Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->At4g35610                                --------->ARR14(2)       <---------REM1(2)                               --------->At4g35610       <---------ZAT14                    --------->At4g35610                  --------->ZAT14                   <---------HSFB2a(1)    --------->MYB46(3)  ---------->DOF2                   --------->HSFB2a(1)  <---------ARR14(2)  --------->ANAC46      <---------ANAC46   ---------->DOF2--------->ARR14(2)--------->ANAC46 -----HSFB2a(2)  ---------->DOF2<---------ARR14(2) --------->ANAC46                                -- ---->HSFB2a(2) ========================HOX2a_HOX2a--------->ANAC58                           ------- -->At4g35610   <------ZmHOX2a(1)<------ZmHOX2a(2) --------->ANAC58--------->CCA1(2)          <------   ggaaaatggagtagaagaggaaagctccaaagcagatcagaagaaccacaaacacgctctacacaaaagataaacacaaacttacttaagaaacagaact  13288600                                                                                      ---------------                                                                                      --------->SPL7                                                                                      ------->TEIL                                                                                     ------>MYB83                                                                                     --------->MYB52(1)                                                                                     ------>MYB46(1)                                                                                   <---------MYB59                                                                                 --------->MYB52(1)                                                                                --------->CCA1(2)                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                                         --------->ANAC46                 ------>ZmHOX2a(1)     -----                                  <------ZmHOX2a(2)                 <---------At4g35610         =====                                 --------->ARR11(3)                 --------->At4g35610--------->HSFB2a(1) ---->ZmHOX2a(1)                 <---------ARR11(3)      <---------At4g35610   <---------ARR14(2) -->GLK1(1)                  --------------------->WRI1  --------->At4g35610   --------->ARR14(2) --- ---GLK1(1)      --------->AHL20(2) --------->KAN4(2) <----------DOF2    --------->TOE2(3)     ------   cctcaaaattttgcagaaattgaatattgttcttagatcataccctccattgaagactttgctgagcatgagcttcctcaagataccgaacgtactcctc  13288700                                                                                                    <                                                    --------->ARR14(2)                           <---   ----------->GT1                                  --------->GLK1(2)                            <--- >AtSPL3   ----------->RAV1(1)             <---------ANAC58                                      ---- ------>RAV1(2)                            <---------ANAC46         --------->LBD16              <--- ======================RAV                 <---------ANAC58        --------->HSFB2a(2)           <--- --->ZmHOX2a(1)           --------->AHL20(2)<----------DOF2        <---------HSFB2a(2)           <--- >ZmHOX2a(1)     --------->YAB1       ------->TEIL  <---------ARR14(2)  <------ZmHOX2a(1) <----------   ctgctctgtaaaacgacagtgatagcaataaactattacgaacttgcttttacaaatctgccaaaaattccagaggatgagagaaacaaaataaaccttg  13288800 ---------ARR11(1) ------ANAC55(1) ------ANAC58  --------->ARR14(2) ----->ANAC55(2)    --------->O2                  --------->YAB1 ------ANAC58  <---------ARR14(2)                <---------YAB1              ------>NtERF2 ------ANAC55(2)    <---------O2            ------->TEIL    <-----------HVH21--------->LBD16 ------ANAC46  --------->GLK1(2)       <------ZmHOX2a(1)    <-----------TGA1--------->ANAC46 -GT1      <------NtERF2           <------ZmHOX2a(1)       --------->ANAC46<---------LBD16         --   cgtatcaataggccgagaatcgacgtcttcagaagtaggaaggacgaacttatcatcatcttcgtcacgacgagttctccgccattttctcgctaacttc  13288900                                              <------ZmHOX2a(1)                 *TSS                                            --------->MYB59                     ---------->DOF2                                          --------->ICU4  --------->YAB1       ------->GAMYB       -- ------->ATHB12                    ----------->GT1       <---------ATHB12     --------->ANAC46     --   ttcatttgatttttcttcagattgcagaagtagaagatggagaaattaggaaaacttcaatgagcatcatcgtttcttcaacgaaagtgtctccagccaa  13289000                                                                           <------MYB46(1)                                                                           <------MYB83                                                                        <---------ANAC46                                                             <---------ANAC58                <-------                                                             <---------ANAC58               ---------        <---------At4g35610                               <---------MYB52(1)    <---------At4g35610     ---------->DOF2                               --------->ATHB12   --------->LBD16       <--------   <----------DOF2                               <---------WOX13(1)   ------>NtERF2    ----------->GT1 ------->ANAC58                                 <------------CBF    <---------LBD16 --------->ALFIN1 ------->ANAC58                                --------->ATHB12<---------CCA1(2)--------->At4g35610   aacgcctttaagctacggcctattaagaagcccagcccatagtttagcaagattgattcggtttcttatctccggcttggtttgctgtgttgaaataaat  13289100                                                                                           --------->ATHB12                                                                                          <---------ATHB12                   --------->ALFIN1                      <---------AtMYB61          --------->MYB52(1)                 <---------TGA1a                   <----------DOF2               <---------ANAC55(2)                 =============================================bZIP_DOF           --------->ANAC58              =============MYC_MYB                 --------------->AGL15         --------->ANAC55(2)              ------->GAMYB                        <---------DAG2                --------->ANAC46     <---------AHL20(2)                            <---------------AGL15         --------->ANAC58     --------->AHL20(2) <---------MYB59           <-----------------AGL3         --------->ANAC55(1)    --------->AHL20(2)<---------PCF2              =================================================== --AHL20(2)  --------->ANAC46                     <-----------------AGL2      <---------ZAT18 >AHL20(2)   --------->ANAC58                --------->ZAT6                   <---------ZAT14 -AHL20(2)   --------->ANAC58   <<<<<<<ZML2<-----------GT1                    --------->ZAT18    <---   gggctatttaattcaacgcaagtgggcctaactagaacaatttagttacactactttttttggtcgcaaaactacaagagtacacgtaacgaatgattta  13289200                                                                                          --------->TOE2(3)                         <---------------AGL15                                           --------->YAB1                        <-----------------AG                                        <---------At4g35610                        <-----------------AGL1                                      --------->At4g35610                    ----------->GT1                                            <---------ANAC58                   --------->DAG2                                              <---------ANAC58  <---         <---------CCA1(1)               --------->ANAC46                      <---------ANAC55(2)         <---------RVE1(1)            <---------ARR11(3)                  <---------AHL20(2)    -----        --------->ARR11(3)            --------->ARR14(2)           ------->TEIL--------->ANAC55(2)        <---------ARR11(3)            <---------ARR14(2)         --------->ZAT14 <---------MYB52(1) <     <---------TOE2(3)  ============================================================================= ========================================MADS_MADS      <---------ATHB12 --------->AHL20(2)   ------- ------TOE2(3)   ---------->DOF2----------->GT1    ------->TEIL  <---------ZAT14--------->LBD16<-----   agggattagggatatttcagaaaggtaacacatatggcaatatatgccatatgaatcaaacattcaatgcaccgatttaatccgtgagcaaacataaata  13289300                 --------------->AGL15                 <---------------AGL15                                       --------->LBD16       <---------YAB1                                              <-----------GT1      <-----------GT1                                            <---------AHL20(2)      --------->YAB1 ------YAB1     <-----------------AG                    ------>ZmHOX2a(1)   --------->ANAC46      <-- ---->AHL20(1)  ----------------->AGL3              --------->ARR14(2)     <---------LBD16      ----- ---------YAB1  ----------------->AGL1              <---------ARR14(2)   <-------MYC3   <---------YAB1 ================================MADS_MADS         <---------CCA1(2)     --------->ARR14(2)<---------YAB1 -->ICU4        ----------------->AG          <-----------GT1   --------->AHL20(2)--------->AHL20(2) ----ICU4 ------>ZmHOX2a(1)             <-------TEIL<---------ARR11(3)   ------->MYC3 --------->YAB1   ttatgaattatcctcgtttccatattagttaagcattttagattcatttttctatatcctctctgatttaatccatatgcgcaaatatttatgatgaatt  13289400                                                           --------->ARR11(3)                                                           <---------ARR11(3)                               <-------TEIL             --------->AHL20(2)                          -                    --------------->AGL15      <----------DOF2         --------->WOX13(1)  --------->DOF5.7(2)                   <---------YAB1              ------>ZmHOX2a(1)     ------------>CBF     --------->TOE1(3) -------YAB1      ------------>CBF          ---------->ID1<---------CCA1(2)               --------->TOE2(3) ---->YAB1       <-----------GT1        <----------DOF2 <---------AHL20(2)      --------->TOE2(3)  --   atacttagttccatatgtattacaatttttagattcattcttctttatccttttcgatttaaatcttcgtagtcaattactcccttaaaaaacgttatca  13289500  Previous    Next  AGI:  At4g26240.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO65405.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 13286783    to: 13288980    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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