Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                --------->ARR11(3)                <---------ARR11(3)                --------->AHL20(1)                    <----------DOF2               <---------AHL20(2)                 ---------->ID1           --------->AHL20(2)  <---------TOE1(3)  <-----------GT1           <---------AHL20(2) <-----------RAV1(2)<-----------GT1    --------->At5g28300   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ----------->GT1      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->ANAC46      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      --------->ARR11(3) <---------At5g28300    ---------->DOF2   <-----------GT1                     --------->AHL20(2) <---------LBD16<---------AHL20(1)    <---------AHL20(2)                      <---------AHL20(2)    - -------->MYB52(1) <---------AHL20(2)--------->AHL20(2)                <----------DOF2      ---------   attcacggtaaatttaaatattttttgaaagttcaggtattaaataacatttttccctttctcaaactacattcttttttttaaatgattttgtcaaagc  13317100                               <---------YAB1                               --------->AHL20(2)                               <---------AHL20(2)            --------->ZAT6                 ----------->HVH21                    --------->TOE2(3)              --------->DAG2   --------->AHL20(1)   --------->ARR11(3)                 --------->AHL20(2)             ---------->DOF2  --------->AHL20(2)    <---------ARR11(3)           ----------->GT1 -------->At4g35610           <---------AHL20(2)    --------->GLK1(2)      --------->YAB1          -- ->DOF2--------->AHL20(2)<---------ARR11(3)    ----------->GT1----------->GT1   XXXXXXXXXXXXXXXXXXXXX   tacgctgaataaaaaaaaagtgaccgagataattttattgattcaaatgtggaaaatcttagaacagtacataagaatgaaaaccgaaataaaaaaacaa  13317200               --------->TOE2(3)                        ---------->DOF2         --------->YAB1                                ---------->DOF2        <---------YAB1<----------ID1                   --------->MYB52(1)       --------->AHL20(2)                         --------->GLK1(1)                                --  <---------YAB1    ---------->DOF2      <---------HSFC1(1)                                      ---- ------->GLK1(2) --------->AHL20(2)      <---------HSFB2a(2)                            --------->LBD16 >MIR833-3P    --------->TOE1(3)         --------->HSFB2a(2)  ---------->DOF2      ---------->DOF2 --   gaatatgatttttataacattaaaaagacaaaaacaaatttgtctagaagagaaacccaaaggccaaagtggctaccgaggcgaagaaagcggggatggc  13317300                                                 <-----------RAV1(1)                                           <---------ATERF1(1)                                           --------->ATERF1(1)                                           --------->At4g35610                                           <------NtERF2                                          ------>NtERF2                                         --------->ANAC46                              --------->ANAC58                 <------ZmHOX2a(1)      <---------LBD16                                --------->ANAC46              <--------P            <---------ALFIN1                                   --------->RAP2.6(2)           <---------TOE2(2)        --------->AtMYB61     --------->ZAT14              --------->DEAR3(1)    <---------HSFB2a(1)            --------->MYB46(3)     --------->LBD16              --------->ANAC58    <---------HSFC1(2)     --------->ALFIN1<---------At4g35610                         ------->GAMYB    --------->HSFB2a(1)  <---------ZAT2 --------->LBD16   <---------ZAT14             --------->MYB46(3)    --------->HSFC1(2)   <---------At4g35610  <------NtERF2                      --------->AtMYB61   --------->ANAC58      --------->ZAT2--------->DEAR3(1)--------->DEAR3(1) ------>NtERF2 -----------   --------->ANAC58      --------->At4g35610--------->ATERF1(1)   --------->ANAC58  <---------ARR14(2) ------->ANAC58 <------MYB83    --------->ATERF1(1)     --------->ANAC46    <---------ATERF1(1)  <--- ----------------->WRI1 <---------ARR14(2)<---------ATERF1(1)     --------->ANAC58  --------->ARR14(2) ------->ANAC58 <------MYB46(1)<---------ATERF1(1)<-------GAMYB ---------->DOF2------>NtERF2 --------   caaggaagcatcggaggtaggactcggagctggagcctccaccgcggcagcctgttgcaccgcagagaaagccatcgctgccaccaaaaccgccacaaag  13317400                   <---------MYB52(1)                                             <---------ANAC58                 --------->ATHB12                                                 <---------ANAC58        <---------ICU4                              --------->ANAC58              <---------ANAC46       <---------YAB1                 <---------ARR14(2)                       *TSS >RAV1(1)      ------>NtERF2        <---------MYB46(3)                       <---------ANAC46 ------GLK1(2) >>>>>>>>>>>>>>>>>LFY--------->ALFIN1 --------->ANAC58    <---------ZAT6 -->DOF2--------->ATHB12    --------->ZAT6    ---------->DOF2         <---------ANAC46        -------   agtctcatcttcattgcctccattgggttatctctaggtggttcttgagaaagcacgaagagactatatgtttagtgttttgtggtgtgttttgatgtgt  13317500                                                           <-----------GT1                                                          <---------ZAT14                                                         <----------DOF2                   <--------HAHB4                                                      <-----------GT1                      <---------ICU4             ----------->TBP                        <-----------GT1                        --------->YAB1         <---------ANAC46                          <---------ICU4                         <---------ATHB12  <---------ANAC46                       <---------ZAT2  <---------DAG2<-----------GT1  --------->WOX13(1)  <---------ANAC58            ------->TEIL         --------->YAB1    <---------WOX13(1) <-----------GT1  <---------ANAC58           <---------AtLEC2     --------->ICU4  <---------YAB1       --------->AHL20(2) -->ALFIN1 <-----------TBP  <-------TEIL--------->MYB52(1)--------->ZAT14              <---------AHL20(2)   tgtgacttgtggtttatatatacacatagatgcatgtaaggccaactgtgtaattatcactttacagtttgattaacacatcaacacaattaatcatttt  13317600                                                                        <------ZmHOX2a(2)                                                                       --------->ARR11(3)                                                                       --------->AGP1                                                                       <---------ARR11(3)                                                                      --------->GLK1(1)                                                                 --------->ZAT2                                                                 <---------At4g35610                                                                 <---------ZAT2                                                                 --------->At4g35610                                                                --------->MYB52(1)               ----                                                            --------->ANAC58             ----------->GT1                      <------MYB46(1)                       --------->ANAC58       ---------->DOF2                      <------MYB83               --------->WOX13(1)  ----------->ARR10 ---------->DOF2       <---------AHL20(2)          <----------DOF2        ---------->DOF2------>ZmHOX2a(2)   --------   cgaattgttttaattctttgtatttggtgaacaaaaactttattagcacatcaatctctgtaaagccaactgagatcttagttgaaaaagaaagaaaaaa  13317700                     <---------At4g35610                     --------->ZAT2          <----------DOF2                     --------->At4g35610    <----------DOF2                     <---------ZAT2 <-----------HVH21                  --------->AHL20(2)                   <-----------RAV1(2)      <---------DAG2             --------->AHL20(1)             --------->ZAT14       <---------TGA2(1)                   <---------AHL20(1)             <---------ZAT14       <---------bZIP60(1)            --------->ICU4 ----->AHL20(2)   <---------ZAT14  --------->bZIP60(1)<---------AHL20(2)    <---------AHL20(1)      < ->AHL20(2)<---------------AtSPL3 --------->MYB59     <---------YAB1 ------->TEIL       <----------DOF2   taaacagttggaaagagtactgcagctgattttagttatgtcatcgccttttgttttttattgtagaaatgaatataatatgttttagttctttgtattt  13317800                                          --------->YAB1                                       --------->YAB1                                         -------                                    --------->YAB1                                     <---------ANAC46                        <---------HSFB2a(1)                                            <---------MYB46(3)                        --------->HSFB2a(1)      ---------->DOF2                       ----------->GT1 -----------GT1      <------ZmHOX2a(1)<---------YAB1       <------ZmHOX2a(1)    ----------->HVH21  --   tttaactaatacagttcatagtaggaacgttttctctctgataataagagtgaaagaaataggaaactgtttttttttttctgtgacggtcgtgaaatga  13317900                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                         <----------DOF2                         ----                                                       --------->ZAT18                          <<<<<                                                     <-------MYC3                               <----                                        <---------WOX13(1)    ----------->GT1                   <----                                      --------->ATHB12 <---------ZAT18                          <<<<<                        <---------At4g35610          ------->MYC2    --------->ATHB12           <----                        --------->At4g35610          ------->MYC3   --------->AHL20(2)          -----                --------->ANAC58     <---------AHL20(2)--------->ZAT14 <---------WOX13(1)       <<<<< -->ICU4 --------->CCA1(2)<----------DOF2    <---------MYB46(3)     <---------AHL20(2)       -------- --------->GT1  --------->ANAC58     <---------YAB1  <-------MYC2   <---------YAB1          ---------   atagaaaatagataagagaagcaatgagctgtttggaatttgattgatggttccatgtgctctctggtatataattggctcaatccatttctcccccaat  13318000  Previous    Next  AGI:  At4g26320.1    Description:  AGP13 (ARABINOGALACTAN PROTEIN 13). Identical to Arabinogalactan peptide 13 precursor (AGP13) [Arabidopsis Thaliana] (GB:Q9STQ3) Range:  from: 13317109    to: 13317479    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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