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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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1        10        20        30        40        50        60        70        80        90        100 
                                        <-------GAMYB
                                       --------->MYB55(2)
                                       --------->MYB52(2)
                                       <---------MYB46(3)
                                       --------->MYB111(2)
                                      <---------MYB55(1)                                      ------
                                     <---------MYB52(1)                              --------->ICU4
                                     <-------GAMYB               --------->YAB1  --------->ZAT18
           --------->YAB1           --------->LBD16    --------->At4g35610       <---------ZAT14
      <---------DAG2              <---------LBD16      --------->ZAT2    --------->ARR11(3) --------
      --------->TOE2(3)      <---------At4g35610       <---------At4g35610       <---------ZAT18
<----------DOF2              --------->At4g35610  --------->At4g35610    <---------ARR11(3) --------
--------At4g35610       <---------YAB1<--------P  <---------ZAT2<---------ATHB12 --------->ZAT14
------->At4g35610    --------->ICU4--------->LBD16<---------At4g35610   <---------RVE1(1)   --------
 
cagctttagccttatcagaaggtactgatgagagcttcccggttgttggagatagctgagcttacaaatgataagagattttagagcactgattcacgaa  13359200
                                      --------->MYB52(1)
---->DOF2       --------->ICU4   <-----------GT1                                            <------ZmHOX2a(1)
->ANAC58 --------->YAB1      --------->DAG2                                              <----------
->ANAC58 <---------ICU4     ---------->DOF2        <------ZmHOX2a(1)            <------ZmHOX2a(1)
->ANAC46--------->ICU4---------->DOF2---------->DOF2       <------ZmHOX2a(1) <---------AtLEC2      -
 
agagagagaccataatgaaatgttgaaaagaaaaagttaccaaagggtttgagaggaaaacaggagactctaacagagttgcaggactaagaccaggaga  13359300
                                                               ------>ZmHOX2a(2)
                                                               ====================================HOX2a_HOX2a
                                                              =====================================HOX2a_HOX2a
                                                              --------->GLK1(1)
                                                              <------ZmHOX2a(2)
                                                              =====================HOX2a_HOX2a
                                                             --------->ARR14(2)
                                                             <---------ARR11(3)
                                       <-----------GT1       <---------AGP1
                          --------->ARR11(3)                 <---------ARR14(2)
                          <---------ARR14(2)                 --------->ARR14(3)
                          --------->KAN4(2)                  <---------ARR14(3)
                          --------->ARR14(2)                 --------->ARR11(3)
                          <---------ARR11(3)              --------->ANAC46
                         <---------GLK1(1)               <---------LBD16               <---------GLK1(1)
          <---------ARR11(3)  ------>ZmHOX2a(1)      ---------->DOF2                   --------->GLK1(1)
      ---------->DOF2    <---------KAN4(1)      <---------ZAT18====================HOX2a_HOX2a
   <-------GAMYB         --------->GLK1(1)      <-------TEIL<---------ARR14(1)        --------->ARR11(3)
  <---------MYB46(3)     --------->KAN4(1)  --------->ANAC46<---------CCA1(2)         <---------ARR11(3)
  ----------->GT1       <---------KAN4(2)--------->MYB46(3)--------->LBD16  ------>ZmHOX2a(1)   <---
-RAV1(2)  --------->ARR11(3) --------->TOE2(3)--------->At5g28300           <----------DOF2 ------>ZmHOX2a(1)
-------->CCA1(2)        ---------->TaMYB80  <---------DEAR3(1)<---------GLK1(1)  --------->ANAC46
 
agagatggttaaagatttcgactgaagaatatcctcagtgtttaaccacggtgcattaaacccggatctcgcagcaatcctttcacgaagagctcctcgt  13359400
                             <---------YAB1
               <---------ANAC58
               <---------ANAC58
             <---------MYB46(3)                                                               ------
         --------->DAG2      ------>ZmHOX2a(1)                                  ------>ZmHOX2a(2)
       ---------->DOF2   <---------ARR14(2)                                     ==============HOX2a_HOX2a
   <---------ANAC58      --------->GLK1(2)     ---------->DOF2           <----------DOF2    <-------
   <---------ANAC58      --------->ARR14(2)   --------->AHL20(2)       <---------At4g35610 <-------GAMYB
<----------DOF2<---------ANAC46 <---------YAB1<---------AHL20(2)   --------->ARR14(2)     <---------MYB46(3)
------ZAT18 --------->ALFIN1--------->TOE2(3)<---------AHL20(2)    <---------ARR14(2)  ------>ZmHOX2a(1)
 
gaactttcttgaaaggtggtttgcaaagaatcctcattcttgatgtaatttaaagaaaactctctaccaagttccgctttcgatctcttcctgtggttag  13359500
                                                 ------>MYB83
                                       <-----------GT1
                                      --------->YAB1
                                     <---------YAB1
                                 <---------DAG2  ------>MYB46(1)                                   -
                                 <----------DOF2--------->ANAC58                                ----
                            <---------At4g35610 --------->ANAC58                         <---------At4g35610
   <---------ZAT14          --------->At4g35610 --------->ANAC46         <----------DOF2 --------->At4g35610
--->MYB52(2)--------->MYB46(3) --------->At4g35610                     <---------At4g35610      <---
-P --------->ZAT14       ---------->DOF2<---------YAB1    *TSS         --------->At4g35610      ----
 
tagtactacagtcgaaccattctcccattacagcagctttattatcaataccagccattgcaaacccaagtttcagctttaacttgggctcaagctgaaa  13359600
                                                                    <---------AHL20(2)
                                                                    --------->AHL20(2)
                                                                   <---------AHL20(2)
                                                               <---------YAB1
                                                             ----------->GT1
                                                             --------->YAB1
                                                            <---------YAB1
                                                          <---------ICU4
                                                          --------->ATHB12
                                                          --------->ATHB51
    <---------ANAC46                                      -------->ATHB1
    <---------ANAC55(2)                                  --------->AHL20(1)
    <------MYB83                                         <---------YAB1
    <------MYB46(1)                                      --------->ICU4
    --------->ANAC55(2)                                  <---------AHL20(2)
    <---------ANAC55(1)                                  <---------ATHB51
   --------->MYB59                                    --------->AHL20(2)
   --------->MYB111(1)      ----------->GT1           <---------AHL20(2)          --------->ZAT14
-------->ATHB12           --------->ZAT14       --------->TOE1(3)  --------->AHL20(2)
------->GT1<---------ANAC55(2)                  --------->TOE2(3)  --------->YAB1 <---------ZAT14
------ANAC55(2)           <---------ZAT14     <---------ARR11(3)  <---------------AGL15
----->ANAC55(2)  ----------->HVH21            --------->ARR11(3) <-----------------AGL3
 
cgtgattaggtgttacatatatgacacagagcagttaacatggaactaaaatcttaaaaaattattgtaattaaaatggaaacagagcagttttttttat  13359700
                                           --------->YAB1                                        <--
                                      --------->TOE1(3)                                          ---
                               <---------WOX13(1)                           <---------WOX13(1) -----
                               <---------YAB1         --------->CCA1(2) <---------MYB59   --------->ANAC58
                             ----------->GT1     --------->YAB1----------->GT1            --------->ANAC46
                     <-------TEIL  <-----------GT1 ----------->GT1     <---------ANAC55(2)--------->ANAC58
        <----------DOF2      --------->ATHB12   <---------ATHB12     <-----------GT1   <-------TEIL-
  <---------ATHB12  --------->CCA1(2) --------->TOE2(3) ---------->DOF2--------->ANAC55(2)--------->AtLEC2
 
atgcaataagtcttttgatggagatacaagagtgattaataccttataacaatgaagataaaagagtgcttaatacctgatttactaatatacatgcaat  13359800
       <-----------HVH21
     --------->MYB46(3)
    --------->ANAC58
    --------->ANAC58
-------ANAC55(2)                                             ----------------------->TaNAC69(2)
------>ANAC55(2)                                   <---------HSFC1(2)
---->ICU4     <----------DOF2--------->REM1(2)     --------->HSFC1(2)
---------->HVH21            <---------MYB52(1)<------ZmHOX2a(2)  ------->TEIL                 <-----
 
aagtgacacccatcagactttttatttcgccgtttagacagtaagagagatcgaaacatcgaaacatggacttgtctatgtctctctgtttttatgggtt  13359900
                       --------->ARR11(3)
                  --------->YAB1
                 <---------AHL20(2)
                 <---------YAB1
                --------->AHL20(2)
                --------->AHL20(1)                                                      --------->ANAC46
                <---------AHL20(1)                                                 --------->WRKY12
           <---------YAB1             <---------GLK1(1)                           --------->DOF5.7(2)
   --------->ANAC46  <---------AHL20(2)                                        <---------TOE2(3)
---P    --------->ICU4 <---------ARR11(3)                                   <---------YAB1         -
 
gatcacacaaaatgatcaatataataaatcttctgtagtagaaatctcttgctcttgctctctctctctctcgttcttgattatcgtttaccctcaacac  13360000
                                                     <---------AHL20(2)
                                                ----------->GT1
                                                --------->MYB59
          --------->RAP2.6(3)               <------MYB83
         --------->ARR14(2)                 <---------MYB46(3)     --------->ZAT6
         <---------ARR14(2)                 <------MYB46(1)    ------>ZmHOX2a(1)
       ------->TEIL                     <---------ZAT2        --------->TOE1(3)     --------->DAG2
    ----------->GT1                     --------->ZAT2        --------->TOE2(3)    ---------->DOF2
-------->YAB1--------->At4g35610  <-----------GT1   --------->AHL20(2)     --------->MYB46(3)
 
aatgaaaatgtatatcggcagaaaaactacaagagatttacacagcttggttagataaaatttctccttaactctctaacaaacaaaaaagtttcaattt  13360100
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AGI:  At4g26440.1   
Description:  WRKY34 (MICROSPORE-SPECIFIC PROMOTER 3); transcription factor. Identical to Probable WRKY transcription factor 34 (WRKY34) [Arabidopsis Thaliana] (GB:O65590); similar to WRKY2 (WRKY DNA-binding protein 2), transcription factor [Arabidopsis thaliana] (TAIR:AT5G56270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66849.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657)
Range:  from: 13357604    to: 13359559    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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