Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->TOE2(3)                         --------->ANAC58                         --------->ANAC46                         --------->ANAC58                         <---------ANAC55(2)                         --------->ANAC55(1)              <---------ANAC46              <---------ANAC58             <---------------------WRI1              <---------ANAC58      <---------ARR11(3)                                              -              <---------AtLEC2  --------->TOE2(3)                                                   -      ------->TEIL       --------->ANAC55(2)                   <---------MYB46(3)            <-------     <---------AtLEC2   <-------TEIL--------->ARR11(3)    --------->AHL20(2)                 <-------    <-------TEIL----------->GT1--------->YAB1             <---------AHL20(2)            --------->YAB1   ctaaaatgcatgtattgcatgtaaaatacgtaaacataaatcttgagcgaattgaactaaaaaattggttgaaatttgaaactgagcaaataatagcgag  12998000                                                                                                -----                                                                                                <----                                                                                                -----     --------->ANAC58                                      --------->At5g28300                  <----     --------->ANAC58         --------->ARR14(2)          ----------->GT1               --------->YAB1 -------->ANAC58              <---------ARR14(2)        <---------ZAT2             <---------YAB1 -------->ANAC58           --------->ANAC58             --------->ZAT2     <---------MYB52(2)  <----- --ANAC58           ---------->DOF2             <-------MYC3          --------->ANAC46 <-------TEIL --ANAC58 ------>ZmHOX2a(1)--------->ANAC58     ------->MYC3    <----------DOF2<---------MYB52(2)----   acaagacaagtcctagtaaatgcaaagacatggaacctctgcattaaacatgtggccaagctgtaactttctaagctactaactcacgattcataagaat  12998100           --------->YAB1    --------------->AGL15    <---------HSFB2a(2)    --------->HSFB2a(2)                                                                             -    <---------------AGL15                                                                           < ---->HSFB2a(1)                         --------->TOE2(3)                                          <- -----HSFB2a(1)                         --------->TOE1(3)                                          -- ---->KAN4(1)                --------->GLK1(2)--------->ARR11(3)                                 <--- -----KAN4(1)                --------->ARR11(3)                                                  <--- ----KAN4(2)                 <-----------ARR10<---------ARR11(3)                                 <--- ----->KAN4(2)               <---------ARR11(3)               ---------->DOF2         ---------->DOF2   attcttctagtaattgtaatccccaagagaaaatctagacaaccttaagttctctcttaatttgtaaagttcaaaaacttgaaaaccccaaagaaaatgg  12998200         --------->YAB1    <------MYB46(1)    <------MYB83                                                                               <-----  <--------P                                                                           <---------ANAC58 <-------GAMYB                                                                       <-----------GT1 -------->MYB55(2)                                            --------->YAB1         <---------AHL20(2) ---------MYB46(3)                                           <---------YAB1--------->AtLEC2    <----- --------AtMYB61                                            <---------ARR11(3)   <---------AHL20(2) ------->ALFIN1                                  <---------ANAC58  --------->At4g35610 <---------ANAC58 ------ANAC58             <---------At4g35610    <---------ANAC58  <---------At4g35610 <---------ANAC46 ------ANAC58             --------->ZAT2         <---------ANAC46<---------ICU4  --------->AHL20(2) ------ANAC46 ----------->GT1          ---------->DOF2      --------->ARR11(3)------->TEIL     ------   tgtggttggaatcatactgtaatactcaagctgtctgttttcaaagaaaatgcgtggctaaatatcatcatctcaccatgcatttatttacttgtagtac  12998300                        --------->ANAC55(2)                        <---------ANAC55(2)                <-----------GT1               <---------YAB1             --------->YAB1             -------->HAHB4             -------->ATHB1             --------->ATHB51                     ------>MYB83             <---------ICU4                       ------>MYB46(1)             <--------HAHB4                     --------->AtMYB61                                   -         --------->AHL20(2)                     --------->DEAR3(1)                                  <         <---------AHL20(2)                     <---------ALFIN1                                 <---     <----------DOF2<-----------HVH21          --------->MYB46(3)<---------YAB1               -------  <-----------GT1<---------At5g28300       <-----------HVH21     ------------>CBF   --------->DAG2  - ----ZAT14  <---------ATHB51       --------->AHL20(2)   --------->At4g35610        ---------->DOF2  < ----ZAT18  --------->ICU4         <---------AHL20(2)   --------->ZAT2 *TSS    <---------ZAT6 ------- --->ZAT14  <---------YAB1        <---------AHL20(2)    <---------ZAT2------------>CBF       --------   agtttatctttttaattattactgtcacgttttaaaattattttctgtcaccaccctctgctcgattatcaatgcaatatagagataaagttgcagtgct  12998400       <---------MYB52(1) -------->ZAT2                                                <---------ANAC46 ---------ZAT2                                                <---------ANAC58 ------At4g35610                                       <----------DOF2       --------->ARR11(3) -->ZAT14                                             <---------ANAC58       <---------ARR11(3) -------->At4g35610      <------ZmHOX2a(1)            <---------ANAC58       <---------GLK1(2) ---------At4g35610   <-----------RAV1(2)            ---------->ID1      ---------->DOF2 -->At4g35610       <-----------HVH21  <---------AHL20(2)     <---------ANAC58 ->ALFIN1       <---------LBD16       --------->AHL20(2)    <-----------RAV1(1)                   <--   gcagcttccgatagctctctcgggtcaggaaccaaaaacataaaatttcaaatttggcttttttgctggtgcaaaaaaagattttgttcttcaacctctt  12998500                                                                        <---------------AGL15                                                                       ==============================                                                                       <-----------------AG                                                                       <-----------------AGL1                                                --------->TOE2(3)     --------->MYB52(1)                       <-----------GT1    <---------YAB1          --------------->AGL15   -----------         <-----------HVH21    <---------ALFIN1 --------->ANAC46   <---------------AGL15  <-----------     <----------DOF2  ---------->ID1     --------->AHL20(2)       =================================== --------DOF2        <-----------GT1   --------->ICU4        <----------DOF2             --------->ALFIN1   ctttcttcttttgtcagtccatttttcgccttccacttgtcaatattatacgttagagacaggcttttctcttaacagaaatgggaagagagtggtacaa  12998600                  <---------------AGL15                  --------------->AGL15         <---------ALFIN1       --------->CCA1(2)       ===================HOX2a_HOX2a                           <---------ZAT18       <------ZmHOX2a(2)                                        <---------ZAT14      <---------ARR14(2)                                        --------->ZAT14      <---------ARR11(3)     --------->ANAC58             <-----------TGA1      --------->ARR11(3)     --------->ANAC58            --------->bZIP60(2)      --------->ARR14(2) --------->ANAC46                <---------ANAC58       <-----------GT1    ----------->ARR10    --------->ANAC58               <------NtERF2 <-----------GT1               =  <------ZmHOX2a(1)------>ZmHOX2a(1)                  <---------RAP2.3(3)   <----------DOF2         < =================================MADS_MADS      --------->MYB52(1) <----------DOF2              <--- >GT1 --------->AGP1     --------->ANAC58     <---------At4g35610   <---------DAG2      <-----------GT1 ------------TaNAC69(2)---------->DOF2    <---------ATHB12<-----------HVH21 <---------DAG2    <------ =================================MADS_MADS  ------->TEIL<---------ANAC58   =========================   tggaggaagatccacttgttcctctaaaagcaagaaaaactccaatgaagctaatggctgcgtcactgcactttaccacttttttcatttccaccatttt  12998700                  --------->YAB1                  <---------ICU4                 <---------YAB1               <---------ICU4              --------->ICU4           --------->TGA2(2)          <-----------TGA1         --------->ANAC55(2)         <---------bZIP60(1)         --------->bZIP60(2)         --------->ANAC58         --------->ANAC46  --------->DEAR3(1)         --------->O2      <---------MYB111(2)         --------->ANAC55(1)          --------->ICU4         =============================MYC_MYB                      <---------ANAC55(2)         --------->TGA1a   --------->AtMYB61                       --------->ANAC55(2)         <---------O2      <---------MYB55(2)                      <---------ANAC58         <---------TGA1a   <---------ALFIN1                        <---------ANAC58         --------->ANAC58  <---------MYB46(2)                      <---------ANAC46         --------->bZIP60(1) -------->P <---------GLK1(2)     <---------------AtSPL3         <---------ANAC55(2) ------>MYB83                     --------------->AtSPL3     <-----------HVH21 --------->MYB46(3)  <-----------GT1    <---------------AtSPL8 ==================bZIP_DOF<---------MYB111(1)                <---------TOE2(3) ----------DOF2--------->YAB1------>MYB46(1)                ---------->DOF2                      <--- --------GT1  <---------YAB1--------->MYB55(1)     --------->LBD16<-------TEIL                ------- ---ICU4<-----------STF1  --------->MYB46(3)      --------->HSFB2a(2)                        -------- ==================bZIP_DOF--------->MYB46(3)     <---------HSFB2a(2)      --------->ZAT6  >>>>>>>>>GATA-1   tactttccttcacgtcatcatcatcaccaccaacctagtattgattctccctccagaactcgtaaaggtacgtgctatctctatctctctatagataaag  12998800                                                                      --------->ANAC58                                                                      --------->bZIP60(2)                                                                      --------->ANAC46                                                                      --------->ANAC58                                                                     ------>NtERF2                                                                   --------->ATERF1(1)                                                                   <------NtERF2                                                                  ------>NtERF2                                                                  <---------RAP2.3(1)                                                                 --------->bZIP60(1)                                                                 --------->PCF2                                                                 <---------bZIP60(1)                                                                 <---------PCF2                                                                <------NtERF2                                                                --------->RAP2.3(1)                                                                --------->ATERF1(1)                                                               <---------ATERF1(1)                                                               <---------ERF1                                                               <---------RAP2.3(1)                                                              <---------RAP2.3(3)                --------->ANAC46                              <---------DEAR3(1)                --------->ANAC58                            <------MYB46(1)                --------->ANAC58                            <------MYB83      <---------At4g35610                                  --------->ALFIN1 ---ZmHOX2a(1)<---------AtLEC2                             <---------AtMYB61                  <------ZmHOX2a(1) -->DAG2<---------DAG2                <---------YAB1     <---------ANAC58               <---------YAB1 -->DOF2<----------DOF2       <------ZmHOX2a(1)          <---------ANAC58    --------->ZAT2--------->At4g35610   gacttgggagctttttgcaagacagtgagtgaggaatgttatgctactgaaacttgtaggcttggtggcgccacgaaacagcttggacttatcagaggag  12998900  Previous    Next  AGI:  At4g25430.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17701.1) Range:  from: 12998371    to: 13000221    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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