Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ------>ZmHOX2a(1)                           --------->TOE2(3)                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                        <---------ARR14(2)                        <---------ARR11(3)                                      ---------->DOF2 -----            --------->MYB46(3)                                                --------->HSFB2a(2)   --------->ANAC46     --------->ARR11(3)                                    <---------HSFB2a(2) -------->ARR14(2)      --------->ARR14(2)                                <---------ANAC58      ----- ---------ARR14(2) --------->YAB1                                 <------ZmHOX2a(1)             ----- ---->YAB1----------->RAV1(1)         <-------TEIL--------->TOE1(2)       <---------ANAC58  <--------   agaatacgaccccaacaacactcatagatcctaaatcacgtccatagcaaaacttgggacaaaccagaggactattgcttccaaaagagtcattttacaa  13055200                                                                                                    <                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                 ----        --------->GLK1(1)                                                            --------->HSFB2a(1)       <---------ARR11(3)                   --------->DAG2                           <---------HSFB2a(1) ---->ANAC46         ---------->DOF2  --------------->AGL15             <------ZmHOX2a(1)        <--- ---->ANAC58     ----------->RAV1(1) --------->ANAC55(2)              <---------TOE2(3)      <------- ---->ANAC58    <----------ID1   <----------DOF2                  --------->ZAT14    <---------HSFC1(2) ---GT1--------->ARR11(3) <---------GLK1(1)---------->DOF2        <---------ZAT14    --------->HSFC1(2)   gctataacagatatcaagacaacaaaagaattctcctttacataataaagtcactcactcagaaacagtactgaggaacaaataagaagcttcgcagtca  13055300                          --------->ARR14(2)        --------->AtLEC2  <---------ARR14(2)   --------->ANAC46      --------->At4g35610   --------->ANAC58      <---------At4g35610   --------->ANAC58   ------->GAMYB -------TEIL  --------->DAG2 <---------ANAC58 ------->CCA1(2)     --------->ANAC46                 ---------->DOF2 ------>ARR14(2)   <---------DOF5.7(2)             <----------DOF2 -------ARR14(2)  <---------WRKY12                 --------->TOE2(3)          <-------TEIL ----->At4g35610  <---------WRKY38(1)     ----------->GT1        <---------TOE2(3)           -------- ------At4g35610  <---------WRKY45      ---------->DOF2         ---------->DOF2             <-------- ----HVH21   ---------->DOF2 <---------ANAC58      --------->TOE1(3)---------->DOF2       -----------   gatacaagacatacaaaaagtcaacgcagatgcgagagacagaaaagagaaaactttaaaggagattaaagaaagaaacatacattgaagatgagattct  13055400                                                                                   ----------->RAV1(1)                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                                 <---------ZAT18                                                                                 --------->SPL7                                                                                 --------->ZAT18                                                                                --------->ALFIN1  ---                                                                                <---------ATERF1(1) -                                                                               ------->MYC2      ----                                                                               ------->PIF5      ----                                                                               <-------MYC3     -----                                                                               <-------PIF5 <--------                  <---------ARR14(2)                                           ------->MYC3 <--------                  --------->ARR14(2)                                           <-------MYC2--------->ANAC46                 --------->WOX13(1)                                            <-------PIF4--------->O2             --------->ANAC58                                                 <---------ANAC58 <-----      <---------ANAC58                                                        <---------ANAC58 <-----      <---------ANAC58                                                      <------------OsbHLH66----     <---------HSFC1(2)                                       ------>NtERF2<------NtERF2   ==========     --------->At4g35610                               <---------ICU4     ------>NtERF2    --------->TGA1a     --------->HSFC1(2)                                --------->ATHB51  --------->DEAR3(1)--------->ANAC58 --------->MYB52(2)  <---------ALFIN1               --------->TOE2(3)  ------>NtERF2 ----------->RAV1(1) ->GLK1(2)   --------->ANAC46                       --------->YAB1    --------->ANAC46 --------->MYB46(3) -GLK1(2)    --------->ANAC58                 --------------->AtSPL8<---------At5g28300<---------MYB52(2) >ARR10   XXXXXXXXXXXXXXXXXXXX>MIR3440B-5P --------->ANAC46 --------->RAP2.3(1)------->PIF4--------->ANAC58   tgttagtagcttcccaggccaatccacctctgtaactgatactccaaaccagtaccataatcgccgctattaccgccagcgcgtgcgccacaaacgtcac  13055500     <---------ANAC46 --->NtERF2             <---------ARR11(1) -------->DEAR3(1)      <---------ARR14(2) ----->ANAC46           --------->ARR14(2) ----->DEAR3(1)         <---------ARR11(3) ---->MYB46(3)          --------->ARR11(3) ---TGA1    <---------LBD16 ---HVH21 <-----------GT1             ------>ZmHOX2a(1)                 <-----------GT1 ----ATERF1(1)         <---------CCA1(2)                         <---------MYB52(1) ----At5g28300--------->LBD16<----------DOF2        <----------DOF2  <-----------GT1 ----->DREB2C(2)--------->SPL7      ----------->RAV1(2)       ---------->ID1                --------- =======================================bZIP_DOF    xxxxxxxxxxxxxxxx>smallRNA(i)        <----------DOF2   cgccatcgcgtttatccggacagccatatctctttctctcctgcaactgtgtttctttcttcttgtcgttttttctactcttctaatctcctttgtccga  13055600                                                                                                  <--                                                                                               <-----                                                                                           <-------PIF5                                                                                           ------->MYC4                                                                                           <-------MYC2                                                                                           ------->MYC3                                                                                           <-------MYC3                                                                         --------->TCP15(1)------->MYC2                                          <-----------GT1                --------->ZAT18   ------->PIF5                                         <-----------GT1                 <---------ZAT18  <---------TGA1a                                      --------->ARR11(3)                 --------->TCP16(1)<-------MYC4                                      <---------ARR11(3)                 --------->PCF5   <---------O2                                      <---------GLK1(2)                  <---------PCF2   --------->O2                                  ------>ZmHOX2a(1)                     <---------TCP23   <---------ANAC55(2)                                 --------->TOE2(3)                    --------->ALFIN1    --------->TGA1a                                *TSS  --------->ARR14(2)     --------->YAB1               <<<<<<<<<<HY5                --------->At4g35610   <---------ARR14(2)    <---------ATHB12           --------------                <---------At4g35610 ----------->ARR10   ------------>CBF----------->TCP11(1)---------             ------>NtERF2 <---------ATHB12          ===============================================bZIP_DOF ->ID1     --------->TOE1(1) --------->WOX13(1)      <----------DOF2<-----------RAV1(1)<---------ARR14(2)   ttaatcttcaacctcggcctctgagacgaatcaatcctcagattttccatttcttcttttcaataatccactgtgggcccttcttcgcagacacgtgggc  13055700                                                                                  --------->ARR11(3)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                              ------->MYC2                                                                              <-------PIF5                                                                              <-------MYC2                                                                              <-------MYC4                                                                              ------->MYC3                                                                              ------->PIF5                                        <---------LBD16                       ------->MYC4                                       <---------ANAC58                       <-------MYC3                               ----------->GT1                               <---------O2                             <---------ANAC58                                --------->O2                             <---------ANAC55(1)                             --------->TGA1a                             <---------ANAC46       --------->HSFB2a(2)      <---------TGA1a                             --------->O2           <---------HSFB2a(2)      --------->PIF3(3)    <------ZmHOX2a(2)        <---------ANAC58    --------->ARR14(2)          <---------PIF3(3)   --------->ARR14(2)        <---------TGA1a     <---------ARR14(2)          <<<<<<<<<<HY5        --- ----NtERF2                  <---------O2--------->ALFIN1                    <---------ANAC46   <---- ----PCF2                    --------->TGA1a<---------PCF2                  ------>NtERF2    <------- -->PIF3(2)        <<<<<<<<<GATA-1     <---------ANAC46           <---------TOE2(3)          -------- >ALFIN1          <-----------GT1      <---------ANAC58     <----------ID1 <---------ALFIN1  --------   ctcacgatccattttcgatttatctattcagacgtgtaatttcgtggggcagttctcgataaacgactaatgtttcgccacgtggatattgtagtagctg  13055800                                                  ------>MYB83                                                  ------>MYB46(1)                                                ------->GAMYB                                                --------->AtMYB61                                                <---------MYB59                                               --------->MYB46(3)                                              ------>MYB46(1)                                              -------->P ---------->DOF2                                              ------>MYB83                       <---------ANAC46      --------->MYB55(1)                       <---------ANAC58     --------->MYB46(3)                       <---------ANAC58     <---------MYB46(2)                    <----------DOF2                     <----------DOF2        <---------MYB111(1)                  ------>ZmHOX2a(2)                 <---------ZAT18            <---------MYB55(2)                 <---------AGP1                 --------->LBD16            --------->DEAR3(1)                 --------->ARR11(3)       --------->ARR14(2)                   <---------MYB111(2)                <---------ARR14(2) ---->TEIL <---------At4g35610              --------->AtMYB61                  --------->ARR14(2) ---TEIL   --------->At4g35610             --------->MYB46(3)                  <---------ARR11(3) --At4g35610    <---------ANAC58          --------->ANAC46              <---------ZAT14 ->ZAT2<---------ARR14(2)                --------->AtMYB61              --------->ZAT18 ->At4g35610    <---------ANAC58        --------->MYB46(3)    --------->LBD16 <---------CCA1(2)   ---   catctactagttccgcttccgcgcttcgtgtctgtttcttctaccaccaaccaaaccattaaaccgcgatagagcatactggatcttttttaaggcccat  13055900                   -------->P                   ------>MYB46(1)                   ------>MYB83                 <---------MYB111(1)                 --------->MYB46(3)                       <---------ANAC58          <-------GAMYB    --------->ANAC55(2)            <---------ANAC58         <-----------RAV1(1)                        <---------YAB1  <---------LBD16  <-------TEIL   <---------MYB59                  <---------bZIP60(1)    --------->GLK1(1)  ------->TEIL   --------->AtMYB61                --------->bZIP60(1)    <---------GLK1(1) ------------>AtSPL8       <---------ANAC55(2) <---------YAB1 ---------->ID1   ----------->HVH21   tatgtacatttctgttggaccaacccattgcgcaatggaaactattcatatgatatcatttcttgtcgttttcggatttcagtgactgtgttatgctgtt  13056000                                                                                     --------->ICU4                                                                                   ---------->DOF2                                                                             <---------HSFB2a(2)                                                                             --------->HSFB2a(2)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                       <-----------ARR10             --------->ANAC58                                        --------->HSFB2a(1)             --------->ANAC58                                        <---------MYB46(3)            --------->RAP2.6(3)                                      --------->HSFC1(2)           --------->MYB52(1)                                        <---------HSFC1(2)        ------>ZmHOX2a(2)                                            <---------DEAR3(2)     --------->YAB1                   <---------ZAT18               <---------DEAR3(1)              -     --------->ATHB12                 --------->ZAT18    ----------->GT1     <---------LBD16        -    <---------ATHB12 <---------MYB46(3)            ---------->DOF2------------>AtMYB77             --   tttccaatgatcgaaacggcatgttgttggaatgggctagtgggctaacttgtgaaagaaggtaacatcgacggttcttctcggataaagattaggctga  13056100  Previous    Next  AGI:  At4g25570.1    Description:  ACYB-2 (Arabidopsis cytochrome b561 -2); carbon-monoxide oxygenase. similar to ACYB-1 (Arabidopsis cytochrome b561 -1), carbon-monoxide oxygenase [Arabidopsis thaliana] (TAIR:AT5G38630.1); similar to unknown [Populus trichocarpa] (GB:ABK93740.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Cytochrome b561; (InterPro:IPR004877) Range:  from: 13053695    to: 13055632    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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