Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->bZIP60(2)                     --------->ANAC58            --------->At4g35610                                             ----------->GT1       --------->DAG2--------->ANAC58                                   --------->MYB52(1)      ---------->DOF2--------->ANAC46                            ----------->GT1 -----DEAR3(1)----------->HVH21                      ------>ZmHOX2a(1)  <-----------GT1          ----   gctggagttaaagcggatgacacaagccatggcacatactgtttagacattcttcctctctctgagacagaaaataactggtttatagaggtctcttaag  1052200                                                                       <------ZmHOX2a(2)                                                                       ==========================HOX2a_HOX2a                                                                       --------->CCA1(2)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                      --------->AGP1                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                     <---------GLK1(1)                                                                     --------->GLK1(1)                                                                 --------->LBD16  <---------ANAC58                                                                --------->HSFB2a(2)                                          --------->ZAT2        <---------HSFB2a(2)       --------->LBD16                                  --------->ZAT6       <---------AHL20(2)         <---------ANAC46                                --------->SPL7<------MYB83 <---------ATHB12       <---------ANAC58                              --------->LBD16 <------MYB46(1)   <-----------RAV1(2)       ------>ZmHOX2a(1)   <---------ZAT6            <---------ANAC55(2)       --------->AHL20(2)    <---------ICU4 ----->ARR11(3)              --------->ANAC55(2)   ----------->GT1 <------ZmHOX2a(1)     --------->TOE1(2)   ctctagtggtaatagaccattttgtgatgctccgtaacacaacaagcttggtcttgtttaaatcatccaggagatccaagtattgcttgttcctgagagt  1052300                                         --------->ANAC46                             <---------AHL20(2)                          --------->TOE2(3)            <---------ANAC58                        <-------TEIL     --------->ANAC58                        ------->TEIL     --------->ANAC58                                           <                    --------------->AtSPL8             <---------ANAC58                      ------>ZmHOX2a(1)                    <---------------AtSPL8 ---------->DOF2                            <---------ARR11(3)                 <---------GLK1(2)    <---------ARR14(2)                              --------->ARR11(3)         ----------->RAV1(1)--------->AHL20(2)      <---------GLK1(2)   ------->TEIL  <-----------GT1   tactacaaatgcaacaatagattatgtacattaatttgtatatacgaaagtccaaattcttgctcataagaatgaatgttcaatgtattatcttcctctt  1052400                                    <---------AHL20(2)                                   <---------AHL20(2)                                   --------->AHL20(2)                                 --------->TOE2(3)                                <---------ICU4                                --------->ATHB12                                <--------HAHB4                               <---------YAB1               --------->ATHB12    <---------HSFB2a(2)        --------->ICU4        --------->ANAC58    --------->HSFC1(1)       --------->YAB1          --------->ANAC58             ----------------->AGL1    <---------HSFC1(1)       <---------ICU4        <------ZmHOX2a(1)              ------------>CBF  -    --------->HSFB2a(2)   --------->YAB1          <----------ID1                 ------>NtERF2     -- ----------DOF2       <-----------GT1            <---------TOE2(3)              <---------PCF2 ------   cactttctagagaaaattgatgaattactcatcatcattaatttgcaatttaaggacgaaattgatttgaaggggattaatggggccaatttggaaaatg  1052500                                           ---------->DOF2                                  --------->ALFIN1                                <---------O2                                <---------TGA1a                                <---------ANAC46                                --------->O2--------->DAG2                                <---------ANAC58                                <---------bZIP60(2)                                <---------ANAC58             ------------>CBF   ======================bZIP_DOF              <----------DOF2 <---------AHL20(2)            ----------->STF1              --------->ANAC46  *TSS             <---- --------->AHL20(2)            <-----------------------TaNAC69(2)     <---------ATHB12        <------NtERF2 -------->YAB1                <---------TGA2(2)   <---------ANAC58   ------>MYB46(1)        <-------- --------->TBP               ----------->HVH21    <---------ANAC46   ------>MYB83  ------>NtERF2<---- ----->GT1 <---------PCF2    ----------->TGA1     <---------ANAC58------------>CBF--------->DEAR3(1)   tataaaaatagtgggagcaatacagaaatagatgacgtggatgctaaaagtagcgtggtcttcacaacaccaatctttctttcgcctccctccgtcgtcg  1052600                              --------->TOE1(3)                             ----------->GT1                          ---------->DOF2       ----------->GT1--------->LBD16                                <---------AHL20(1)             <   <---------TOE2(3) --------->HSFB2a(2)                --------->YAB1        ---------->DOF2       - -------HVH21        <---------HSFB2a(2)       ----------->GT1       --------->AHL20(1)           --- -DEAR3(1)      <---------ANAC58            --------->AtLEC2         --------->AHL20(2)           <-- -------TGA1    <---------ANAC58          <---------AtLEC2           <---------AHL20(2)          ----   tcaccaaggtagaaaatttcgttccagagaaagcttaaaactttccatggagaaaaaatcataaaactcaattaattgtagaaagagactgagagaaaaa  1052700                                     ----------->GT1                                 ------>ZmHOX2a(2)                                 =============================HOX2a_HOX2a                                <------ZmHOX2a(2)                                ==============================HOX2a_HOX2a     ---------->DOF2            <---------GLK1(1)    --------->LBD16             --------->GLK1(1)                   --------->ETT(1)   <---------HSFB2a(2)         <---------ARR14(2)                <------MYB83   --------->HSFB2a(2)         --------->ARR14(2)                <------MYB46(1) ---------ARR14(2)             <---------AGP1                   <---------MYB46(3) -------->ARR14(2)             --------->ARR14(3)              <---------ANAC58 ------>HSFB2a(1)              <---------ARR14(3)              <---------ANAC58             <-------- -------HSFB2a(1)              --------->ARR11(3)      ------>ZmHOX2a(1)                    <-------- ----->DAG2 --------->AHL20(2) <---------ARR11(3)    <-----------------AGL3            --------->ATHB12   aggttccgaaagaattaaaaaaaactatgtcaagatctctggtgaaacgcgttgctccttatttggctggtcggattagagaaaatcatcgattgcttaa  1052800                                                                                                  ---                                                  --------->TOE1(3)                              <---                         --------->HSFC1(2)      ----------->RAV1(2)                            <----                   ---------->DOF2              ------>MYB83                                  -------       <---------At4g35610                      ------>MYB46(1)   --------->ICU4     ----------->RAV1(1)    <---------At4g35610  <---------HSFC1(2)     -------->P        <---------ATHB12 --------->At4g35610 -ANAC58     <---------At4g35610     <<<<<<<<<TBF1--------->TOE2(3)  <---------REM1(1)        <------ -ANAC58  <---------At4g35610     <<<<<<<<<TBF1<---------ALFIN1  <---------TOE2(3) <---------At4g35610   tttttcttctgcttctgctatcaaagaagcatcttcttcttcttcgtcccaacctgaatcgtcttctaatgatgtagtccatctcagcgacaattgtatc  1052900                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)       <---------ARR14(2)                                          <---------AHL20(2)       --------->ARR14(2)                                       --------->AHL20(2)       --------->ARR11(3)                                       <---------AHL20(2)       <---------ARR11(3)                                      <---------AHL20(2)      <---------GLK1(1)                                        --------->AHL20(2)      --------->GLK1(1)                                        <---------AHL20(1)                 <--    --------->YAB1                                             --------->AHL20(1)                 <--   <---------YAB1                                             --------->AHL20(2)               ------ ------>LBD16              ------>ZmHOX2a(2)             --------->ANAC46                     <------ ------LBD16             <---------ARR11(3)              --------->ANAC55(2)                 -------- -----LBD16              --------->ARR11(3)              --------->ANAC58                   <-------- -->ARR14(2)   <----------DOF2                           --------->ANAC58                  ---------- ---ARR14(2) <----------DOF2  <----------DOF2          <-----------GT1            <------------------   cgggtatgatatctgctcttttgaattgatctctttgcaattcgatacactaggtttttacgaaattaatttatattggatttttgctctaatttgacgg  1053000                                                            --------->At4g35610                                                            <---------At4g35610                                                        --------->ARR14(2)                                                        <---------ARR14(2) --------DOF2                                           --------->GLK1(2) -------DAG2                                         --------->ANAC58 >NtERF2   ----------->GT1                           --------->ANAC58 ---RAP2.6(2)                                      --------->ANAC46 ----------->GT1 ->RAP2.6(3)                                    --------->ZAT18    ----------->GT1 ---GT1   --------->DAG2              <---------ALFIN1 <---------GLK1(2)    --------->AHL20(2) ->HVH21 ---------->DOF2     --------->MYB52(2) --------->ZAT14 <---------ARR14(2)          <-------- ------ANAC81              <---------MYB52(1)   <---------ZAT18 --------->ARR14(2)     <---------DAG2   ctttttgatgaaaaagtaacaaaaattcggtttgtttcgaacacccatagttcacacgattctgcagaaatggaaaaaaaaaatgaaaaccttttcactt  1053100  Previous    Next  AGI:  At5g03900.1    Description:  Identical to Uncharacterized protein At5g03900 precursor [Arabidopsis Thaliana] (GB:Q8GW20;GB:Q8L632;GB:Q8LG15;GB:Q9FFM9;GB:Q9LZB9); similar to unnamed protein product [Vitis vinifera] (GB:CAO15906.1); contains InterPro domain HesB/YadR/YfhF-like (InterPro:IPR000361) Range:  from: 1048294    to: 1052386    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g03905.1    Description:  hesB-like domain-containing protein. Identical to Iron-sulfur assembly protein IscA-like 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q8LCY2;GB:Q9FFM8;GB:Q9LZB9); similar to ATCPISCA (CHLOROPLAST-LOCALIZED ISCA-LIKE PROTEIN), structural molecule [Arabidopsis thaliana] (TAIR:AT1G10500.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96381.1); contains InterPro domain HesB/YadR/YfhF; (InterPro:IPR016092); contains InterPro domain HesB/YadR/YfhF-like (InterPro:IPR000361) Range:  from: 1052579    to: 1054273    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version