggtgaagctatagcaatagctgacgcatgacccaaaaaggcactcaacattgtttcttagaggcgagagaaa	15152700
<------ZmHOX2a(1) ----------->GT1 ----------->GT1 ----------->GT1 <------ZmHOX2a(1) <----------ARF1 <----------ID1 --------->ALFIN1 <----------DOF2 *TSS <------------CBF <-----------TBP --------->ALFIN1 ---
acaaactttaggagaattggttattgtttttgggtatgaagaattggaagacaagaagtttatataaggactaagagagggaagcgtgggggataaaaaa	15152800
----------->GT1 ------>NtERF2 <---------ALFIN1 ------>NtERF2 <---------PCF2 <---------PCF5 <-------GAMYB --------->PCF2 ----------->GT1 <-----------GT1 <--------- ------>ALFIN1 <-----------GT1 <-----------GT1 ----------->GT1
ctggggccacctcgtaatttatattaacgtctagtgttaataatctatatataactcattttacaatttctattaacatatagtgttaattttctgttgg	15152900
<-------TEIL -- <---------ALFIN1 ------>ZmHOX2a(2) <----------TaMYB80 <------ZmHOX2a(2) --RAV1(1) <----------DOF2 ------>ZmHOX2a(1) <-------TEIL -----
agtaattttctcttaagatactttagttcaaggatatcctccacataggttcatacacgaactacattactagtttttagaagaggttcggacgatccga	15153000
----------->GT1 <------ZmHOX2a(1) --------->GT1 ----------->HVH21 <-----------GT1 ----->DOF2 <----------DOF2 ----------->GT1
aagctaaaaattgtagaattttctttgacaggattagtagttctataagaaggttttacgttttttcatttagcataatcgacatccaatacatatctag	15153100
---------->DOF2 <----------DOF2 ------>ZmHOX2a(1) ----------------->AGL1 <----------DOF2 ---------->DOF2 --------->AtLEC2 <-------TEIL <---------PCF5 <-----------GT1 ------>ZmHOX2a(1)
cttcctgcaaaaaaattagatgcattaaaccaaaaccgggaccaagaagcacttataaactttttctaaacctcctagacaaaagctttataaaatatgc	15153200

AGI:	At5g37990.1
Description:	S-adenosylmethionine-dependent methyltransferase. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G37970.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299)
Range:	from: 15150967	to: 15152730	Orientation: Reverse
Links:	TAIR MIPS

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