AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
================HOX2a_HOX2a <------ZmHOX2a(2) <----------DOF2 <-----------HVH21 ------>ZmHOX2a(1)
aaaattggccaagactacgagtttacttttggtgataacatttggcaaacgactagtttctcatgtcaaatggatcagggtcctaattttaagcatcacc	1221100
<-----------RAV1(1) ---------->DOF2 <-------TEIL -
tagattttgtggcatatgagacttcgtggagcaaagctcttgaagcttcgtgtaagtggataggtagagaagatggaatctatttttctcaagatggagt	1221200
=== --- ------>ZmHOX2a(1) <---- ---------->DOF2 ------>ZmHOX2a(2) <------- ---------->DOF2 ===================================HOX2a_HOX2a <-------GAMYB ----->ZmHOX2a(1) ------>ZmHOX2a(1) ----------->ARR10 <----------DOF2
tcctcccaccaaaaagtaccaagatggagttcctcccaccaaaaagtaccaatgggatgatcctcattgaaaattagagttttatattatctttggttga	1221300
------->TEIL ===================HOX2a_HOX2a --------------->AtSPL8 --->ZmHOX2a(2) ------>ZmHOX2a(2) -----AGP1 <---------AGP1 -P ------>ZmHOX2a(1) <----------DOF2 <-----------GT1 ---------->DOF2 <-------
tctgaagaattggtcctcatatgaaaattagggttttatattctttggtggatctttgtacctcttattatgaataaagttatcgataaaattttcttta	1221400
---------->DOF2 ----------->TBP <------ZmHOX2a(1) <-------TEIL --------------->AGL15 ----------->TBP ----------->GT1 ---DOF2 <----------DOF2 ----------->GT1 ----------->HVH21 ---------->DOF2
ataacaaacattccattgatatggatttctttgaaaggataagtagttatataaatacgtgaaagatataagaaatttgagggactaaagagcaaaaata	1221500
*TSS -------->P ----------->RAV1(2) ----------->HVH21 <----- <-----------HVH21 ----------->HVH21 ----------
tagatattttgaagaacaaacggtcgaagaacatctgaaactatcatcaatcggagaagaagaagaatggcactgacactgacaccaacaagttccgttc	1221600
<------NtERF2 <-----------HVH21 <---------TGA1a --------->TGA1a --------->O2 <---------O2 <------NtERF2 ------>NtERF2 ------>NtERF2 <----------TaMYB80 ----------->HVH21 <------ZmHOX2a(2) <------NtERF2 <-----------ARR10 ------>NtERF2 <------NtERF2 =============HOX2a_HOX2a --------->ALFIN1 --TEIL ------>ZmHOX2a(1) <---------ABI4(1) <-----------HVH21 ----->AtSPL3 <-----------HVH21 ------>ZmHOX2a(2) ------>ZmHOX2a(2) ------>NtERF2
atcttctcagttccatatccgtcgcgcgtcctcggatcttcgccgctgattttaatcttcgatcgcggtggcgacgtcgtcggcctgttacgtcaatttc	1221700
<-----------HVH21 <-----------RAV1(1) ------>ZmHOX2a(1) <----------DOF2 <----------DOF2 <
taacttccgtctcagacttccttcgaaaacttcgcttcactgtctctgttcttcgtcttccgcttcatctcctatgtcgctcgaagtctccagtcccaat	1221800
<------ZmHOX2a(2) <-----------GT1 ------>ZmHOX2a(2) <-----------GT1 <-----------GT1 <--------P <----------DOF2 -----------RAV1(2) <-----------GT1 <-------TEIL <-----------GT1 <-----------GT1
tctcaggtttacccctcttaattttcgagctagaaggttgatcgatcatgttactggttttgctctttttaacgttttgtgtcaaaattttggtcagttt	1221900
<----------DOF2 <-----------RAV1(1)<-----------GT1 ------>ZmHOX2a(2) <---------AtLEC2 ----------->GT1 ----
cttgattgtttgatctattcaagagcgtattgggttacccaaggcgtgattgcatggaatgtggatgttggtgaagggtcttgttacttttacgcgagca	1222000

AGI:	At5g04350.1
Description:	self-incompatibility protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04347.1); similar to self-incompatibility [Papaver nudicaule] (GB:CAA06689.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264)
Range:	from: 1220830	to: 1221270	Orientation: Forward
Links:	TAIR MIPS

AGI:	At5g04360.1
Description:	ATLDA/ATPU1 (PULLULANASE 1); alpha-amylase/ limit dextrinase. similar to ATISA3/ISA3 (ISOAMYLASE 3), alpha-amylase [Arabidopsis thaliana] (TAIR:AT4G09020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68873.1); similar to H0806H05.4 [Oryza sativa (indica cultivar-group)] (GB:CAC09471.2); similar to pullulanase [Spinacia oleracea] (GB:CAA58803.1); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193); contains InterPro domain Alpha-1,6-glucosidases, pullulanase-type; (InterPro:IPR011839); contains InterPro domain Immunoglobulin E-set (InterPro:IPR014756); contains InterPro domain Glycosyl hyd
Range:	from: 1221531	to: 1228612	Orientation: Forward
Links:	TAIR MIPS

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