Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ICU4                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                                    <---------RAP2.6(2)                                                                                    <---------RAP2.3(2)                                                                                    <---------ANAC46                                                                                   <---------At4g35610                                                                               <---------bZIP60(2)                                                                               <---------ANAC58                    <---------ATHB12                                           <---------ANAC58                   ------>MYB83                                                <---------REM1(1)                   ------>MYB46(1)                                    --------->GLK1(2)    <---------YAB1                  --------->WOX13(1)                                  <---------ARR14(2) <---------At4g35610             <---------ZAT18                                    --------->ALFIN1  --------->MYB52(1)             <---------SPL7                                   --------->LBD16 <---------TOE2(3)     -             --------->ZAT18         --------->LBD16        <---------LBD16  <---------DOF5.7(2) <---            <---------ANAC58   --------->ANAC46           --------->ARR14(2)--------->WRKY12---------            <---------ANAC58   ----------->HVH21          <---------ARR14(2)----------->HVH21 <------      --------->WOX13(1)       <---------ETT(1)       <-----------RAV1(2)  --------->DOF5.7(2)------- >bZIP60(1)--------------->AtSPL3  <---------LBD16  <----------DOF2   --------->ARR14(2)<---------MYB46(3)   ctgggtaccaattagcgtaccaatcgaacttatccgacccgggttcgaatagggcttcaggttccggtggagaattcgttgacgtagcggctgatgatga  13083000                                              --------->DAG2       --------->YAB1                 --------->LBD16                 <---------ANAC58 <---------MYB46(3)                   <---------MYB46(3)              <---------ANAC58 -------->ALFIN1  <---------MYB46(3) <---------ANAC58               <------MYB46(1) ------AtMYB61  <-------GAMYB        <---------ANAC58               <------MYB83 >YAB1<---------YAB1                 <---------ANAC46       --------->CCA1(2) ---YAB1       <---------MYB46(3)   <---------LBD16     <------ZmHOX2a(1)                 ----------- -->ICU4     <---------LBD16   --------->ATHB12     --------->ICU4<--------P              --------->At4g35610   tggtggtgatgatactgcggttgtgaatcgacttgatttgcgggtgataagggaattaggagaaatgggtaggcttggattggagaaggaacatctgaaa  13083100                                                                    <---------AtMYB61                                                                    --------->ALFIN1                                                                  <---------ANAC58                                                                  <-----------RAV1(1)                                                                  <---------ANAC58                                                                <---------ANAC46                                                              <-------GAMYB      ------->GAMYB                                                             <---------ANAC58   <---------LBD16                                                             <---------ANAC58  --------->MYB52(1)               --------->ARR14(2)                            <---------ANAC46  -------->P               <---------ARR14(2)                       <---------AtLEC2      ------->GAMYB     <---------ANAC46                              --------->HSFB2a(1)        --------->MYB55(1)     <---------ANAC58                              --------->At4g35610       --------->MYB46(3)     <---------ANAC58                              --------->HSFC1(2)        <---------MYB52(2)     <---------ANAC55(2)                           <---------HSFC1(2)<---------ANAC46       ---------     --------->ANAC55(2)                           <---------HSFB2a(1)  <---------MYB46(3)  ---------  <---------ARR14(2)                               --------->ZAT2 <---------ANAC46--------->LBD16   - >RAV1(2)      --------->GLK1(2)                   <---------At4g35610  ----------->GT1--------->CCA1(2)   cgaggtttcgtattgagaattcggagcgatggaagagcgcatgcagcaagagcagcttccatggcgttgtgtggtggtaacaaccggagagacgaagcaa  13083200                                                                                          <--------HAHB4                                                                  <------ZmHOX2a(1)       --------->YAB1                                                               <-----------RAV1(2)        <---------ICU4                                                               <---------LBD16           --------->ICU4                     <----------DOF2                       --------->ARR11(3)            <---------YAB1                ------>MYB46(1)                           --------->CCA1(1)            --------->YAB1                ------>MYB83             --------->MYB52(1)<---------ARR11(3)    <------------CBF      *TSS   ------------>CBF   --------->AHL20(2)        --------->RVE1(1)   ------------>CBF >ANAC58   <-----------GT1      <---------AHL20(2)    <---------AHL20(2)    <-----------GT1 >ANAC58 <----------DOF2       --------->AHL20(2)     --------->AHL20(2)  <---------AHL20(2)   <----- --------->DOF2--------->WOX13(1)--------->YAB1      --------->AHL20(2)------->TEIL --------->YAB1   atgaaagtcttctttaccaatctcttttgacaaatttataatccaacggttcaaattaaaatatctcaggatgtatttaaaccaattgataatcattttt  13083300                                                                       --------->ALFIN1                                                                   ---------->DOF2                                                              <------NtERF2                                               <---------ANAC46  <------NtERF2                                               <---------ANAC58 <---------DEAR3(2)                                               <---------ANAC58 ------>NtERF2                                          <---------MYB46(3) <-----------HVH21                                          <---------DEAR3(2) <---------ATERF1(1)                                         <---------ANAC46    <---------SPL7                                         <---------DREB2C(2) ------>NtERF2                         <-                                         <---------DEAR3(1) --------->DEAR3(1)                     --                                         <---------At1g77200<---------DEAR3(1)                  -----                                      --------->ALFIN1<---------ARR14(2)                     --------                            ---------->DOF2 <---------MYB52(1)--------->ATERF1(1)           ---------       --------->YAB1    <---------WOX13(1)<-------GAMYB    <---------ANAC46                <--------     <---------TOE2(3)  <------------CBF <---------DEAR4(1)--------->RAP2.3(1)          <----------DOF2 <----------DOF2     <---------MYB52(1)<-----------HVH21--------->DEAR3(2)              ============= ------GT1         ----------->GT1---------->DOF2<---------ZAT6<---------DEAR3(1)       ------>ZmHOX2a(1)   ctggtttaatgaaaactaaaccggttaattgaaagagaaagtgtcggttgagtgtgaaaccggcgtcggcaaagtgagggtataagggtcctttccagac  13083400                          <---------O2                          --------->bZIP60(2)                          --------->ANAC46                          --------->ANAC58 --------->ANAC46         --------->TGA1a --------ALFIN1           --------->O2 ------->AtMYB61          <---------TGA1a                                            <------ZmHOX2a(2) ---->ANAC46              --------->ANAC58                                     <----------DOF2 ->ANAC46                <---------TOE1(2)                                   --------->At4g35610 >HSFB2a(2)     *TSS    <---------ALFIN1                                     <---------At4g35610 -HSFB2a(2)    ------------>CBF                        --------->CCA1(2) --------->TOE2(3)<---------ARR11(3) ===================================bZIP_DOF        ----------->GT1   --------->RVE1(1)   --------->GLK1(2)   accacagcatcagtttcttcaatctcccacgtctgagattgaaaagtttgggagaagataaacaaactcaaaatacctcagctttagatcaaaatctaaa  13083500                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            >>>>>>>>>GATA-2                                  --------->SPL7                     <---------ANAC46                                      <---------SPL7                <---------MYB46(3)                                        <------MYB46(1)               <---------AtMYB61                                          <------MYB83             <---------ANAC46--------->CCA1(2)                           <---------------AtSPL8           <---------ZAT14  >>>>>>>>>GATA-4                              <---------------AtSPL3           --------->ZAT14  <---------ARR11(3)                        --------->ARR14(2)           --------->ZAT18  >>>>>>>>>GATA-3  --------->ARR14(2)       <---------ARR14(2)        <---------ANAC58    >>>>>>>>>GATA-1  <---------ARR14(2) --------->DAG2        <---------ANAC46    --------->AGP1   --------->GLK1(2) ---------->DOF2   --------->GLK1(2)        <---------ANAC58    --------->ARR11(3)        <---------MYB46(3) --------->MYB59   aacaagagtttcgtgcagtggtttcttagagatctagtagattagagaatttggatttgttgaagaaaagtggatttggtacgattctataggtttcctt  13083600                                                                                             <-------                                       <---------ANAC46                                     <--------P                              --------->ZAT2                                               <-------GAMYB                              <---------ZAT2                   <---------ANAC58           <---------MYB46(3)                        --------->TOE1(2)                      <---------ANAC58          <---------AtMYB61                        --------->TOE2(2)               <---------ANAC46                <------NtERF2                      <---------ARR14(2)     <---------AHL20(2)<---------ANAC46       <---------DEAR3(1)                      --------->GLK1(2)<---------ANAC58 <---------ANAC58              <---------ANAC58                      --------->ARR14(2)  ----------->GT1   <---------CCA1(2)         <---------ANAC46                     <---------GLK1(2) <---------ANAC58 <---------ANAC58              <---------ANAC58           <---------YAB1     --------->At4g35610      <-------TEIL             --------->ATHB12   <-       <---------At4g35610    <---------At4g35610  <---------TOE2(3) ---------->DOF2 <---------LBD16   cttctctgaagctactatagagagaatctgcgagctcaatttcgtagtaaattagggttcgtgtttcttggtaaagatagaatcaatggcggaggttgtt  13083700                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                                                                              -------                                                          <------ZmHOX2a(2)                   <------NtERF2     <---------ARR14(2)                                 --------->At4g35610        ------>ZmHOX2a(2)     --------->ARR14(2)                  --------->MYB46(3)        <-------TEIL  <---------ARR14(2) --MYB46(3)  ----------->HVH21         --------->MYB52(1)--------->AGP1 ---------->DOF2      -------- --------ZAT18             <------ZmHOX2a(2)            <---------At4g35610      --------->ARR14(2)   ctgcacatatacgatgtgacgaacagtggatcagagaagactaacaacaccatagttcagatcaataggttcttcaaagacgggatcggtcttggcggta  13083800    --------->ANAC46                     ------>ZmHOX2a(2) ------>KAN4(2)                        <---------ARR11(3)                    ------->MYC3 ------KAN4(1)                         --------->ARR11(3)                    <-------MYC2 ----->KAN4(1)               <---------ALFIN1                                <-------MYC4 -------TaMYB80             --------->ZAT18                                  ------->MYC2 -----KAN4(2)               <---------ZAT14                           --------->At4g35610 ---->ARR14(2)              --------->ZAT14                           <---------At4g35610 ----->TaMYB80 --------------->AtSPL8  <---------ARR14(2)     --------->WOX13(1) ------->TEIL -->At5g28300  --------------->AtSPL3  --------->ARR14(2) --------->WOX13(1) <-------MYC3 --->GT1  <----------DOF2 --------->ANAC46         <----------DOF2  --------->REM1(1)            <---   tattccacagcgctattcaggtactactactccactgcctcgatcttcttcgtctttagtctatcaatctacatctgcacatgtatcgatgatgtctctc  13083900  Previous    Next  AGI:  At4g25650.1    Description:  ACD1-LIKE; electron carrier. similar to ACD1 (ACCELERATED CELL DEATH 1) [Arabidopsis thaliana] (TAIR:AT3G44880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22069.1); contains InterPro domain Rieske [2Fe-2S] region; (InterPro:IPR005806); contains InterPro domain Pheophorbide a oxygenase (InterPro:IPR013626) Range:  from: 13080910    to: 13083206    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g25660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49475.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580) Range:  from: 13083416    to: 13085197    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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