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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------
DOF2
-->
GAMYB
--------->
TOE1(3)
--->
MYB46(3)
<------
NtERF2
--------->
At4g35610
--------->
TOE2(3)
->
P
<----------
DOF2
<---------
ANAC58
<<<<<<<<<
GT-1
<------
ZmHOX2a(1)
>
MYB46(3)
<---------
MYB59
<---------
ANAC58
<-----------
GT1
<-----------
GT1
---------->
DOF2
gctttgagtcttttgggccgaactcgtgaagcattgcttctcatgagctag
cttaaccttctcatatgggatttaccttcacaagagacttaaagaggag
3633300
<---------------
AGL15
<---------
YAB1
------>
ZmHOX2a(1)
======================================
MADS_MADS
--------->
GLK1(2)
--------->
ARR11(3)
----------->
GT1
<---------
GLK1(2)
<---------
GLK1(1)
--------------->
AGL15
--------->
YAB1
--------->
GLK1(1)
--------->
WOX13(1)
<-----
tttcttaaacagaatttgtagataatacattctgaattcaagagcccatttgatatcctgattttggaatagcaatctgctatgtattgtaaatgtagag
3633400
<---------
DAG2
<---------
AHL20(1)
<---------
MYB46(3)
<---------
AHL20(2)
--------->
MYB52(2)
--------->
AHL20(1)
<---------
ARR14(2)
--------->
AHL20(2)
--------->
ARR14(2)
--------->
AHL20(2)
<------
NtERF2
<---------
GLK1(2)
<---------
AHL20(2)
--------->
At5g28300
<---------
MYB52(1)
----
ZAT6
--------->
YAB1
<----------
DOF2
--------->
YAB1
<-------
GAMYB
ttgagaattgactaaaataaattcaattactttttaggcggt
atctcagttttcatattctcagttagttgttgttgttgttgttgttgttgttgttgtt
3633500
--------->
YAB1
----------->
GT1
<---------
HSFB2a(2)
--------->
GLK1(2)
--------->
ARR14(2)
--------------->
AGL15
<---------------
AGL15
<-----------------
AGL3
----------------->
AGL3
<-----------
GT1
----------------->
AG
--------->
TGA1a
----------------->
AGL1
<---------
TGA1a
<-----------
HVH21
--------->
HSFB2a(2)
--------->
O2
------->
GAMYB
<---------
ARR14(2)
<---------
O2
--------->
ZAT6
<---------
CCA1(2)
<---------
ANAC58
<---------
REM1(1)
<-----------------
AGL1
<---------
ANAC55(2)
<---------
ANAC46
<-----------------
AGL2
<---------
ANAC58
<------
MYB46(1)
----------------->
AGL2
=========================
<------
MYB83
<---------
TOE1(2)
<---------
MYB52(2)
<---------
ANAC46
<-----------
HVH21
--------->
MYB46(3)
<---------
LBD16
<---------
ANAC55(1)
gttgttgttgttgtcaagtctatttggtgtaacagtcgcatgtcccaaatctggaaacaaacaaaatatagaacagagacgtgtattttcgatactcgag
3633600
*
TSS
---------->
DOF2
--------->
ARR14(2)
<<<<<<<<<
TBF1
--------->
YAB1
<---------
ARR14(2)
<<<<<<<<<
TBF1
<---------
AHL20(2)
<---------
At5g28300
<---------
GLK1(1)
<<<<<<<<<
TBF1
<
--------->
AHL20(2)
--------->
AHL20(2)
<-----------
HVH21
<---------
AHL20(2)
<<<<<<<<<
TBF1
<----
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ZAT6
--------->
AHL20(2)
------>
ZmHOX2a(1)
-----
====================
bZIP_DOF
---------->
DOF2
------------>
CBF
<-----------
GT1
=======================
tttttttttaataaaagcatcttaaaaaattagtaaagagttactgtcaaacaatattcgtttaatt
acaaatccgagtccttcttcttcttcttcttct
3633700
<----------
DOF2
<---------
SPL7
--------->
HSFC1(2)
<---------
ANAC58
------->
TEIL
<---------
HSFB2a(1)
<---------
ANAC46
<---------
CCA1(2)
---------->
DOF2
--------->
ARR11(3)
--------->
MYB52(2)
------>
ZmHOX2a(2)
<---------------
AGL15
------>
ZmHOX2a(2)
<---------
TOE1(2)
---------
GLK1(1)
--------------->
AGL15
--------->
YAB1
<---------
ANAC58
-----
HSFB2a(2)
<---------
ICU4
--------->
HSFB2a(1)
<---------
ANAC58
---------->
ID1
---->
HSFB2a(2)
<------
ZmHOX2a(2)
<---------
HSFC1(2)
<---------
ANAC58
--------->
ZAT6
<----------
DOF2
=======
HOX2a_HOX2a
--------------->
AGL15
<---------
ARR11(3)
<---------
MYB52(1)
<-----------
GT1
cgatctctgtatctctcgatcatttccttctaaaggaagcgtctttgatcttaatcgtcgtgtcgttcgtttctaact
gtaagttttctccttttcattc
3633800
<---------
GLK1(2)
--------->
ARR14(2)
<---------
ARR14(2)
<------
ZmHOX2a(1)
<---------
YAB1
<---------
LBD16
<---------
ANAC58
--------->
ANAC58
<---------
GLK1(1)
--------->
ARR11(3)
<---------
ANAC55(2)
--------->
GLK1(1)
<---------
ARR11(3)
----------->
GT1
<---------
GLK1(2)
---------->
DOF2
<---------
At4g35610
--------->
ANAC58
<---------
ARR11(3)
--------->
DAG2
--------->
At4g35610
------>
ZmHOX2a(2)
<----------
DOF2
------>
ZmHOX2a(1)
<---------
ANAC58
--------->
TOE2(3)
attttgcttcaatctcgatcggaatcaagtaaaaaatcggaacttttacctagatttcctcaggaatcgaaaagttcttgtgatttagcagaacctctat
3633900
<---------
ANAC58
<---------
YAB1
<---------
ANAC58
<-----------
GT1
--------->
ANAC58
--------->
ANAC55(2)
--------->
ANAC46
<---------
ANAC55(2)
<----------
DOF2
--------->
ANAC58
------>
ZmHOX2a(2)
<---------
YAB1
<---------
ARR14(2)
<------
ZmHOX2a(2)
--------->
DAG2
<-------
GAMYB
---------->
DOF2
--------->
MYB52(1)
--------->
GLK1(1)
---------->
DOF2
<-----------
RAV1(1)
--------->
ARR14(2)
tgtttccgatctcttaattcaattacttgacaaaagtgattatactttctctgttgcag
ttatattgaaag
atggaaacagaaacggaacatgatagaac
3634000
==================================
------>
ZmHOX2a(2)
===================================
<---------
GLK1(1)
<------
ZmHOX2a(2)
--------->
GLK1(1)
<---------
ARR14(3)
-----
--------->
ARR14(3)
------
---------->
DOF2
<---------
ARR11(3)
------
------->
GAMYB
--------->
ARR11(3)
------->
TEIL
--------->
ANAC46
<-----------
ARR10
---------
------->
GAMYB
--------->
ANAC58
<---------
ARR14(2)
<--------
--------->
MYB46(3)
--------->
ANAC58
<----------
DOF2
<----------
DOF2
<---------
YAB1
----------->
HVH21
----------->
RAV1(2)
---------->
DOF2
--------->
ARR14(2)
--------->
ANAC58
<---------
ETT(2)
------->
TEIL
--------->
MYB52(1)
<---------
AGP1
--------->
ANAC58
tgtctctgtcgatgacaacgacagccttgtacctgagccaagctcaacgaaagaaagcttttttgaagatctctcgcttactgggcaagttatgaatcct
3634100
--------->
ZAT14
<---------
ZAT18
<---------
ZAT14
--------->
ALFIN1
<----------
DOF2
==
HOX2a_HOX2a
==
HOX2a_HOX2a
<
->
ZmHOX2a(1)
-
--->
TOE1(3)
--------->
TOE2(3)
=
--->
TOE2(3)
<----------
DOF2
--------->
YAB1
=
>
ARR14(2)
---------->
DOF2
<---------
ANAC58
--------->
WOX13(1)
<---
-
ARR14(2)
<-----------
RAV1(2)
<---------
ANAC58
--------->
WRKY18(1)
------
caactttcaagtgcaggcgaagttttgacaaaagttgaattggattttgcttttgtctctgagaaattggtcaatcttagtcttcttactatgcaactcg
3634200
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AGI:
At5g11380.1
Description:
DXPS3 (1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3); 1-deoxy-D-xylulose-5-phosphate synthase. similar to CLA1 (CLOROPLASTOS ALTERADOS 1) [Arabidopsis thaliana] (TAIR:AT4G15560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44179.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula] (GB:CAD22530.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var. lobata] (GB:AAQ84169.1); contains InterPro domain Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; (InterPro:IPR009014); contains InterPro domain Transketolase C-terminal-like; (InterPro:IPR015941); contains Inter
Range:
from: 3629999
to: 3633442
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At5g11390.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68910.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67491.1)
Range:
from: 3633668
to: 3636571
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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