Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->HSFB2a(2)      --------->AHL20(2)                                     --------->At5g28300          --------->At5g28300  <---------ICU4                    ----------->GT1              ----------->GT1 <---------YAB1                    --------->ZAT6             ----------->RAV1(1) ->AGL2      ------->TEIL        <-----------GT1        ----------->GT1<---------AHL20(2)       ----- ->AGL3 ------>ZmHOX2a(1) <-------TEIL       <-----------GT1 --------->REM1(1)------->TEIL---------->DOF2   cttataattcctctgtatgttctcttgattcattttcacagtaaatttctcgattcgaaagttacaacagtaaaaaaatgaagctagagagtgaaagaga  13078700                                 <---------ANAC55(2)                                 <---------ANAC46                               --------->MYB52(1)           <---------ZAT2                              ----------->TGA1              --------->At4g35610             <--------                              ----------->HVH21         <------NtERF2                    --------->ARR11(3)                          --------->DEAR3(2)          <---------ANAC46                   <---------ARR11(3)                          <-----------------AGL1      <---------DEAR3(1)             ---------->DOF2                          ----------------->AGL1     <---------LBD16              ----------->RAV1(1)                      --------->HSFC1(2)             <------NtERF2               <---------ETT(1)                     <---------------AtSPL3          --------->ATERF1(1)         --------->DREB2C(2)         --------->MYB52(1)   --------->WRKY12      <---------ORA47(2)          --------->DEAR3(2)      --------->ANAC46<---------HSFB2a(1)           <---------RAP2.3(1)      ----------->HVH21      --------->ANAC58<---------HSFC1(2)           <---------RAP2.3(2)     <---------O2  --------->AHL20(1)      --------->ANAC58--------->HSFB2a(1)          <---------DEAR3(1)      --------->O2 --------->YAB1 ------>GT1      <------ZmHOX2a(1)  ---------->DOF2<---------RAP2.3(3)  --------->DEAR3(1)--------->CCA1(2)   gtaataccaagaaaccgaaggagaaggtaccgatgacggaaagagagatagagacggcggagagctcgacttcgccgatgtgaccgacaaagatattagt  13078800                                              --------->At4g35610                                           <---------At4g35610                     <---------At4g35610   --------->At4g35610              --------->ARR14(2)      <-----------RAV1(2)              <---------ARR14(2)    ----------->RAV1(1)            --------->LBD16         <---------ALFIN1   --------->ANAC46    <---------MYB59  --------->At4g35610 <------ZmHOX2a(1)   <---------At4g35610           --------->ANAC46  --------->YAB1   --------->At4g35610          ------->TEIL  <---------At4g35610 -YAB1     <---------ANAC46    <-----------GT1--------->ZAT2       ------>NtERF2                  ---   gactgagctaactccgtattggcagatgatgttgaaccccacaggagcagctatcatccacaacttggccgactctgtagataagactcgtttcacatcg  13078900                                                                   <-------TEIL                                                               <---------DEAR3(2)                                                             <------NtERF2                                                            <-----------HVH21                                                            ------>NtERF2                                                            <---------SPL7                                                           --------->O2                                                           <---------ANAC46                                                           --------->RAP2.3(2)                                                           --------->DEAR3(1)                                                           <---------O2                                                           <---------DEAR3(1)                                                           --------->RAP2.3(3)                                                          --------->RAP2.3(1)                                                          --------->RRTF1(1)                                                          --------->ORA47(2)                                                          --------->ATERF1(1)                                                          <------NtERF2                                                          --------->RAP2.6(1)                                                          --------->DEAR4(2)                                                          --------->ERF1                                                         <---------ATERF1(1)                                                         ------>NtERF2                                                         --------->ABI4(2)                   ------->GAMYB             <------NtERF2                               <---------RAP2.3(1)                 --------            --------->LBD16                             <---------DEAR3(1)                   --------           --------->DEAR3(1)                           --------->DEAR3(1)                 ------>MYB83          <---------LBD16                              --------->ATERF1(1)        -------->HAHB4        --------->ANAC46                               <---------ABI4(2)          --------->ATHB12       ------>ZmHOX2a(1)                              ------->GAMYB------>ZmHOX2a(2)       --------->MYB52(1)      <---------ALFIN1                          --------->ANAC58  <------ZmHOX2a(2)        ------>MYB46(1)   --------->ARR14(2)                  <------NtERF2  <---------ATERF1(1)        --------->ICU4   <---------ARR14(2)                 ------>NtERF2   <---------RAP2.3(1)        <---------YAB1  --------->ZAT2                     --------->DEAR3(1)--------->RAP2.3(1) <---------HSFB2a(2)  --------->At4g35610                <---------ALFIN1<---------DEAR3(1)    --------->HSFB2a(2)  <----  <---------ZAT2--------->YAB1    --------->ANAC46 --------->MYB52(1)    --------->At4g35610 --------  <---------At4g35610      ------>ZmHOX2a(1)    --------->ANAC58 --------->ARR14(2)       --------->MYB55(1) ------>WRKY18(1)       ------>ZmHOX2a(1)       --------->ANAC46 <---------ARR14(2)   <-----------GT1   gtccagctcctcgccggagcataatcctcctctacttcgccaccgtgtgtaagcaacggcgccgtcggatccatcttctgaaaatgattaaccaaacgcc  13079000                                                              ------>NtERF2                                                             *TSS                                                             <---------ZAT18                                                             --------->LBD16                                                            <---------ANAC58         <---------MYB52(2)                                                            <---------ANAC58         --------->MYB46(3)                                                            <---------ANAC46  <-----------TBP                                                           <---------LBD16----------->GT1                                                        <-------GAMYB     <---------MYB46(3)                                                       <-----------RAV1(1)<------MYB46(1)           <                                                       --------->MYB52(2) <------MYB83            <-- ->ANAC58                                              <---------MYB46(3)<---------AtMYB61       <--- ->ANAC58     --------->ARR11(3)                  <---------TOE2(3)     <--------P <-----------GT1--- -----ALFIN1  <---------ARR11(3)               --------->WRKY18(1)    <---------MYB46(3)    <-------- ->ANAC46    <---------CCA1(2)      ------>NtERF2 <---------TOE1(3)   --------->ATHB12 --------->MYB52(1)   actcacttctcttctatatctctctctctctctctctctgcctctctgagtcaaggtttgttgcggacttaatggttggtttatataacaaaccgttgaa  13079100                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                                       --------->AHL20(1)                                                                      --------->AHL20(2)                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                                 --------->AHL20(2)                                                                 --------->YAB1                                                                 <---------AHL20(2)        --------->YAB1                                                          <---------ATHB12                 -------->HAHB4       --------->AtLEC2                                   <---------YAB1                   <--------ATHB1     --------->YAB1                      --------->ARR11(3)  <---------YAB1                <---------ICU4    <---------ATHB12                     <---------ARR14(2)  --------->ICU4               <---------ATHB51   ------->TEIL                          <---------ARR11(3)--------->YAB1                 --------->ICU4 ---------YAB1                 ---------->DOF2            --------->ICU4                  <---------ATHB12 -------ICU4                  --------->AHL20(2)     <---------At4g35610                --------->YAB1 ------ATHB12            --------->AHL20(2)  ------>ZmHOX2a(1)<---------ICU4     --------->WRKY38(1) ------>YAB1      <----------DOF2        --------->ARR14(2)-------->HAHB4        <---------ZAT18 -MYB52(1)------->TEIL<----------DOF2   --------->RVE1(1)<---------TOE2(3)       --------->ZAT18   tcatgaatcatgcattttctctttctttaaaataaaagaaaaaaatcctcgtggaagctaatgataattaaaatatatactcgtggactctaataattct  13079200                                                        --------->CCA1(2)                                                       --------->ARR14(2)                       ----------->HVH21               --------->AGP1                  <---------YAB1               --------->AtLEC2           ------>ZmHOX2a(1)              ------>MYB46(1)          --------->TOE1(3)              --------->WOX13(1)          <-------TEIL          --------->TOE2(3)             <---------ALFIN1<------ZmHOX2a(2)                    --------       --------->ARR11(3)               --------->AtMYB61           <-----------GT1       --------->ANAC58       <---------ARR11(3)<---------TOE2(3)------>MYB83 <---------ARR14(2)                 --------->ANAC58  --------->YAB1<---------ICU4   <----------DOF2       <---------ARR11(3)           <---------HSFB2a(2) <---------ATHB12 <---------AHL20(2)    --------->MYB46(3)      --------->AHL20(2)  --------->HSFB2a(2)   tcaatgaaaaatccttaaatattatttgacgatgactttccaccaatccatgcactagatccacaagtatatacatgtctcaatttctggacaagaaatc  13079300                                                      <---------ZAT18                                                      ------->GAMYB                          --------                                                     --------->ANAC58                      <---------YAB1                                                   ---------->DOF2                  --------->ANAC58                                                   --------->MYB52(1)               --------->ANAC58                                                --------->ANAC58                   <---------TOE2(3)                                                --------->ANAC55(2)               --------->MYB52(1)                                                <---------ANAC55(2)             <---------MYB111(1)      <------MYB46(1)                           --------->ANAC58                --------->MYB46(3)      <------MYB83                         --------->ANAC55(2)                  <---------MYB46(2)      <---------MYB46(3)              <---------AHL20(2) --------->ANAC58     ------->TEIL--------->ARR11(3)     <---------AtMYB61                --------->AHL20(2) --------->ANAC58  --------->ANAC55(2)  -----  <-----------RAV1(1)              <---------ARR14(2)--------->ANAC58      <---------ANAC55(2)<------  --------->ALFIN1        <---------TOE2(3)<---------ANAC55(2)    --------->ZAT6<---------MYB52(2) <- ->GLK1(1)          <---------ANAC46 --------->AHL20(2) ------->TEIL    --------->ICU4    <---------ARR11(3)   taatgtgttggttttgtttatgtcttataagattgcagatttaattcgtaacgtaacgcacccgattacctctaattatgtaactaacgaaatatcatta  13079400                                                                                              -------                            <---------------AtSPL3                                            <------                          <---------AHL20(2)                                               <---------ALFIN1                       --------->AHL20(2)                     --------->ALFIN1            --------->MYB46(3)                       <---------AHL20(2)                   <------MYB46(1)             <---------ARR14(2)               <---------ANAC46                             <------MYB83                --------->ARR14(2)               <---------ANAC58                          --------->TOE2(2)             <------ZmHOX2a(1)    <---------ANAC46  --------->AHL20(2)                 --------->TOE1(2)      <-------TEIL -------- ->TOE2(3)     <---------ANAC58 ------->TEIL           <---------TOE2(3)     --------->MYB55(2) ---->YAB1     <---------AtLEC2 <-------TEIL          <---------DOF5.7(2)    <---------MYB46(3) ---YAB1     <---------YAB1 <---------------AtSPL8    --------->MYB52(1)   <---------MYB52(1)<------- --------MYB46(3)     <---------AHL20(2)   <---------LBD16 <---------TOE2(2)--------->ALFIN1 --------   atggttgtgtctattttgcttgtattaatttatgtacgttttgtcttcggagtagataacgtaggtgagggctaatcggtggttcatgaggaaccacgtt  13079500                                                                                  --------->ALFIN1                                                                                =====================                                                                                =====================                                                                                <---------TGA1a                                                                                <---------bZIP60(2)                                                                                --------->O2                                                     =====================================bZIP_DOF                                    <---------HSFB2a(1)                         <---------O2                                    --------->HSFC1(2)                          --------->TGA1a                                    --------->HSFB2a(1)    ===============================bZIP_DOF                                    <---------HSFC1(2)     ---------->DOF2      ====================bZIP_DOF >MYC3                           --------->LBD16     ---------->DOF2 ------>ZmHOX2a(1)   <----------DOF2 -MYC3                          --------->ANAC46  <---------------AGL15         <---------ANAC46    < ->O2                 ---------->DOF2             --------------->AGL15   ----------->HVH21         < --O2  --------->MYB46(3)    <---------ARR14(2)   =================================================== ->ANAC46      --------->YAB1--------->ARR14(2)  --------->TOE2(3)   --------->LBD16 <---------ANAC46   gctatatcaacaatccataagaatgaaagactatccgaagcatccaaataaacttaaaagagaaagtcttcctgatatgacgacgtggtgtctttcttag  13079600  Previous    Next  AGI:  At4g25640.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT4G00350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49464.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49462.1); similar to putative anthocyanin permease [Lycopersicon esculentum] (GB:AAQ55183.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 13076724    to: 13079061    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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