AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<----------DOF2 ---------->ID1 <----------DOF2 <----------DOF2 ------->TEIL <------ZmHOX2a(2)<-----------GT1 -
gtgaagttcacgtatgtgtgtctgatgaagatcatttctttgttttttttcttttctttataatttgaataaaattggtcactgtagaaatctgactcta	1220400
--------->ALFIN1 <-------GAMYB <------NtERF2 <---------ABI4(1) ---------->CDC5 --------------->AtSPL8 --------->ALFIN1 <------NtERF2 --------------->AtSPL3 <--------ATHB1 -------->ALFIN1 ------->GAMYB <-----------GT1 -------->HAHB4
atgtgtgcgtaagaagtgtgtaacgctcggcggtggagcttatgttacaatccgtacttcattattctgtctgtgataagaaataataataattgaatat	1220500
<---------------AGL15 ------------>CBF ------------>CBF ---------->DOF2 <-----------GT1 <-----------GT1 --------->AtLEC2 ------------>CBF <-----------------AGL3 ------------>CBF
gtagcctagttttatgcaaaagttttgaatgttttcaatttacaatccaactaaaaacggaacaacatctcaaacaatttacaataaaatcaaagattta	1220600
<---- >>>>>>>>>MYB98 <---------------AGL15 ----------->GT1 <----------DOF2 --------------->AGL15 <----------DOF2 ---------->DOF2 <-----------GT1 <---------ALFIN1 ----------->GT1
tattctttatctcagattacgttttaatttcataaaaagtaacataagaaattatacctttttggattcaacactgtttcattttttggttaaaatatta	1220700
------------>CBF <-----------GT1 ----------->GT1 <-----------GT1 -------GT1 ------------>CBF ---------->DOF2 <---------AtLEC2 ----------->TBP
tcatcccatatcgtctcaattttccttgttagcacaaagaaataacatcaaaacctattttcatgaaataaaatgtgaatataaatataacaatagatta	1220800
<- <-----------GT1 ------------>CBF <----------DOF2
agtctattccccaaatttatcacgagaaaatgaacaatctcttcatattttcgattgttattggcttatgcattggcgtaagcaatgcttttcacgagat	1220900
<-----------------------TaNAC69(2) ---------->DOF2 <-------TEIL ------>ZmHOX2a(2) ---------->DOF2 ---------->DOF2 <------ZmHOX2a(2) -----ZmHOX2a(1) ------>ZmHOX2a(1) ---------->DOF2
aggagaaagcaaagtcgtgttaagcaatcaattggaacacagcaaactcctcaaagttcattgtcgttccaaagacgacgatcttggggagcatattttg	1221000
================HOX2a_HOX2a <------ZmHOX2a(2) <----------DOF2 <-----------HVH21 ------>ZmHOX2a(1)
aaaattggccaagactacgagtttacttttggtgataacatttggcaaacgactagtttctcatgtcaaatggatcagggtcctaattttaagcatcacc	1221100
<-----------RAV1(1) ---------->DOF2 <-------TEIL -
tagattttgtggcatatgagacttcgtggagcaaagctcttgaagcttcgtgtaagtggataggtagagaagatggaatctatttttctcaagatggagt	1221200
--- === ------>ZmHOX2a(1) <---- ---------->DOF2 ------>ZmHOX2a(2) <------- ---------->DOF2 ------>ZmHOX2a(1) ----------->ARR10 <-------GAMYB ----->ZmHOX2a(1) ===================================HOX2a_HOX2a <----------DOF2
tcctcccaccaaaaagtaccaagatggagttcctcccaccaaaaagtaccaatgggatgatcctcattgaaaattagagttttatattatctttggttga	1221300

AGI:	At5g04347.1
Description:	similar to self-incompatibility protein-related [Arabidopsis thaliana] (TAIR:AT5G04350.1); similar to self-incompatibility [Papaver nudicaule] (GB:CAA06689.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264)
Range:	from: 1219829	to: 1220613	Orientation: Forward
Links:	TAIR MIPS

AGI:	At5g04350.1
Description:	self-incompatibility protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04347.1); similar to self-incompatibility [Papaver nudicaule] (GB:CAA06689.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264)
Range:	from: 1220830	to: 1221270	Orientation: Forward
Links:	TAIR MIPS

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