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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                       --------->ARR11(3)
                                                                    --------->YAB1             -----
                                                               <---------YAB1              ------->TEIL
            <---------YAB1                                   --------->AHL20(2)          <---------ZAT18
     <---------YAB1                                          <---------AHL20(2)          --------->ZAT18
   --------->YAB1                                           <---------AHL20(2)  <---------ZAT6 -----
  <---------YAB1        <---------AHL20(2)       <---------ZAT14   <---------YAB1       --------->ALFIN1
 
tttttatcataagtgatttttgtatgttatattggaccttgtataaacagactacagaagaaaattatttatgagaacttgtaatgttagagtggacctc  13073700
                                                       <---------ALFIN1
                                                       --------->ANAC58
                                                       --------->ANAC46
                                                       --------->ANAC58
                                                     <---------ALFIN1
                                                 <-----------TCP11(1)
                                              <---------ICU4
                                             <---------YAB1
                                           -------->ATHB1
                                           <---------ICU4
                                           --------->YAB1
                       --------->TOE2(3)  --------->AHL20(1)
          <-----------RAV1(1)             <---------YAB1                                       <----
          <---------ANAC46                <---------AHL20(2)                           --------->At4g35610
        <---------ICU4 --------->YAB1     --------->AHL20(2)                        <---------At4g35610
       --------->ICU4  --------->TOE1(3)  --------->ICU4                          <-----------GT1
---->TOE1(1)        <-----------GT1  --------->YAB1 <---------ZAT18       ----------->RAV1(1)  <----
---->TOE2(1)     <----------DOF2    <---------YAB1--------->PCF2    ---------->DOF2 --------->At4g35610
 
gtataaactaattatgtgggcttttaccataaactatttatgaaaattattatggcccacaccactataactaaagcccacatatttagcagcccagttt  13073800
                                                                                              <-----
                                                                                     --------->AHL20(2)
                                <-----------GT1                                  <---------YAB1
                              --------->HSFB2a(1)                        --------->YAB1     <-------
                              <---------HSFB2a(1)                        -------->HAHB4  <----------
                            <---------GLK1(2)                           --------->ICU4<---------AHL20(2)
---TEIL            --------->HSFB2a(2)                         --------->REM1(2) --------->ICU4
-----YAB1          <---------HSFB2a(2)<----------DOF2       <---------ANAC46   <---------DOF5.7(2) <
 
cattgtaagagacatgttcgctctggaactagaattttctggtttttgggtatttgttttcttatgtgtagagaaatgatggtaacgattaaatgttgtg  13073900
                                    --------->ANAC46
                                    --------->ANAC58          <---------MYB52(1)
                                <-----------GT1             <---------ANAC55(2)
                            <---------AHL20(2)              --------->ANAC46
                           <---------AHL20(1)               --------->ANAC58
      <-----------GT1      --------->AHL20(1)               --------->ANAC58
      <<<<<<<<<<<<<<<<<LFY <---------AHL20(2)               --------->ANAC55(1)  <---------GLK1(2)
 <---------YAB1            --------->AHL20(2)  <---------REM1(1)    --------->ALFIN1
----ANAC46                 <---------ARR11(3)  <-----------RAV1(1)  <---------ANAC58
--ANAC46                --------->AHL20(2)  <-----------RAV1(1) --------->MYB52(2)            <-----
-RAV1(1)    --------->YAB1 --------->ARR11(3)  <---------MYB46(3)   <---------ANAC58      --------->DAG2
-----------GT1      ----------->GT1 --------->ANAC58   ----------->HVH21   <---------YAB1---------->DOF2
 
tattacaatttacaatggtaagacgattaatatatttacacacaattttgttgttgctgtaacacgttagtgtgtgtgatgatagaatttcataaagctt  13074000
                                                                                       --------->AHL20(2)
                                                                                       <---------AHL20(2)
                                                                                      --------->AHL20(2)
                                               --------->CCA1(2)                    --------->YAB1
                                              --------->ARR11(1)  <------ZmHOX2a(1)<---------YAB1
                                              <---------ARR11(3) --------->ICU4    --------->ICU4
                                              --------->ARR11(3)<---------TOE2(3)--------->YAB1
                                          ---------->DOF2 --------->AHL20(2)    <---------AHL20(2)
               --------->TOE2(3)    --------->At4g35610--------->ANAC55(2) --------->TOE2(3)--------
       ----------->GT1              <---------At4g35610--------->ANAC46   <---------ANAC55(2)    ---
-----DOF2     ----------->GT1  ----------->HVH21       --------->YAB1     ----------->GT1  ---------
 
taactacgaggggcaaaatgttaattctaaatagttgacagcagaaaaagatatgtatacataatataaggattaaaacgtaaataataataaataaggc  13074100
                                                                 <-------TEIL
                                         *TSS                   <----------DOF2
                                     ------->MYC3             --------->At4g35610
     --------->AHL20(2)    <---------ANAC58                   <---------At4g35610
 --------->AHL20(2)        <---------ANAC46                   <---------ZAT2
->DAG2                     <---------ANAC58                   --------->ZAT2
-------->GT1              --------->STY1(2)           <---------ANAC58   <---------ATERF1(1)
->DOF2       ----------->GT1         <-------MYC3     <---------ANAC58  --------->DEAR3(1)     -----
 
gagttaaattaaaaccctgttaaaaccctagcttgaaacacatgtataaaaacacttgcgagcgcagcttcatcgccatcgccattctctctctcatcaa  13074200
                                                                                        <-----------
                                                                                       <----------DOF2
                                                               <--------P     <------NtERF2
                                                      ------>ZmHOX2a(1)   <---------ATERF1(1)
                                                      --------------->AGL15  ------>NtERF2
                                                     <-----------------AGL1  <---------ATERF1(1)
                                         --------->ICU4      ----------->GT1--------->ANAC46       <
                                    --------->ANAC46 ----------------->AGL2 --------->RAP2.6(2)    <
                                    --------->ANAC58 <-----------------AGL2 --------->DEAR3(1)------
<----------DOF2                     --------->ANAC58 <-----------------AGL3 --------->RAP2.3(2)    <
----->DOF2             <----------DOF2 ---------->DOF2<---------------AGL15--------->RAP2.3(1)<-----
 
aagcttttctccttgattttcgcattctttagagtcttaacgcaaagatgagacctcctctaactggtaagaaccctagccgcctcttctcttttcttca  13074300
   <---------ANAC58
   <---------ANAC58
-------------ANAC81                                                            <---------WOX13(1)
---------ANAC58           ----------->HVH21                          <---------At4g35610
---------ANAC46       <---------ANAC58                               --------->At4g35610
--->ATHB12            <---------ANAC58                   <----------DOF2     --------->ATHB12 <-----
---------ANAC58<---------TOE2(3)                         <---------DAG2     --------->ICU4 ---------
----ICU4--------->YAB1<---------ANAC46           <----------DOF2 <----------DOF2       <----------DOF2
 
ttgcttgcttatcagattaacaatggcgagtgacactcttagctcgtttagtctttaaaactttatgtctttagctgaactgattgtcaactttgttctt  13074400
                                                             <---------TOE2(3)
                                                          <----------DOF2
                                                      <------MYB46(1)
                                                      <------MYB83
                                                    <--------P<---------YAB1
                                                   <-------GAMYB
                                                  <---------MYB46(3)
                                                  --------->MYB55(2)
 <---------ANAC46         --------->MYB52(2)      --------->ATHB12
 <---------ANAC58       <---------MYB52(1)       <---------YAB1 <<<<<<<<<MYB98              <-------
 <---------ANAC58  <---------DEAR3(1) --------->CCA1(2)<---------ANAC46             --------->ATHB12
-----DOF2       <---------ANAC58     <---------ARR14(2)<------MYB83                <---------ATHB12
->ID1           <---------ANAC58     --------->ARR14(2)<------MYB46(1)             <---------YAB1
 
ttttgcttagaactgtattgggtctgcgttagttctatcggatatagagttgatggttgggttttatgttaaacatggagtctctaatgaatggtctttt  13074500
                                                                                                ----
                                                                                               <----
                                                                                               -----
                                                                                              <-----
                                                                                            <-------
                                                                             <---------AtMYB61<-----
                       <---------AtMYB61                                     --------->ALFIN1<------
                       --------->ALFIN1                                --------->ARR14(2)   <-------
                   <-------TEIL                   <---------AtMYB61    >>>>>>>>>GATA-1      <-------
                   <---------ZAT14                --------->ALFIN1     <---------ARR14(2)   <-------
                <------MYB46(1)               <-------TEIL             >>>>>>>>>GATA-4      <-------
                <---------DEAR3(2)           <<<<<<<<<<<<<<<<<LFY      >>>>>>>>>GATA-3      <-------
               <---------MYB46(3)           --------->ARR14(2)     --------->At5g28300      <-------
              <---------ANAC46              <---------ARR14(2)   <---------ANAC46          <------NtERF2
            --------->MYB55(2)           <---------ANAC46        <---------DREB2C(2)       <--------
            <---------MYB46(3)         <---------ANAC46          <---------DEAR3(1)      <---------DEAR3(1)
           <---------AtMYB61          <---------AtMYB61        --------->MYB52(1)        -----------
           <---------DEAR3(1)         <------NtERF2<---------MYB46(3)<---------MYB46(3)  --------->ALFIN1
           --------->ALFIN1         <---------ANAC58          ----------->HVH21  <---------MYB46(3)
        --------->ALFIN1<---------MYB46(3)<---------MYB46(3)  --------->ALFIN1  <---------AtMYB61
    <------ZmHOX2a(1)<---------ANAC46 --------->ALFIN1        ----------->TGA1<---------MYB46(3)<---
 <---------LBD16<------MYB83        <---------ANAC58  <---------MYB46(3)  --------->ATHB12 ---------
---DOF2 <---------AtMYB61           <---------ANAC46 <---------AtMYB61 >>>>>>>>>GATA-2 --------->ZAT2
 
gtgttcaggaagtggtggtgggttcagtggtggaagagggcgtggtggatacagtggtggtagaggtgacggtggattcagtggtggtcgaggtggcggt  13074600
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AGI:  At4g25630.1   
Description:  FIB2 (FIBRILLARIN 2). Identical to rRNA 2'-O-methyltransferase fibrillarin 2 (FIB2) [Arabidopsis Thaliana] (GB:Q94AH9;GB:Q9SZZ1); similar to FIB1 (FIBRILLARIN 1) [Arabidopsis thaliana] (TAIR:AT5G52470.1); similar to tobacco fibrillarin homolog [Nicotiana tabacum] (GB:BAE91898.1); contains InterPro domain Fibrillarin; (InterPro:IPR000692)
Range:  from: 13074142    to: 13076438    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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