Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <------NtERF2                                                                --------->RAP2.6(2)                                                              --------->At4g35610                                                              <---------At4g35610                                                           --------->ZAT2                                     --------->AtLEC2      --------->At4g35610                                 ------------>CBF       --------->ZAT2                            ------>ZmHOX2a(2)           <---------At4g35610                           <---------GLK1(1)            --------->At4g35610                           --------->GLK1(1)           ----------->RAV1(1)         ------------>CBF <---------ARR11(3)         --------->At4g35610         <------ZmHOX2a(2)--------->ARR11(3)         <---------At4g35610            <---------ZAT2         ==============================HOX2a_HOX2a   <---------ZAT2         <<<<<<<ZML2   ----------->RAV1(2)    --------->ARR14(2)         --------->ZAT2      --------->HSFB2a(2)   <---------ANAC46       ------->TEIL             ---------->CDC5   <---------MYB111(1)  ------>MYB83            <---------ARR14(2)   -------->P  <---------At4g35610     --------->ANAC58  ------>MYB46(1)         <---------AGP1----------->RAV1(1)<---------ZAT2<---------HSFB2a(2)    <---- --------->RAV1(2)     <---------WOX13(1) <---------ALFIN1----------->RAV1(1)      --------->ANAC58 --------GT1 <---------ATHB12   ------>ZmHOX2a(1)--------->TOE2(3)   --------->MYB46(3) <------ZmHOX2a(1)   aacctgcctggatcaatggttcttgatggatctccttcaatgcaacacttacctcagcagcagcagcggcaactactagaacagcaagcaggacaaggtt  13028400                                                                                              -------                                                                                       <-----------GT1                                                                                   --------->ARR11(3)                                                                                   <---------GLK1(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR11(3)                                                                                   <---------ARR14(2)                                                                               --------->At4g35610                                                                               <---------At4g35610                   <---------MYB52(1)                                         ----------->RAV1(1)                 ----------->GT1                                            --------->At4g35610     -              ------------>MYB.PH3(1)                                       <---------At4g35610     =      <---------ATHB12                      <---------TOE2(3)        <-----------RAV1(1)<---------At5g28300  ----------------->AGL1            --------->ANAC58     --------->ANAC58   <---------ZAT2    <------ ---TEIL ----------->GT1            --------->ANAC58     --------->ANAC58   --------->ZAT2 <---------At4g35610   cagttccaatgagggaaaacagttattcccatgtagataagaaactgagattagaagtgaagcaagaagacttgttgcagcagcagattttacagcagtt  13028500                         <---------GLK1(1)                         --------->GLK1(1)                 --------->ANAC46                <---------LBD16               --------->MYB52(1)         <----------DOF2            --------->ANAC58        <-------TEIL      <---------ZAT2            --------->ANAC58  <---------At4g35610     <---------At4g35610            --------->PCF2<---------ARR14(2)          --------->ZAT2          <------ZmHOX2a(1)   --------->LBD16      <---------At4g35610                       <-------       <-----------RAV1(2)--------->ARR14(2)  <---------ANAC58                 <---------GLK1(2)     ------>NtERF2    --------->ANAC58 --------->ANAC58                       <---------At4g35610    --------->DEAR3(1)--------->ANAC58 --------->ANAC58             ----------->RAV1(1)     --------- -->At4g35610  <---------ALFIN1  <---------At4g35610  --------->At4g35610  <---------At4g35610 ----->ZmHOX2a(2)--------->O2 --------->At4g35610  --------->At4g35610--------->REM1(1)     --------- ================HOX2a_HOX2a<---------LBD16   <---------ANAC58--------->ALFIN1--------->At4g35610 ---At4g35610 ----------->HVH21  --------->At4g35610 ----------->RAV1(1)   --------->At4g35610 <-----   gatccagcgccaggaccccacgggaagaaatccgcagatgcaagctttgcttcagcagcagagagtgaggcaacatcagcagatgcttcaatccatgtca  13028600                                         <---------ZAT14                                         <---------At4g35610          <---------GLK1(1)                                        ------------>AtMYB77    ----------->RAV1(1)                                --------->ZAT2                  ------>MYB83                                <---------ZAT2                  ------>MYB46(1)                                ----------->RAV1(2)             --------->MYB52(1)                                --------->At4g35610           --------->MYB46(3)                                ================================RAV   --------->GLK1(1)                                <---------At4g35610          --------->ANAC58                              <-----------RAV1(2)            --------->ANAC58                             --------->At4g35610         <---------MYB52(2)                             <---------At4g35610        --------->ANAC58                 ------>ZmHOX2a(1) ----HVH21                  ================RAV         --------->ANAC46           <-------TEIL >ANAC46                    ----------->RAV1(1)         --------->ANAC58           ------->TEIL >bZIP60(2)               <---------At4g35610       ----------->RAV1(1)      ------>ZmHOX2a(1)      < ------GT1                --------->At4g35610  <---------At5g28300   <---------GLK1(2)   --------->ICU4   ccctctcagagactccaacttcagaaacagcagcagctgagacagcagttacagcaacaaggaacccaacagatttctcctaatgtacgtccttatgaag  13028700          <---------LBD16                            <---------ZAT2        --------->ZAT2                               --------->ZAT2        <---------ZAT2                               --------->At4g35610        <---------ZAT14                         ------->GAMYB        --------->ZAT14                    <---------At4g35610    <---------DEAR3(1)               --------->At4g35610   <------NtERF2                     <---------At4g35610    <---------At4g35610 <---------ANAC58               <---------CCA1(2)    <---------At4g35610--------->TOE2(2) <---------RAP2.6(2)       ------->TEIL --------->At4g35610--------->ANAC58 <---------ANAC58      --------------->AtSPL8  --------->MYB46(3)     -------->P <---------ANAC46      <---------------AtSPL8--------->MYB52(1)  --------->ZAT6             <-------- ------NtERF2       <---------TOE2(3)----------->RAV1(2)   --------->ANAC58   ------->TEIL <---------AHL20(2)   ttggcgtctgtgctcggaaattgatgatgtacttgtatcatctgcagcaacggcctgctgtaagctaatactaacctatggacttctagttattttatca  13028800                                                     --------->ATHB12                                                    <---------------AGL15                                                    --------------->AGL15                                          *TSS     <---------ANAC55(2)                              <                 <---------ATHB12     <------ZmHOX2a(1)            <-----------RAV1(1)       --------         --------->ARR11(3) <----------DOF2        --------->ANAC55(2)                   ------->PIF5 ---GT1  <---------ARR11(3)<---------DAG2 <------------CBF   <------ZmHOX2a(1)           <-------PIF5   catctattcaagttctcccatcactgataccttttctgtaggaaaattgcattacttattggaggaaatttgtggcagaatactttcacctcgtgcaaag  13028900                                                                     <-----------HVH21                                                                     <---------MYB52(1)                                                                    --------->LBD16                                                                  <---------LBD16                                                                --------->ARR14(2)                                                                <---------ARR14(2)                      ---------->DOF2                          <---------At4g35610                    --------->ANAC58                           --------->ATERF1(1)               --------->ZAT6                                  <------NtERF2             <-----------GT1    <---------ZAT18                --------->ZAT2           <-----------HVH21--------->ALFIN1                  <---------ATERF1(1)        <---------ANAC58  --------->ALFIN1                 --------->ANAC46      <---------YAB1--------->ANAC58<---------ALFIN1       --------->ANAC58<---------ARR14(2)   --------->ALFIN1--------->SPL7  <------NtERF2           --------->ANAC58--------->ARR14(2) ---------AtMYB61<---------SPL7 --------->ZAT18<---------ANAC58--------->At4g35610      <---------ANAC46 -->DOF2<---------ANAC58  <-----------RAV1(1)  <---------ANAC58<---------ZAT2    <----------DOF2 <---   cagaggttgtgcttgtcacagtacgaaagtgttgggcaccatgcccttggcatgtttccacaggcagctccggtcagtatcgtctttgctctgtgtgttt  13029000                                             --------->ANAC46                                   <----------DOF2           <---------ARR11(3)   <---------ARR11(3)           --------->ARR11(3)   <---------ARR14(2)          --------->GLK1(1)     --------->ARR11(3)                                  --------->ZAT14          <---------GLK1(1)    <---------GLK1(1)            ----------->RAV1(2)     <---------ZAT14        --------->YAB1         --------->GLK1(1)          <---------ALFIN1        --------->ANAC46       <---------YAB1          <---------ARR14(1)      --------->ANAC46         <-----------GT1   <--    <---------MYB52(1)         <---------CCA1(2)     <-----------GT1        ------->TEIL        <----   <-------GAMYB <---------ZAT14<---------ARR11(1) <----------DOF2       <---------YAB1        <----- ------AtMYB61   --------->ZAT14--------->ARR14(2)<---------ICU4     ----------------------->TaNAC69(2)   tggtctgttatgatatctgtgttctgcatcagcatatctttagctatacacatctttactccacctgtactatttatgaatttcacttcactgatttttt  13029100                                                           <------NtERF2                                                          --------->LBD16                                                          <---------RAP2.3(1)                                      <-----------RAV1(1)--------->ANAC46                                    <---------GLK1(1)    <---------RAP2.6(2)                                    --------->GLK1(1)    <---------RAP2.3(2)                                    --------->CCA1(2)   --------->RAP2.6(3)       ----------->GT1                                   --------->ARR14(2)   <---------LBD16           <------MYB46(1)                                   <---------ARR14(2)<----------DOF2              <------MYB83                         <---------------AGL15      <---------ICU4               --------->MYB59        <-------TEIL     <---------YAB1             ------>ZmHOX2a(2)         --------->ARR14(2)   <XXXXXXXXXXXXXXXXXXXXMIR417    <------ZmHOX2a(1)<---------YAB1             <---------ARR14(2) -------TOE2(3)          --------------->AGL15    <---------ARR11(3) --------->HSFB2a(2)            - -----AHL20(2)          <-----------------AGL2    --------->ARR11(3) <---------HSFB2a(2)  --------->MYB52(2) ----AHL20(2)      <---------YAB1 =========================HOX2a_HOX2a  ---------->DOF2 --------->ARR11(3)   aatgaataagttcatcatcttctcattctgtttataggatatgtggcagtgtgatctttgcggcactaagtctggaaagggatttggtaagatagttgca  13029200                                                          <-------MYC3                                                          ------->MYC3                                                          ------->MYC2            <---------ANAC46                              <-------MYC2            <---------ANAC58                      --------->ZAT2            <---------ANAC58                   <---------At4g35610          <-----------GT1       <---------ANAC58  --------->At4g35610  <---------ANAC58              <---------ANAC58  <---------At4g35610      <----------DOF2         --  <---------ANAC58          <----------DOF2 ---------->DOF2      <---------WOX13(1)          -------- -------->ARR11(3)   --------------->AtSPL8<---------ATHB12   <---------YAB1<---------YAB1  <--------   aatttcttgtttttacttgtatttctgtgcctttacttgagcacaatgaagcagcttacacatgctaattgctctctctttattgtttaaaactttgata  13029300  Previous    Next  AGI:  At4g25515.1    Description:  SLK3 (SEUSS-LIKE 3); transcription regulator. similar to SLK1 (SEUSS-LIKE 1), transcription regulator [Arabidopsis thaliana] (TAIR:AT4G25520.1); similar to SEU1 protein [Antirrhinum majus] (GB:CAF18247.1) Range:  from: 13028842    to: 13031808    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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