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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
1 10 20 30 40 50 60 70 80 90 100
<-------
TEIL
--------
------>
DOF2
----------->
GT1
----------->
GT1
------>
ZmHOX2a(1)
aaagattcatcgtctactagttcttcgtagataacatagtatatctagaaaactcggaacgaaaattttataaaatgtggataaacgtgaagtcctaaag
15148200
--
---------->
DOF2
<-----------
GT1
<------
-->
DOF2
----------->
GT1
<------
ZmHOX2a(1)
<--
ctagcaaagaaatttggtcaaacgttagtttattaatttctctcaaaatattagctatttagtaatattacccaattatataaggatagacaaatgttac
15148300
----------->
RAV1(1)
<----------
DOF2
------>
P
<---------
ALFIN1
-----
GT1
--------->
ALFIN1
---------
GT1
<----------
DOF2
----------->
GT1
<------
NtERF2
ttacccaacaatatttcaaatagatgctttgtttctacttgatgcattgttataatgaagtggccgctcctttttttttattttgtcaaacattataatg
15148400
--------------->
AtSPL8
<-----------
GT1
<---------------
AtSPL8
----------->
GT1
<--------
ATHB1
<--------
P
<----------
DOF2
-
aaataatgaagtatgtttttggagaacaaaaatgttgtaaaattaccaataatttgggtagtggagttggtgtacactttaggcttatattccattaact
15148500
<-----------
HVH21
<-----------
TGA1
<---------
TGA1a
--------->
O2
=============================
bZIP_DOF
>>>>>>>>>>
HY5
--------->
TGA1a
<-----------
STF1
----------->
STF1
<------------
CBF
<---------
O2
----------->
GT1
----------->
TGA1
----------->
STF1
------------>
CBF
<----------
DOF2
---------->
TGA1
-------->
ATHB1
----------->
HVH21
<-----------
GT1
*
TSS
taatgacgttacttgtaatcattgtccaatcagtgacgtcatatatgattttccttttgttaatcttttcaactgttatgactgggtga
aggaaattatc
15148600
<-----------
RAV1(2)
-------->
P
-------->
P
---------->
ID1
----------->
TGA1
------->
GAMYB
--------->
O2
atcttcgtccctaccaaatttttcagcagcgaaa
atggcaaacatcagcgtagtgacgacagcgactaacaaccaggtgattctccgtaactacgtgagt
15148700
<-------
GAMYB
------->
GAMYB
<---------
ALFIN1
<-----------
ARR10
<---------
ABI4(2)
<-------
TEIL
-------->
P
------>
ZmHOX2a(2)
------>
NtERF2
<------
ZmHOX2a(2)
---------->
DOF2
<------
NtERF2
------->
TEIL
<-------
GAMYB
ggattccctaaagaatccgacctctacatcgccgcaaccaccgttgacttacgtgtacctcccggatccatggcggttctagtcaagaatctctacttat
15148800
----------->
RAV1(2)
<-----------
HVH21
<---------
ALFIN1
------>
ZmHOX2a(1)
----------->
HVH21
<-----------
HVH21
---------->
DOF2
<----------
DOF2
----------->
GT1
<-----------
TGA1
----------->
GT1
<------
ZmHOX2a(2)
<---------
AtLEC2
<-----------
HVH21
<-----------------
AGL1
cttgcgatcctttcagccgcattcgcatggaaaaacccgacccttcgtcacctgcttccgtcgctcgcgcttactctatcggcaag
gtataaaagaatgt
15148900
<----------
DOF2
----------------------->
TaNAC69(2)
<----------
DOF2
---------->
DOF2
<
------->
TEIL
<-----------
RAV1(1)
--------->
ALFIN1
<----
atacattacgaatcttttagctttatagttcacttagatttcattgtgttgtgtttcttgtag
ccaatctctggatttggagtggctaaagcaatagatt
15149000
--------->
AtLEC2
<----------
DOF2
-----------
HVH21
<------
ZmHOX2a(1)
----------->
ARR10
<-----------
GT1
---
TEIL
<-----------
GT1
<-----------
GT1
----------->
GT1
------>
ZmHOX2a(1)
<---
catgtcatccaaattacaaaacaggagatttactttggggaagagttggatgggaagagtatagtgttattactccaactccttcttcacatttcaagat
15149100
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AGI:
At5g37980.1
Description:
NADP-dependent oxidoreductase, putative. similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G37940.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G38000.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61471.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085)
Range:
from: 15148590
to: 15150315
Orientation: Forward
Links:
TAIR
MIPS
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