Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ----------->GT1                          --------->ANAC58                               --------->AHL20(2)                          --------->ANAC58                               <---------AHL20(2)                     --------->WOX13(1)                                <---------AHL20(2)         --- --------CCA1(2) <---------GLK1(1)                                     --------->AHL20(2)       <---- >MYB83          --------->GLK1(1)                            <---------MYB52(1)               <----- >MYB46(1)    ------->GAMYB --------->AHL20(2)               <-------GAMYB                  <-------- -GT1      ----------->RAV1(1)   <-----------GT1            <---------MYB46(3)      ---------->DOF2   catctctctcttccaacagaaatccatcaagaaaataacttcttcttggttctctctcttggctgttatctatatatatatagagagaaagagacttttg  8938300                                                                   ----------->HVH21                                                                 <---------MYB46(3)                                                                --------->ALFIN1                                                                <---------ANAC46                                                                <---------AtMYB61                                                              <---------MYB46(3)                                                             <---------AtMYB61         --------->ANAC55(2)                                 <---------DEAR3(1)         <---------ANAC55(2)                                 --------->ALFIN1    <---------------AtSPL8                                 <---------MYB46(3)    <---------ICU4                                        <---------DEAR3(1)    <---------------AtSPL3                                <---------AtMYB61   --------->ICU4                                         --------->ALFIN1 -------->GT1                <---------HSFB2a(2)        <---------MYB46(3) -----ANAC46             <---------ARR14(2)            --------->ALFIN1                      -------- ----AtMYB61   <---------MYB46(3)                      <---------AtMYB61                <------ZmHOX2a(1) --DOF2 <-------TEIL     --------->ARR14(2)            <---------ZAT6 --------->ZAT6---------->DOF2   gtgtaataagtacgtattggttaagagaatacgagaagggtttgtagtatagaagtagtggtggtggtggtgacactaattaagaacaaaggacagaaag  8938400                                                                       --------->ANAC55(2)                                                           --------->DAG2          --------->YAB1                           ----------->GT1       --------->At5g28300   <---------ANAC55(2)                   <-------MYC3                 ----------->GT1       --------->MYB59<---------YAB1 -->DOF2           ------->MYC3       ---------->DOF2     ---------->DOF2  ---------->DOF2   aacaatttgacattgatggcatatggagtaagtaaaaaaaaaaagagagatggtaaaaaaaaaagttttagttaagtaaaagtatttataatggattttt  8938500                                                                                     ------>ZmHOX2a(2)                     ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                    <------ZmHOX2a(2)                         ------------------------>ANAC81                   --------->ARR11(3)                       ---------->DOF2        <---------ARR11(3)                   <---------ARR14(2)              ------->TEIL                    --------->AGP1                   <---------ARR11(3)              <---------ARR14(2)              --------->ARR11(3)               ---------->DOF2        <---------TOE2(3)<---------At4g35610        <---------GLK1(1)        <---------GLK1(2)   ---------->DOF2        --------->ARR14(2)    ---------->DOF2  ----------->GT1  --------->ARR14(2) <---------TOE1(3)--------->At4g35610        --------->GLK1(1)   tgaagagaaatattctctaaagatcggaatcaaagaggttagggtttggattgaatctgctgaaaaggagggagagaaagagagagatcttatccaaatg  8938600                                   <---------YAB1                  <------ZmHOX2a(1)   --------->GLK1(1)                                   <---------ANAC46            --------->LBD16    <---------LBD16         ---------->DOF2  --------->CCA1(2)                  <---------LBD16      --------->MYB52(1)         <---------ZAT14--------->CCA1(2)              <---------ZAT6*TSS    --------->ZAT14 --------   agaagaatgagtaaagagagtgagagagataagcgttgtgtttgtgttttgatgagagtgtaaaccggaggatgatcagagaactacgggtctcttaaat  8938700                                                                                           <---------YAB1                                                                                         --------->YAB1                                                                                         -------->HAHB4                                                                                        --------->ICU4                                                                         <---------ANAC46<---------ICU4                                                                  <---------WOX13(1)  --------->YAB1                                                                 <------------CBF    <---------YAB1                                                                --------->ATHB12     --------->AHL20(2)                ---------->DOF2     --------->MYB52(2)         <---------YAB1        <---------AHL20(2)  --------->AtLEC2            <------------CBF             --------->TGA1a       --------->AHL20(2) -->DOF2       <------ZmHOX2a(1)  <---------MYB52(1)       <---------TGA1a       <---------AHL20(2)   cgccattcaaacttataggaaagagagagagagattgttagttttgatgtgactatctctcatgtgtgattgattatgtgtatttatataattatgagtg  8938800                                             <---------AHL20(2)                                            --------->AHL20(2)                  <---------ARR11(3)                                         <---------AHL20(2)        <-----------GT1                                        --------->AHL20(1)       <---------GLK1(1)       <---------AHL20(2)            --------->AHL20(2)  <---------DAG2         --------->ARR11(3)      --------->AHL20(2)         ----------->GT1    <---------GLK1(1)   ----------->RAV1(2)     <----  <---------ARR11(3)         <---------TOE2(3)      --------->GLK1(1) <---------ALFIN1          -----  --------->AHL20(1)    ----------->GT1 <---------AHL20(1)<----------DOF2       <---------GLK1(2)   tgtatatattatatatgtgtgaaaaatggttaagaaagtttatatatttaatggagttcccttttgaatttcccacctgtaagattttggtgttccacta  8938900                          --------->GLK1(1)                      <---------HSFB2a(2)           <---------YAB1         --------->MYB52(1)                  --------->TOE2(3)     <---------TOE2(3)                --------->MYB46(3)                  <---------DAG2     <---------WOX13(1)                 -------->P         <----------DOF2  <---------GLK1(1)        <---------AHL20(1)   <<<<<<<<<<<<<<<<<LFY    <-----------GT1   --------->HSFB2a(2)<---------REM1(1)         --------->YAB1 -----ZAT14    <-----------GT1     --------->ATHB12--------->AHL20(1)  --------->WOX13(1) ---->ZAT14  <----------DOF2 --------->TOE2(3)    --------->ICU4  <---------YAB1  <------NtERF2   <--   tacttttgactctttctttaccttatggaaatctcaaagattgatgtaagtaatatttttgttttcttatgatcaaccaatggctgcatactatgagttt  8939000                  ----------->GT1      --------->AHL20(2)                                            ----------->GT1      <---------AHL20(2)                                     <---------At4g35610            ---------  --------->AHL20(2)                                         --------->At4g35610     <---------LBD16  <---------AHL20(2)              <---------AHL20(2)       <-----------RAV1(2)      --------->MYB52(1) -------YAB1    <---------ZAT14   --------->AHL20(2)     <-----------HVH21        ---------->DOF2   -   atttttaattaatatgagtttagtaaatagagtagattaattgtatatttttctaggtatgtcagatgaatagctaaatagccgaatagcggaataactg  8939100                                                  <---------YAB1                                                --------->YAB1                                                --------->AHL20(2)                                               --------->ICU4                                               <---------YAB1                                             <---------ICU4                                             --------->YAB1                                            --------->AHL20(2)                                            <---------AHL20(2)                                            <---------ATHB51                                            --------->ICU4                          <-----------GT1                                           <---------AHL20(1)                  <---------KAN4(2)                                          --------->YAB1                      --------->YAB1                                     ----------->GT1              --------------->AGL15        --------->At4g35610          <---------ANAC58          <---------ARR11(3)<---------ICU4  --------->ICU4                     <---------ANAC58          --------->ARR11(3)--------->YAB1 >MYB52(1)                           <---------ANAC55(2)       --------->GLK1(2)--------->KAN4(1) ---------->GT1                      <---------ANAC46  --------->ZAT6<---------ZAT6 --------->YAB1   aatagttattagctaaacgaattgaactagagaatagtttcgtaaaataattataaaacactaaaaatctagttttagtagaataatcacattttgtttt  8939200  Previous    Next  AGI:  At5g25620.1    Description:  YUC6 (YUCCA6); monooxygenase. similar to YUC2 (YUCCA2), FAD binding / NADP binding / flavin-containing monooxygenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G13260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44076.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain Monooxygenase, FAD-binding; (InterPro:IPR002938) Range:  from: 8935112    to: 8938669    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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