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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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---------DOF2
-->GAMYB                                                                --------->TOE1(3)
--->MYB46(3)   <------NtERF2              --------->At4g35610           --------->TOE2(3)
->P   <----------DOF2           <---------ANAC58                     <<<<<<<<<GT-1           <------ZmHOX2a(1)
>MYB46(3)     <---------MYB59   <---------ANAC58  <-----------GT1    <-----------GT1   ---------->DOF2
 
gctttgagtcttttgggccgaactcgtgaagcattgcttctcatgagctagcttaaccttctcatatgggatttaccttcacaagagacttaaagaggag  3633300
                                                      <---------------AGL15
                                                      <---------YAB1
                                                      ------>ZmHOX2a(1)
                                                      ======================================MADS_MADS
         --------->GLK1(2)                        --------->ARR11(3)               ----------->GT1
        <---------GLK1(2)                        <---------GLK1(1)          --------------->AGL15
     --------->YAB1                              --------->GLK1(1)   --------->WOX13(1)       <-----
 
tttcttaaacagaatttgtagataatacattctgaattcaagagcccatttgatatcctgattttggaatagcaatctgctatgtattgtaaatgtagag  3633400
                          <---------DAG2
              <---------AHL20(1)                                 <---------MYB46(3)
              <---------AHL20(2)                              --------->MYB52(2)
              --------->AHL20(1)                    <---------ARR14(2)
              --------->AHL20(2)                    --------->ARR14(2)
             --------->AHL20(2)     <------NtERF2   <---------GLK1(2)
             <---------AHL20(2)     --------->At5g28300     <---------MYB52(1)
----ZAT6   --------->YAB1 <----------DOF2        --------->YAB1<-------GAMYB
 
ttgagaattgactaaaataaattcaattactttttaggcggtatctcagttttcatattctcagttagttgttgttgttgttgttgttgttgttgttgtt  3633500
                                                         --------->YAB1
                                                ----------->GT1
                                               <---------HSFB2a(2)
                                            --------->GLK1(2)
                                            --------->ARR14(2)
                                         --------------->AGL15
                                         <---------------AGL15
                                        <-----------------AGL3
                                        ----------------->AGL3                     <-----------GT1
                                        ----------------->AG               --------->TGA1a
                                        ----------------->AGL1             <---------TGA1a
                              <-----------HVH21--------->HSFB2a(2)         --------->O2
                             ------->GAMYB  <---------ARR14(2)             <---------O2
                            --------->ZAT6 <---------CCA1(2)               <---------ANAC58
                       <---------REM1(1)<-----------------AGL1             <---------ANAC55(2)
                     <---------ANAC46   <-----------------AGL2             <---------ANAC58
                     <------MYB46(1)    ----------------->AGL2             =========================
                     <------MYB83  <---------TOE1(2) <---------MYB52(2)    <---------ANAC46
        <-----------HVH21   --------->MYB46(3)<---------LBD16              <---------ANAC55(1)
 
gttgttgttgttgtcaagtctatttggtgtaacagtcgcatgtcccaaatctggaaacaaacaaaatatagaacagagacgtgtattttcgatactcgag  3633600
                                                                   *TSS
         ---------->DOF2                                           --------->ARR14(2)     <<<<<<<<<TBF1
     --------->YAB1                                                <---------ARR14(2)  <<<<<<<<<TBF1
    <---------AHL20(2)                <---------At5g28300         <---------GLK1(1) <<<<<<<<<TBF1  <
   --------->AHL20(2) --------->AHL20(2) <-----------HVH21<---------AHL20(2)     <<<<<<<<<TBF1 <----
   <---------AHL20(2) <---------AHL20(2)<---------ZAT6    --------->AHL20(2) ------>ZmHOX2a(1) -----
====================bZIP_DOF  ---------->DOF2 ------------>CBF<-----------GT1=======================
 
tttttttttaataaaagcatcttaaaaaattagtaaagagttactgtcaaacaatattcgtttaattacaaatccgagtccttcttcttcttcttcttct  3633700
                                       <----------DOF2      <---------SPL7
                                  --------->HSFC1(2)       <---------ANAC58
      ------->TEIL                <---------HSFB2a(1)      <---------ANAC46
     <---------CCA1(2)     ---------->DOF2 --------->ARR11(3)  --------->MYB52(2)
------>ZmHOX2a(2)      <---------------AGL15 ------>ZmHOX2a(2)<---------TOE1(2)
---------GLK1(1)       --------------->AGL15 --------->YAB1<---------ANAC58
-----HSFB2a(2)  <---------ICU4    --------->HSFB2a(1) <---------ANAC58              ---------->ID1
---->HSFB2a(2) <------ZmHOX2a(2)  <---------HSFC1(2)  <---------ANAC58  --------->ZAT6 <----------DOF2
=======HOX2a_HOX2a    --------------->AGL15<---------ARR11(3)<---------MYB52(1)    <-----------GT1
 
cgatctctgtatctctcgatcatttccttctaaaggaagcgtctttgatcttaatcgtcgtgtcgttcgtttctaactgtaagttttctccttttcattc  3633800
                                                                                       <---------GLK1(2)
                                                                                       --------->ARR14(2)
                                                                                       <---------ARR14(2)
                                                           <------ZmHOX2a(1)<---------YAB1
                                                        <---------LBD16 <---------ANAC58
                       --------->ANAC58           <---------GLK1(1)   --------->ARR11(3)
                       <---------ANAC55(2)        --------->GLK1(1)   <---------ARR11(3)
                       ----------->GT1           <---------GLK1(2)---------->DOF2  <---------At4g35610
                       --------->ANAC58          <---------ARR11(3)--------->DAG2  --------->At4g35610
               ------>ZmHOX2a(2)       <----------DOF2 ------>ZmHOX2a(1)<---------ANAC58  --------->TOE2(3)
 
attttgcttcaatctcgatcggaatcaagtaaaaaatcggaacttttacctagatttcctcaggaatcgaaaagttcttgtgatttagcagaacctctat  3633900
                     <---------ANAC58                                                  <---------YAB1
                     <---------ANAC58 <-----------GT1                           --------->ANAC58
                     --------->ANAC55(2)                                        --------->ANAC46
                     <---------ANAC55(2) <----------DOF2                        --------->ANAC58
      ------>ZmHOX2a(2)            <---------YAB1                            <---------ARR14(2)
     <------ZmHOX2a(2)       --------->DAG2     <-------GAMYB  ---------->DOF2--------->MYB52(1)
     --------->GLK1(1)      ---------->DOF2    <-----------RAV1(1)           --------->ARR14(2)
 
tgtttccgatctcttaattcaattacttgacaaaagtgattatactttctctgttgcagttatattgaaagatggaaacagaaacggaacatgatagaac  3634000
                                                                  ==================================
                                                                  ------>ZmHOX2a(2)
                                                                 ===================================
                                                                 <---------GLK1(1)
                                                                 <------ZmHOX2a(2)
                                                                 --------->GLK1(1)
                                                                <---------ARR14(3)             -----
                                                                --------->ARR14(3)            ------
                                             ---------->DOF2    <---------ARR11(3)            ------
                                            ------->GAMYB       --------->ARR11(3)         ------->TEIL
                                           --------->ANAC46     <-----------ARR10          ---------
               ------->GAMYB        --------->ANAC58            <---------ARR14(2)         <--------
              --------->MYB46(3)    --------->ANAC58  <----------DOF2    <----------DOF2<---------YAB1
        ----------->HVH21  ----------->RAV1(2)   ---------->DOF2--------->ARR14(2) --------->ANAC58
     <---------ETT(2)     ------->TEIL   --------->MYB52(1)     <---------AGP1     --------->ANAC58
 
tgtctctgtcgatgacaacgacagccttgtacctgagccaagctcaacgaaagaaagcttttttgaagatctctcgcttactgggcaagttatgaatcct  3634100
        --------->ZAT14
        <---------ZAT18
        <---------ZAT14
       --------->ALFIN1
<----------DOF2
==HOX2a_HOX2a
==HOX2a_HOX2a                                                                                      <
->ZmHOX2a(1)                                                                                       -
--->TOE1(3)                                                            --------->TOE2(3)           =
--->TOE2(3)                                   <----------DOF2          --------->YAB1              =
>ARR14(2)                 ---------->DOF2    <---------ANAC58       --------->WOX13(1)          <---
-ARR14(2)<-----------RAV1(2)                 <---------ANAC58     --------->WRKY18(1)         ------
 
caactttcaagtgcaggcgaagttttgacaaaagttgaattggattttgcttttgtctctgagaaattggtcaatcttagtcttcttactatgcaactcg  3634200
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AGI:  At5g11380.1   
Description:  DXPS3 (1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3); 1-deoxy-D-xylulose-5-phosphate synthase. similar to CLA1 (CLOROPLASTOS ALTERADOS 1) [Arabidopsis thaliana] (TAIR:AT4G15560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44179.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula] (GB:CAD22530.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var. lobata] (GB:AAQ84169.1); contains InterPro domain Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; (InterPro:IPR009014); contains InterPro domain Transketolase C-terminal-like; (InterPro:IPR015941); contains Inter
Range:  from: 3629999    to: 3633442    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At5g11390.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68910.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67491.1)
Range:  from: 3633668    to: 3636571    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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