Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-------
GAMYB
--------->
MYB55(2)
--------->
MYB52(2)
<---------
MYB46(3)
--------->
MYB111(2)
<---------
MYB55(1)
------
<---------
MYB52(1)
--------->
ICU4
<-------
GAMYB
--------->
YAB1
--------->
ZAT18
--------->
YAB1
--------->
LBD16
--------->
At4g35610
<---------
ZAT14
<---------
DAG2
<---------
LBD16
--------->
ZAT2
--------->
ARR11(3)
--------
--------->
TOE2(3)
<---------
At4g35610
<---------
At4g35610
<---------
ZAT18
<----------
DOF2
--------->
At4g35610
--------->
At4g35610
<---------
ARR11(3)
--------
--------
At4g35610
<---------
YAB1
<--------
P
<---------
ZAT2
<---------
ATHB12
--------->
ZAT14
------->
At4g35610
--------->
ICU4
--------->
LBD16
<---------
At4g35610
<---------
RVE1(1)
--------
cagctttagccttatcagaaggtactgatgagagcttcccggttgttggagatag
ctgagcttacaaatgataagagattttagagcactgattcacgaa
13359200
--------->
MYB52(1)
---->
DOF2
--------->
ICU4
<-----------
GT1
<------
ZmHOX2a(1)
->
ANAC58
--------->
YAB1
--------->
DAG2
<----------
->
ANAC58
<---------
ICU4
---------->
DOF2
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
->
ANAC46
--------->
ICU4
---------->
DOF2
---------->
DOF2
<------
ZmHOX2a(1)
<---------
AtLEC2
-
agagagagaccataatgaaatgttgaaaagaaaaagttac
caaagggtttgagaggaaaacaggagactctaacagagttgcaggactaagaccaggaga
13359300
------>
ZmHOX2a(2)
====================================
HOX2a_HOX2a
=====================================
HOX2a_HOX2a
--------->
GLK1(1)
<------
ZmHOX2a(2)
=====================
HOX2a_HOX2a
--------->
ARR14(2)
<---------
ARR11(3)
<-----------
GT1
<---------
AGP1
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ARR14(2)
--------->
ARR14(3)
--------->
KAN4(2)
<---------
ARR14(3)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ANAC46
<---------
GLK1(1)
<---------
LBD16
<---------
GLK1(1)
<---------
ARR11(3)
------>
ZmHOX2a(1)
---------->
DOF2
--------->
GLK1(1)
---------->
DOF2
<---------
KAN4(1)
<---------
ZAT18
====================
HOX2a_HOX2a
<-------
GAMYB
--------->
GLK1(1)
<-------
TEIL
<---------
ARR14(1)
--------->
ARR11(3)
<---------
MYB46(3)
--------->
KAN4(1)
--------->
ANAC46
<---------
CCA1(2)
<---------
ARR11(3)
----------->
GT1
<---------
KAN4(2)
--------->
MYB46(3)
--------->
LBD16
------>
ZmHOX2a(1)
<---
-
RAV1(2)
--------->
ARR11(3)
--------->
TOE2(3)
--------->
At5g28300
<----------
DOF2
------>
ZmHOX2a(1)
-------->
CCA1(2)
---------->
TaMYB80
<---------
DEAR3(1)
<---------
GLK1(1)
--------->
ANAC46
agagatggttaaagatttcgactgaagaatatcctcagtgtttaaccacggtgcattaaacccggatctcgcagcaatcctttcacgaagagctcctcgt
13359400
<---------
YAB1
<---------
ANAC58
<---------
ANAC58
<---------
MYB46(3)
------
--------->
DAG2
------>
ZmHOX2a(1)
------>
ZmHOX2a(2)
---------->
DOF2
<---------
ARR14(2)
==============
HOX2a_HOX2a
<---------
ANAC58
--------->
GLK1(2)
---------->
DOF2
<----------
DOF2
<-------
<---------
ANAC58
--------->
ARR14(2)
--------->
AHL20(2)
<---------
At4g35610
<-------
GAMYB
<----------
DOF2
<---------
ANAC46
<---------
YAB1
<---------
AHL20(2)
--------->
ARR14(2)
<---------
MYB46(3)
------
ZAT18
--------->
ALFIN1
--------->
TOE2(3)
<---------
AHL20(2)
<---------
ARR14(2)
------>
ZmHOX2a(1)
gaactttcttgaaaggtggtttgcaaagaatcctcattcttgatgtaatttaaagaaaactctctaccaagttccgctttcgatctcttcctgtggttag
13359500
------>
MYB83
<-----------
GT1
--------->
YAB1
<---------
YAB1
<---------
DAG2
------>
MYB46(1)
-
<----------
DOF2
--------->
ANAC58
----
<---------
At4g35610
--------->
ANAC58
<---------
At4g35610
<---------
ZAT14
--------->
At4g35610
--------->
ANAC46
<----------
DOF2
--------->
At4g35610
--->
MYB52(2)
--------->
MYB46(3)
--------->
At4g35610
<---------
At4g35610
<---
-
P
--------->
ZAT14
---------->
DOF2
<---------
YAB1
*
TSS
--------->
At4g35610
----
tagtactacagtcgaaccattctcccattacagcagctttattatcaataccagccat
t
gcaaacccaagtttcagctttaacttgggctcaagctgaaa
13359600
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
----------->
GT1
--------->
YAB1
<---------
YAB1
<---------
ICU4
--------->
ATHB12
--------->
ATHB51
<---------
ANAC46
-------->
ATHB1
<---------
ANAC55(2)
--------->
AHL20(1)
<------
MYB83
<---------
YAB1
<------
MYB46(1)
--------->
ICU4
--------->
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC55(1)
<---------
ATHB51
--------->
MYB59
--------->
AHL20(2)
--------->
MYB111(1)
----------->
GT1
<---------
AHL20(2)
--------->
ZAT14
-------->
ATHB12
--------->
ZAT14
--------->
TOE1(3)
--------->
AHL20(2)
------->
GT1
<---------
ANAC55(2)
--------->
TOE2(3)
--------->
YAB1
<---------
ZAT14
------
ANAC55(2)
<---------
ZAT14
<---------
ARR11(3)
<---------------
AGL15
----->
ANAC55(2)
----------->
HVH21
--------->
ARR11(3)
<-----------------
AGL3
cgtgattaggtgttacatatatgacacagagcagttaacatggaactaaaatcttaaaaaattattgtaattaaaatggaaacagagcagttttttttat
13359700
--------->
YAB1
<--
--------->
TOE1(3)
---
<---------
WOX13(1)
<---------
WOX13(1)
-----
<---------
YAB1
--------->
CCA1(2)
<---------
MYB59
--------->
ANAC58
----------->
GT1
--------->
YAB1
----------->
GT1
--------->
ANAC46
<-------
TEIL
<-----------
GT1
----------->
GT1
<---------
ANAC55(2)
--------->
ANAC58
<----------
DOF2
--------->
ATHB12
<---------
ATHB12
<-----------
GT1
<-------
TEIL
-
<---------
ATHB12
--------->
CCA1(2)
--------->
TOE2(3)
---------->
DOF2
--------->
ANAC55(2)
--------->
AtLEC2
atgcaataagtcttttgatggagatacaagagtgattaataccttataacaatgaagataaaagagtgcttaatacctgatttactaatatacatgcaat
13359800
<-----------
HVH21
--------->
MYB46(3)
--------->
ANAC58
--------->
ANAC58
-------
ANAC55(2)
----------------------->
TaNAC69(2)
------>
ANAC55(2)
<---------
HSFC1(2)
---->
ICU4
<----------
DOF2
--------->
REM1(2)
--------->
HSFC1(2)
---------->
HVH21
<---------
MYB52(1)
<------
ZmHOX2a(2)
------->
TEIL
<-----
aagtgacacccatcagactttttatttcgccgtttagacagtaagagagatcgaaacatcgaaacatggacttgtctatgtctctctgtttttatgggtt
13359900
--------->
ARR11(3)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(1)
--------->
ANAC46
<---------
AHL20(1)
--------->
WRKY12
<---------
YAB1
<---------
GLK1(1)
--------->
DOF5.7(2)
--------->
ANAC46
<---------
AHL20(2)
<---------
TOE2(3)
---
P
--------->
ICU4
<---------
ARR11(3)
<---------
YAB1
-
gatcacacaaaatgatcaatataataaatcttctgtagtagaaatctcttgctcttgctctctctctctctcgttcttgattatcgtttaccctcaacac
13360000
<---------
AHL20(2)
----------->
GT1
--------->
MYB59
--------->
RAP2.6(3)
<------
MYB83
--------->
ARR14(2)
<---------
MYB46(3)
--------->
ZAT6
<---------
ARR14(2)
<------
MYB46(1)
------>
ZmHOX2a(1)
------->
TEIL
<---------
ZAT2
--------->
TOE1(3)
--------->
DAG2
----------->
GT1
--------->
ZAT2
--------->
TOE2(3)
---------->
DOF2
-------->
YAB1
--------->
At4g35610
<-----------
GT1
--------->
AHL20(2)
--------->
MYB46(3)
aatgaaaatgtatatcggcagaaaaactacaagagatttacacagcttggttagataaaatttctccttaactctctaacaaacaaaaaagtttcaattt
13360100
Previous
Next
AGI:
At4g26440.1
Description:
WRKY34 (MICROSPORE-SPECIFIC PROMOTER 3); transcription factor. Identical to Probable WRKY transcription factor 34 (WRKY34) [Arabidopsis Thaliana] (GB:O65590); similar to WRKY2 (WRKY DNA-binding protein 2), transcription factor [Arabidopsis thaliana] (TAIR:AT5G56270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66849.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657)
Range:
from: 13357604
to: 13359559
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version