Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ATHB12                                                                                       <---------MYB46(3)                                                                                    <---------At4g35610                                                                                <-----------HVH21                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC58 <------MYB46(1)                                                             <---------ANAC58 ----------->GT1                                                             <---------ANAC46 <------MYB83                                                                <---------ANAC58 --------WOX13(1)                                                            <------MYB46(1) -----YAB1            <---------YAB1                                         <------MYB83<---------WOX13(1) -----TOE2(3)<---------MYB46(3)                                          <---------ARR14(2)       --- --WOX13(1) --------->ALFIN1   --------->HSFB2a(2) ------>ZmHOX2a(1)  --------->YAB1<---------ANAC46   gattggtaactacggtgggaaactattaatcttatggaataagtttgtgcatcctggtcaatttggagataaacatatttggtgtgaggtgattgctctt  18439700          --------->At5g28300         ------->GAMYB                                                    --------->LBD16      --------->MYB52(1)                               <---------TOE2(3) <---------LBD16     ----------->HVH21         >>>>>>>>>SARD1    <---------ZAT14      ----------------------->TaNAC69(2)   --------->ANAC58            >>>>>>>>>CBP60g   <---------ZAT18      <---------ARR14(2)           <-   --------->ANAC55(2)    <---------YAB1         --------->ZAT14      --------->ARR14(2)     <-------   <---------ANAC55(2) --------->ICU4         <---------ANAC58   --------->MYB52(1)      <---------ANAC58   --------->ANAC46  --------->YAB1           <---------ANAC46 <---------ANAC58          <---------ANAC58   --------->ANAC58 --------->ICU4            <---------ANAC58 <---------ANAC58    --------->ANAC55(2)   --------->ANAC55(1) <---------YAB1 <---------ARR14(2)<-----------RAV1(1)--------->LBD16   <------- ------->DOF2       <---------YAB1<---------LBD16--------->ZAT18<---------SPL7<-------TEIL   <-------   gaaagacgtaacggtaatggcgatgattatgaaatttggggaaacgttgagtggactaatgttgtgcttacggttcccggttcatacgtcttcgtgcgta  18439800                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                               <---------MYB52(1) <--                                                                             <---------ANAC58 -------                                                                          --------->GLK1(2)   <------          --------->ARR14(2)                                             <---------GLK1(2)  --------- --------ZAT14                                                         <---------TOE1(3)  <---------AHL20(2) --ANAC58 <---------ARR14(2)                  <---------ICU4   <---------YAB1<---------ANAC58<------- --ANAC58------>MYB46(1)            <-----------GT1     <---------DAG2 <---------TOE2(3)  --------->AHL20(2) --ANAC46------>MYB83           <----------DOF2         <----------DOF2<---------YAB1  --------->TOE2(3)   gtttacagaccaaatactgtataagcatgtttttcttttgaccattgctaatgacttactttattgtcattttaagattccgtttcttacattaaaataa  18439900                       --------->ATHB12                       <---------ICU4                       --------->ATHB51                       -------->ATHB1 --->AHL20(2)         --------->AHL20(2)                                                   <--------- --->AHL20(1)         <---------ATHB51                                                <--------P ----AHL20(2)         --------->ICU4                                           --------->ALFIN1 -------AHL20(2)      <---------AHL20(2)                                      <---------SPL7    <---- -->AHL20(2)      --------->AHL20(2)                                         <---------ANAC46  >>>>>> ---AHL20(2)      <---------AHL20(2)   ----------->GT1                       <---------ANAC58 ------- >YAB1       <---------AHL20(2)        ------->GAMYB                         <---------ANAC58<------- --AHL20(1)  --------->AHL20(2)  <---------ARR11(3)              <-----------GT1     <-------GAMYB   tttataggttactatataatttaaattattggcaatatcaaccgaaaaaacacatttagcttcaaaataacaagttttggcgtatggggttgtctttgat  18440000                            <---------YAB1                <---------AHL20(1)                          --------->DAG2                --------->AHL20(1)   ----------->GT1       --------->DAG2           <------------CBF -DOF2------------>CBF ----------->GT1        ------------>CBF               --------->DAG2 -----WOX13(1)  --------->ARR11(3)  ----------->GT1       ---------->DOF2   ---------->DOF2 >>>ARR2        <---------ARR11(3)<---------TOE1(3)   --------->AHL20(2)   <---------AHL20(2)       < -->ATHB12     --------->CCA1(2)  <---------TOE2(3)   <---------AHL20(2) ----------->TBP   --------->DAG2 --YAB1       --------->ARR11(3) --------->MYB52(1)--------->YAB1      <-----------TBP    ---------->DOF2   tgttaagggacaattagatatattttagttaaaattaagggttaaatattcaatattaaaaaaaggggaagacatatataaagtggtattggaaaagccc  18440100                                                  ------>NtERF2                                                  <---------RAP2.3(1)                                                 <---------DEAR3(1)                                                 <---------RAP2.6(2)                                                <---------LBD16                                                <---------At4g35610                                               <-----------RAV1(1)                                              ---------->CDC5                                             ----------->RAV1(2)                                           <------NtERF2                                          --------->ABI4(1)                                          ------>NtERF2                                          <---------ATERF1(1)                                         --------->RAP2.6(2)                                         --------->ATERF1(2)                                         <---------ATERF1(2)                                         --------->RAP2.3(2)                                         --------->RRTF1(3)                                         --------->RRTF1(2)                                         --------->DREB2C(2)                                         --------->RAP2.3(3)                                         --------->DEAR3(1)                                         <---------ALFIN1                                        --------->ORA47(2)                                        --------->ERF1                                        --------->RRTF1(1)                                        --------->RAP2.3(1)                                        --------->ATERF1(1)                                        --------->DEAR4(2)              --------->MYB52(1)       <---------ATERF1(1)           --------->TOE1(3)          --------->DEAR3(1)           --------->TOE2(3)          --------->ANAC46                      --------->DEAR3(1)         <-----------------AGL1      <------------AtMYB77                <---------ALFIN1        ----        <-----------GT1              --------->MYB46(3)                 --------->MYB46(3)       ----      *TSS--------->ZAT6           <---------ARR14(2)                   --------->DEAR3(2)       ----   --------->ICU4                  --------->ARR14(2)            --------->DAG2     --------->DAG2   <---------YAB1                 <---------ARR14(2)<---------ARR14(2)  <---------MYB55(2)       <--- --------->YAB1        <----------DOF2------->GAMYB --------->ARR14(2) --------->SPL7    <------ZmHOX2a(1) ---------ATHB12       <---------DAG2--------->DEAR3(2)        ---------->DOF2     ---------->DOF2   gaatcatgtttaaccctaatggtcactttttgggcagaaaccgccgcctctgcggctacgacttccaaaggcgaaccaccgtcgaaaaagaggaaaacga  18440200             <-----------HVH21            --------->ANAC46  <-----------RAV1(2)             <---------ARR14(2)       ------>ZmHOX2a(1)      --------->HSFB2a(2)             --------->ARR14(2) --->TEIL ------>ZmHOX2a(1)   <---------HSFB2a(2)           --------->LBD16      --------->ANAC46 ----->GLK1(2)<---------MYB52(1)                           <---------ANAC46     --------->TOE1(3) ----->ARR14(2)       <-----------HVH21<---------YAB1      <---------ANAC55(2)  --------->TOE2(3) ------ARR14(2)   <----------DOF2<---------ARR11(3)       <---------LBD16    <-----------GT1   atccatctcctcctccgtcgcttttgtcactcccagatgttctcattctaaactgtttatcccgtataccgaaatcgtattaccctaaactctccatagt  18440300                        <---------ARR14(2)                        --------->ARR14(2)                       <---------CCA1(2)                     --------->YAB1             >>>>>>>>>>GATA-1                ------>ZmHOX2a(2)         --------->ANAC58              <---------ARR11(3)          --------->ANAC58                            <---------At4g35610          <---------ANAC58             --------->MYB46(3)                             --------->At4g35610          <---------ANAC55(2)        <-----------GT1                           <---------AtLEC2    --          <---------ANAC46        ------>ZmHOX2a(2)                          <-----------GT1      <--          <---------ANAC58      <---------ARR11(3)       --------->ANAC46<---------DAG2           ---          --------->ANAC55(2)   --------->ARR11(3)  <-----------GT1      <----------DOF2  ---------->DOF2   ctccaaaacatttcgtgatctcatcatatccattgatcttaaccacgctcgatttcaccacaaaacacaagaacacttttttcatgtctgcttaaagctt  18440400                --------->O2        =================================HOX2a_HOX2a        ------>ZmHOX2a(1)   ------>ZmHOX2a(2)  <------ZmHOX2a(2)                                             ------------------------>ANAC81  =============HOX2a_HOX2a                                     <------ZmHOX2a(1) <---------ARR14(2)                            <---------ARR14(2)          >>>>>>>>>TBF1 --------->ARR14(2)               <------ZmHOX2a(2)  ----------->HVH21  >>>>>>>>>TBF1 ------->LBD16  <---------O2      ====================================HOX2a_HOX2a>>>>>>>>>TBF1      < -------HSFB2a(2)     --------->ZAT14          --------->ARR14(2) <------ZmHOX2a(1)                 - ------>HSFB2a(2)     <---------ZAT18        <---------ATHB12--------->ALFIN1 >>>>>>>>>TBF1 ---------   cccgatcgtcctcttccctcgtggtacacactctggatcaaaccccaaggattcgatgacaaggaggaggagaagaagaagaagaagaagtctaccttgg  18440500                                                 --------->ICU4                                            <------MYB46(1)                                           --------->MYB59    ------->TEIL                           <---------TOE1(2) --------->ANAC46                          --------->MYB111(1) --------->ANAC58                  <---------ANAC46 --------->ANAC58                  <---------ANAC58                                                -- ---------------AtSPL3    --------->MYB46(3)<------MYB83--------->At4g35610                        <- -------------->AtSPL8--------->HSFB2a(2) <--------P    <---------At4g35610                    <----- >TOE2(3)     ------>ZmHOX2a(1)    <---------ANAC58   <-----------RAV1(2)            ------>ZmHOX2a(1)   tacaagtaccttcttcctatgcttctcaaacaccattgctcgtagtaggtattgattcagatgtctatgcattcaaacaatgttatcctccctctcgggt  18440600  Previous    Next  AGI:  At4g39753.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/kelch-repeat protein At4g39753 [Arabidopsis Thaliana] (GB:Q1PE09;GB:Q8LEQ6;GB:Q9LDK6); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G39756.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR0 Range:  from: 18440106    to: 18441439    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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