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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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        <---------ICU4
        --------->YAB1                                                          <---------ZAT14
      <---------AHL20(2)                                                        --------->ZAT14
---------ZAT14                <---------HSFB2a(2)                        --------->AtMYB61
-------ZAT18  --------->TOE1(3)       <---------ARR11(3)             <-------TEIL
------>ZAT14  --------->TOE2(3)       --------->ARR11(3)           --------->ARR14(2)
---------->AtSPL8             --------->HSFB2a(2)                  <---------GLK1(2)<----------DOF2
-----------AtSPL8         <----------DOF2       <-----------GT1    <---------ARR14(2)
 
tgtacacatattaatgaccttaaaccattctttatagaagagaccttgattttacttactcttgctccaagattcaccaaaactacactttctcaatact  13332500
                                  >>>>>>>>>ARR1
                                  >>>>>>>>>ARR2
                           ------>NtERF2
                          --------->LBD16
                    --------->HSFC1(2)
                    <---------HSFB2a(1)
                    --------->HSFB2a(1)
                  <---------ARR11(3)                                      --------->bZIP60(2)
                  --------->ARR11(3)         <------MYB83                 --------->ANAC58
              ---------->DOF2     <---------GLK1(2)             <---------WOX13(1)
          <---------ICU4 --------->HSFB2a(2) <------MYB46(1)  --------->ATHB12        --------->TOE1(2)
         --------------->AGL15  <---------YAB1 --------->WRKY18(1)        --------->ANAC46
         <---------------AGL15  <---------TOE2(3)--------->WOX13(1)       --------->ANAC58
         ===========================================================================================
      <-----------GT1<----------DOF2        --------->MYB59<---------At4g35610      ------->TEIL
  --------->AHL20(2)<---------HSFC1(2)    <---------MYB52(1) <---------YAB1----------->RAV1(1)
 
agtcattttatactcattaaagaactttcccgactaagattgtctgtttggtcaatctatttagatgattggattccacgacatatgtaccagcgagtga  13332600
                                                                                            <-------
                                                                                            <-------
                                                                                            <-------
                                                                                          ------>NtERF2
                                       <---------YAB1                                  --------->At4g35610
                  <---------MYB46(3)<---------ARR14(2)                             --------->ANAC58
            ----------->RAV1(2)     --------->ARR14(2)                             --------->ANAC58
 --------------->AGL15              <---------MYB52(1)        --------->YAB1    <---------At4g35610
 <---------------AGL15          <---------LBD16               <---------ICU4    --------->At4g35610
 <----------DOF2 <---------AtMYB61--------->LBD16     --------->ZAT18           --------->ZAT2   ---
<-----------------AGL3     <---------AHL20(2)         <---------ZAT18           <---------ZAT2   <--
=================MADS_MADS <-----------GT1  <---------TOE2(3)<---------ATHB12<--------P<---------At4g35610
 
tgctctttttttggtacctggtggttctatttacttccggttatgttaagaattttgtgaactaatcatgttttttttgggttagctcgcctctgccgtg  13332700
                                                                                    <---------TOE1(3)
     ----------->HVH21                                                              --------->MYB59
--ANAC58                                                                            <---------TOE2(3)
--ANAC58                                                                      --------->AHL20(2)   -
--ANAC46                                                                      <---------AHL20(2) <--
------>HSFB2a(2)                                                          <---------TOE2(3)      ---
-------HSFB2a(2)     <---------ZAT6                                <-------TEIL<---------AHL20(2)<--
 
ctcgaagtctgactggtttggctagagttactgaaacagagtttatttgctattgtttaaaatgtttaggctcatctaagattaatttaggttgaactaa  13332800
                                  <---------YAB1                                         ------>ZmHOX2a(2)
                                  --------->ICU4                                        <------ZmHOX2a(2)
                                <---------ICU4                                         --------->ARR14(2)
                                -------->HAHB4                                         <---------ARR14(2)
                                --------->YAB1                                         <---------ARR11(3)
              <---------TOE2(3)<---------ATHB51                                        --------->ARR11(3)
   ------>ZmHOX2a(1)           --------->ICU4                                          --------->ARR14(3)
   --------->LBD16           --------->YAB1                                            <---------ARR14(3)
  <---------LBD16           <---------AHL20(2)                  ----------->GT1        --------->AGP1
 ----------->RAV1(2)        --------->AHL20(2)         <--------P                     <---------GLK1(1)
-------->ARR11(3)          <---------AHL20(2)        <------MYB83                     --------->GLK1(1)
-------ARR11(3)            <---------AHL20(1)        <------MYB46(1)             <------NtERF2 <----
------>ARR11(3)            --------->AHL20(1)       <---------AtMYB61           <xxxxxxxxxxxxxxxxsmallRNA(le3)
-------AHL20(1)            --------->AHL20(2)       --------->MYB111(1)         <xxxxxxxxxxxxxxxxxxx
 
tatatcctggagagtttatggatgaactaatttaataatgagtatcaaatatgagttggtagataaacagtagaaaactaaggcctcagagatcttggtg  13332900
                                                          --------->bZIP60(1)
                                                          <---------bZIP60(1)
                                                          --------->TGA2(1)
                                                         <xxxxxxxxxxxxxxxxsmallRNA(fl3)
                                                        <xxxxxxxxxxxxxxxxsmallRNA(fl3)
                                                     <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
           --------->At4g35610                      <---------YAB1
      --------->YAB1                                <---------AHL20(2)
      <---------ICU4                               <---------AHL20(2)
     <---------ATHB12                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <--
    ------>MYB46(1)*TSS   <---------ARR11(3)    <---------AHL20(1)                               ---
    ------>MYB83  <----------ID1                <---------ARR11(3)                         ---------
   --------->WOX13(1) ---------->DOF2           --------->ARR11(3)                      --------->DAG2
-----MYB46(3)------->GAMYB--------->ARR11(3)    --------->AHL20(1)   <------NtERF2     ---------->DOF2
xsmallRNA(se3) ---------->DOF2           ----------->GT1<-----------GT1        ------------>CBF <---
 
gtaaaccaatcatcaactgaaagaacaaagttcttcatcaagagtagcaaatatttttattacatcactggcctcattcaaaaacaattcaaaagtggaa  13333000
                                                                                  --------->ARR14(2)
                                                                       --------->GLK1(1)--------->SPL7
        --------->GLK1(1)                                        --------->LBD16 <---------GLK1(1)
-------------AGL15              --------->YAB1                  --------->LBD16  --------->GLK1(1)--
------------>AGL15      ----------->GT1 --------->At4g35610    <---------HSFB2a(2)--------->GLK1(2)
>ALFIN1 <---------GLK1(1)--------->At5g28300                   --------->HSFB2a(2)<---------ARR14(2)
--------------AGL3   --------->YAB1     <---------At4g35610<----------DOF2 ---------->DOF2       <--
 
cttattttgggaaatctatatcgatgatggtaaaatcagaagtagctggtttgtgatcacatctttcccgagggaattcaaagggaatccgaacgatttt  13333100
                                                                                                   -
                           <---------YAB1                                                         <-
          <---------At5g28300---------->DOF2                                                      --
         <-----------GT1<---------AHL20(2)                                                      ----
      <----------DOF2   --------->AHL20(2)                                                     <----
<-----------TGA1    <---------AHL20(2)          <---------ARR11(3)                             -----
-------->ID1        --------->AHL20(2)          --------->ARR11(3)                     --------->DAG2
---------GT1       --------->AHL20(2)       ---------->DOF2                          ---------->DOF2
 
tttcgtcatcttttaccatcaaaaaaatttatcaaagaaaatgtcataaaagacctcaaaaaacgttttctaaatcggcgaaaaacaaaaaaggtgttat  13333200
       <---------YAB1
    <---------YAB1                                                            ---------->ID1
    --------->ICU4                                                           <-----------GT1
  --------->YAB1                                        ---------->DOF2      <xxxxxxxxxxxxxxxxsmallRNA(fl3)
 --------->ICU4                                     --------->GLK1(1)     <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)
 <---------YAB1                               --------->LBD16  --------->ARR14(2)
-------->YAB1                                <---------HSFB2a(2)       --------->ATHB12
--------YAB1                   --------->YAB1--------->LBD16  --------->GLK1(1)
------->ICU4                  <---------AHL20(2)  <------ZmHOX2a(1)   <---------ATHB12
----->YAB1                --------->AHL20(2)<---------LBD16   <---------GLK1(1)
-----YAB1           --------->At4g35610     <---------HSFB2a(2)<---------ARR14(2)      ------>ZmHOX2a(1)
---->ICU4           <---------At4g35610     --------->HSFB2a(2)--------->GLK1(2)<-----------TGA1  <-
 
gatgatgatgatgagtcagaagtagctgattatataatcacatgtttcccggaggaattcaaagggaatccgaatgattttttcgtcatcctcaccatca  13333300
                                        --------->AHL20(2)  --------->TOE1(2)
               ---------->DOF2      --------->AHL20(2)      --------->TOE2(2)
             --------->ANAC46    ------->GAMYB--------->ANAC46
--------ARR11(3)                --------->MYB46(3)        --------->ARR14(2)               <--------
 
atatcaatactgctccacaaaagttccaatattcaaccaaaaaataaacacaaaacattcaaatctacgactaagaagaaaactacagataaggctttgc  13333400
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AGI:  At4g26365.1   
Description:  snoRNA. snoRNA
Range:  from: 13332843    to: 13332920    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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