AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
--------->O2 <---------TGA1a <---------O2 ----------->RAV1(1) --------->ALFIN1 ---------->DOF2 --------->TGA1a <-----------RAV1(1) <------NtERF2 ----------->GT1 ==============================bZIP_DOF <-----------RAV1(1)
tctaatcgaatcgatttgggcaccgtagcatcgatgagtgaatcgatatggtcaaagccacagaatttagccatgtgggtttgttcgtctggtgttgcag	15930900
<-------GAMYB --------->ALFIN1 --------->ALFIN1 --------->TGA1a <---------TGA1a =================== ---------->DOF2 ----------- ------>NtERF2 =================== ------>NtERF2 <---------O2 <-----------RAV1(1) ==============MYC_MYB ---------->DOF2 ----------->HVH21 ----------->RAV1(2) <------NtERF2 <--- ----------->HVH21 ------->GAMYB <-----------RAV1(1) ------>NtERF2 ----- ----------->TGA1 <-----------GT1 <-----------HVH21 ==================bZIP_DOF
agttgtgacgacgagggaaagtatcgctgggtttaacagcatcgacggagatggaacgcgtctgctggtgcctcccgaaagccgccgtgtggttgacaga	15931000
--------->ALFIN1 --------->ALFIN1 =======================bZIP_DOF >HVH21 --------->ALFIN1 =======================bZIP_DOF <------ZmHOX2a(1) <----------DOF2 ---ZmHOX2a(2) ---------->DOF2 --------->ALFIN1 --------->ALFIN1 <------NtERF2 ---->AGP1 ---------->DOF2 <------NtERF2 <-----------HVH21 --------->ALFIN1
tcgaggggtggagatgaaaggggaaagggaagagacatacctcgccggagcgtgaggaacaaggtgaggtgtttcagcgttacggtgtcgttttgtgtcg	15931100
------>ZmHOX2a(1) <-----------GT1 ----------->GT1 ----------->HVH21 <----------ID1
ttaacgagacgtttgacgattcctctgtaagcaagtctccttgcgcgctccattgggaaaaaaggttgcagtcagaaaacgaagagagtaagagagatgt	15931200
<----------DOF2 ---------->DOF2 ------->TEIL ---------->ID1 <------ZmHOX2a(1) <--------- ---------->DOF2 <-----------GT1 --------->ALFIN1 ----------->GT1
tttgagaaagatggatgtcttttttagtttttcgccatgaatgaaaggaggaggtagaagctagctacaaggagggaatctgagagagagtatatacaat	15931300
--------->O2 --------->TGA1a <---------TGA1a <---------O2 ===================================MYC_MYB <-------GAMYB *TSS --GT1 ----------->HVH21 <-----------GT1 ----------->TBP ---
atacactcacggaccgttgaatataaaatgtgtatattcacgtcccaagaaatagttagtttataaatacagagaaatttttgggaaataaataaaaatc	15931400
---------->DOF2 ==========================bZIP_DOF ----------->GT1 <---------TGA1a <--------P --------->TGA1a =================================MYC_MYB <-------GAMYB --------->O2 --------->ALFIN1 ==================================MYC_MYB --->ZmHOX2a(1) --------->ALFIN1 <---------O2 <--------HAHB4
ctcaaatttcgtggtgtaggctcggatgtggttggtgaaaagttgcagattccacgtgtatcgcatctaaatcagtagtgcaatattgtgctaatcattt	15931500
------>NtERF2 ----------->HVH21 <-----------GT1 ------>ZmHOX2a(2) <-----------GT1 <---------AGP1 <-----------GT1 <---------
tatttttatgattaaattggatctccgacatctcttaattatttgtttattagtagcagtttctccaaactatttacattttttcacaacaatatacaat	15931600
<---------------AtSPL8 <------ZmHOX2a(1) --GT1 --------------->AtSPL8 ---------->DOF2 <----------DOF2 ------>ZmHOX2a(1) -----
attttttattgagtactaactattgtgattttaaaagtaggattatttagtgtctttagttcgcaaatttcttattttcctacaaaaactgtagttcccc	15931700
----------->GT1 ----------->GT1 <---------------AtSPL8 <-------TEIL ----------->GT1 <---------------AtSPL3 <----------ID1 ---------->DOF2 ----------->RAV1(1) ---------->AGL15 ----------->GT1 <-----------GT1 ---------->DOF2 --
tctaatgggacatacgtaaattgtaaagtttaatcaatgttaagtttttttggttctgatttacatatccaacaaaaaagtacgaaaaaatagaatttat	15931800

AGI:	At4g33010.1
Description:	ATGLDP1 (ARABIDOPSIS THALIANA GLYCINE DECARBOXYLASE P-PROTEIN 1); glycine dehydrogenase (decarboxylating). Identical to Putative glycine dehydrogenase [decarboxylating] 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q94B78;GB:O82642;GB:Q8GTY1;GB:Q8VZF0); similar to ATGLDP2 (ARABIDOPSIS THALIANA GLYCINE DECARBOXYLASE P-PROTEIN 2), glycine dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT2G26080.1); similar to Glycine dehydrogenase [decarboxylating], mitochondrial precursor (Glycine decarboxylase) (Glycine cleavage system P-protein) (GB:P26969); similar to Glycine dehydrogenase [decarboxylating], mitochondrial precursor (G
Range:	from: 15926673	to: 15931335	Orientation: Reverse
Links:	TAIR MIPS

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