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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR11(3)
--------->
YAB1
-----
<---------
YAB1
------->
TEIL
<---------
YAB1
--------->
AHL20(2)
<---------
ZAT18
<---------
YAB1
<---------
AHL20(2)
--------->
ZAT18
--------->
YAB1
<---------
AHL20(2)
<---------
ZAT6
-----
<---------
YAB1
<---------
AHL20(2)
<---------
ZAT14
<---------
YAB1
--------->
ALFIN1
tttttatcataagtgatttttgtatgttatattggaccttgtataaacagactacagaagaaaattatttatgagaacttgtaatgttagagtggacctc
13073700
<---------
ALFIN1
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
ALFIN1
<-----------
TCP11(1)
<---------
ICU4
<---------
YAB1
-------->
ATHB1
<---------
ICU4
--------->
YAB1
--------->
TOE2(3)
--------->
AHL20(1)
<-----------
RAV1(1)
<---------
YAB1
<----
<---------
ANAC46
<---------
AHL20(2)
--------->
At4g35610
<---------
ICU4
--------->
YAB1
--------->
AHL20(2)
<---------
At4g35610
--------->
ICU4
--------->
TOE1(3)
--------->
ICU4
<-----------
GT1
---->
TOE1(1)
<-----------
GT1
--------->
YAB1
<---------
ZAT18
----------->
RAV1(1)
<----
---->
TOE2(1)
<----------
DOF2
<---------
YAB1
--------->
PCF2
---------->
DOF2
--------->
At4g35610
gtataaactaattatgtgggcttttaccataaactatttatgaaaattattatggcccacaccactataactaaagcccacatatttagcagcccagttt
13073800
<-----
--------->
AHL20(2)
<-----------
GT1
<---------
YAB1
--------->
HSFB2a(1)
--------->
YAB1
<-------
<---------
HSFB2a(1)
-------->
HAHB4
<----------
<---------
GLK1(2)
--------->
ICU4
<---------
AHL20(2)
---
TEIL
--------->
HSFB2a(2)
--------->
REM1(2)
--------->
ICU4
-----
YAB1
<---------
HSFB2a(2)
<----------
DOF2
<---------
ANAC46
<---------
DOF5.7(2)
<
cattgtaagagacatgttcgctctggaactagaattttctggtttttgggtatttgttttcttatgtgtagagaaatgatggtaacgattaaatgttgtg
13073900
--------->
ANAC46
--------->
ANAC58
<---------
MYB52(1)
<-----------
GT1
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
ANAC46
<---------
AHL20(1)
--------->
ANAC58
<-----------
GT1
--------->
AHL20(1)
--------->
ANAC58
<<<<<<<<<<<<<<<<<
LFY
<---------
AHL20(2)
--------->
ANAC55(1)
<---------
GLK1(2)
<---------
YAB1
--------->
AHL20(2)
<---------
REM1(1)
--------->
ALFIN1
----
ANAC46
<---------
ARR11(3)
<-----------
RAV1(1)
<---------
ANAC58
--
ANAC46
--------->
AHL20(2)
<-----------
RAV1(1)
--------->
MYB52(2)
<-----
-
RAV1(1)
--------->
YAB1
--------->
ARR11(3)
<---------
MYB46(3)
<---------
ANAC58
--------->
DAG2
-----------
GT1
----------->
GT1
--------->
ANAC58
----------->
HVH21
<---------
YAB1
---------->
DOF2
tattacaatttacaatggtaagacgattaatatatttacacacaattttgttgttgctgtaacacgttagtgtgtgtgatgatagaatttcataaagctt
13074000
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
CCA1(2)
--------->
YAB1
--------->
ARR11(1)
<------
ZmHOX2a(1)
<---------
YAB1
<---------
ARR11(3)
--------->
ICU4
--------->
ICU4
--------->
ARR11(3)
<---------
TOE2(3)
--------->
YAB1
---------->
DOF2
--------->
AHL20(2)
<---------
AHL20(2)
--------->
TOE2(3)
--------->
At4g35610
--------->
ANAC55(2)
--------->
TOE2(3)
--------
----------->
GT1
<---------
At4g35610
--------->
ANAC46
<---------
ANAC55(2)
---
-----
DOF2
----------->
GT1
----------->
HVH21
--------->
YAB1
----------->
GT1
---------
taactacgaggggcaaaatgttaattctaaatagttgacagcagaaaaagatatgtatacataatataaggattaaaacgtaaataataataaataaggc
13074100
<-------
TEIL
*
TSS
<----------
DOF2
------->
MYC3
--------->
At4g35610
--------->
AHL20(2)
<---------
ANAC58
<---------
At4g35610
--------->
AHL20(2)
<---------
ANAC46
<---------
ZAT2
->
DAG2
<---------
ANAC58
--------->
ZAT2
-------->
GT1
--------->
STY1(2)
<---------
ANAC58
<---------
ATERF1(1)
->
DOF2
----------->
GT1
<-------
MYC3
<---------
ANAC58
--------->
DEAR3(1)
-----
gagttaaattaaaaccctgttaaaaccctagcttgaaacac
atgtataaaaacacttgcgagcgcagcttcatcgccatcgccattctctctctcatcaa
13074200
<-----------
<----------
DOF2
<--------
P
<------
NtERF2
------>
ZmHOX2a(1)
<---------
ATERF1(1)
--------------->
AGL15
------>
NtERF2
<-----------------
AGL1
<---------
ATERF1(1)
--------->
ICU4
----------->
GT1
--------->
ANAC46
<
--------->
ANAC46
----------------->
AGL2
--------->
RAP2.6(2)
<
--------->
ANAC58
<-----------------
AGL2
--------->
DEAR3(1)
------
<----------
DOF2
--------->
ANAC58
<-----------------
AGL3
--------->
RAP2.3(2)
<
----->
DOF2
<----------
DOF2
---------->
DOF2
<---------------
AGL15
--------->
RAP2.3(1)
<-----
aagcttttctccttgattttcgcattctttagagtcttaacgcaaag
atgagacctcctctaactg
gtaagaaccctagccgcctcttctcttttcttca
13074300
<---------
ANAC58
<---------
ANAC58
-------------
ANAC81
<---------
WOX13(1)
---------
ANAC58
----------->
HVH21
<---------
At4g35610
---------
ANAC46
<---------
ANAC58
--------->
At4g35610
--->
ATHB12
<---------
ANAC58
<----------
DOF2
--------->
ATHB12
<-----
---------
ANAC58
<---------
TOE2(3)
<---------
DAG2
--------->
ICU4
---------
----
ICU4
--------->
YAB1
<---------
ANAC46
<----------
DOF2
<----------
DOF2
<----------
DOF2
ttgcttgcttatcagattaacaatggcgagtgacactcttagctcgtttagtctttaaaactttatgtctttagctgaactgattgtcaactttgttctt
13074400
<---------
TOE2(3)
<----------
DOF2
<------
MYB46(1)
<------
MYB83
<--------
P
<---------
YAB1
<-------
GAMYB
<---------
MYB46(3)
--------->
MYB55(2)
<---------
ANAC46
--------->
MYB52(2)
--------->
ATHB12
<---------
ANAC58
<---------
MYB52(1)
<---------
YAB1
<<<<<<<<<
MYB98
<-------
<---------
ANAC58
<---------
DEAR3(1)
--------->
CCA1(2)
<---------
ANAC46
--------->
ATHB12
-----
DOF2
<---------
ANAC58
<---------
ARR14(2)
<------
MYB83
<---------
ATHB12
->
ID1
<---------
ANAC58
--------->
ARR14(2)
<------
MYB46(1)
<---------
YAB1
ttttgcttagaactgtattgggtctgcgttagttctatcggatatagagttgatggttgggttttatgttaaacatggagtctctaatgaatggtctttt
13074500
----
<----
-----
<-----
<-------
<---------
AtMYB61
<-----
<---------
AtMYB61
--------->
ALFIN1
<------
--------->
ALFIN1
--------->
ARR14(2)
<-------
<-------
TEIL
<---------
AtMYB61
>>>>>>>>>
GATA-1
<-------
<---------
ZAT14
--------->
ALFIN1
<---------
ARR14(2)
<-------
<------
MYB46(1)
<-------
TEIL
>>>>>>>>>
GATA-4
<-------
<---------
DEAR3(2)
<<<<<<<<<<<<<<<<<
LFY
>>>>>>>>>
GATA-3
<-------
<---------
MYB46(3)
--------->
ARR14(2)
--------->
At5g28300
<-------
<---------
ANAC46
<---------
ARR14(2)
<---------
ANAC46
<------
NtERF2
--------->
MYB55(2)
<---------
ANAC46
<---------
DREB2C(2)
<--------
<---------
MYB46(3)
<---------
ANAC46
<---------
DEAR3(1)
<---------
DEAR3(1)
<---------
AtMYB61
<---------
AtMYB61
--------->
MYB52(1)
-----------
<---------
DEAR3(1)
<------
NtERF2
<---------
MYB46(3)
<---------
MYB46(3)
--------->
ALFIN1
--------->
ALFIN1
<---------
ANAC58
----------->
HVH21
<---------
MYB46(3)
--------->
ALFIN1
<---------
MYB46(3)
<---------
MYB46(3)
--------->
ALFIN1
<---------
AtMYB61
<------
ZmHOX2a(1)
<---------
ANAC46
--------->
ALFIN1
----------->
TGA1
<---------
MYB46(3)
<---
<---------
LBD16
<------
MYB83
<---------
ANAC58
<---------
MYB46(3)
--------->
ATHB12
---------
---
DOF2
<---------
AtMYB61
<---------
ANAC46
<---------
AtMYB61
>>>>>>>>>
GATA-2
--------->
ZAT2
gtgttcag
gaagtggtggtgggttcagtggtggaagagggcgtggtggatacagtggtggtagaggtgacggtggattcagtggtggtcgaggtggcggt
13074600
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AGI:
At4g25630.1
Description:
FIB2 (FIBRILLARIN 2). Identical to rRNA 2'-O-methyltransferase fibrillarin 2 (FIB2) [Arabidopsis Thaliana] (GB:Q94AH9;GB:Q9SZZ1); similar to FIB1 (FIBRILLARIN 1) [Arabidopsis thaliana] (TAIR:AT5G52470.1); similar to tobacco fibrillarin homolog [Nicotiana tabacum] (GB:BAE91898.1); contains InterPro domain Fibrillarin; (InterPro:IPR000692)
Range:
from: 13074142
to: 13076438
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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