Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------ARR14(2)                                                                      --------->ARR14(2)                                       ---------->DOF2                <---------ARR11(3)                                   ------>ZmHOX2a(2)          --------->ICU4                                  <------ZmHOX2a(2)        <---------YAB1                                 <---------ARR11(3)      ----------->GT1                          --------------->AtSPL8         --------->YAB1       --------->ICU4                          <---------------AtSPL3        <---------YAB1--------->ARR11(1)                          <---------------AtSPL8        ----------->GT1--------->CCA1(2)                      --------->AHL20(2)              --------->YAB1  --------->ARR11(3)              --------->AHL20(2) --------->ARR11(3)   <---------ICU4<---------YAB1                ---          --------->AHL20(2) <-----------GT1    --------->TOE2(3)   ----------->ARR10           <----       --------->YAB1 <---------AHL20(2)        <----------DOF2     <---------TOE2(3)          ------   tgtatacaataagaaaataaacatataaattgtacgatctctaaagaatactttaaaaatgataaatattaagatatggaatgttgaagggaacctatta  12980900                                      <---------ANAC58                                 --------->ATHB12                                --------->TGA2(2)                               <-----------HVH21                               <-----------TGA1                              --------->bZIP60(2)                              <---------TGA2(1)                              --------->bZIP60(1)                         ---------->DOF2                     <---------At4g35610                     --------->At4g35610 -------->P                 <---------REM1(1)    <---------ANAC58               <---------ICU4 <---------bZIP60(1)               -------->HAHB4 <---------O2 --------->TOE2(3)                 <---------ANAC55(2)               --------->YAB1 --------->O2 --------->TOE1(3)                <-------TEIL           --------->AHL20(2) --------->ANAC58                            <---------ARR14(2)           <---------AHL20(2) --------->ANAC46                            --------->ARR14(2) ------->DOF2 <---------ATHB12--------->ANAC58  <---------MYB52(2)        <---------MYB52(1)       <- -----AHL20(2)--------->ICU4 <-----------STF1   --------->MYB46(3)    <-----------GT1   <---------ARR11(3) --->AHL20(2)<---------TOE2(3)--------->TGA2(1)>>>>>>>>>MYB98     <----------DOF2      <---------ATHB12   aaaagagaagaaattaatgatgaagcagaaagacgtcattgcttaccctaacaaacctctctctccatctttttccgatacgtctaccaataacttagta  12981000                                                                         <-----------GT1                             ------>MYB46(1)                 <---------ARR14(2)                             ------>MYB83                    --------->ARR11(3)                           <---------MYB59                   --------->ARR14(2)                        <-----------GT1         <-----------GT1         <-----------GT1                     --------->YAB1      --------->ARR11(3)  <---------ARR11(1)                    <---------YAB1<----------DOF2<-----------GT1<----------DOF2                <-----       <---------MYB52(1)  --------->AtMYB61<----------DOF2  <---------ARR11(3)       <---------YAB1 --------AHL20(2)  --------->AHL20(2)<-----------GT1        <---------CCA1(2)         <---------AHL20(2)   tttttttctcttagtttttaatattataaccaaacccttttactatcttttttccgactcccatatcttttttttttccgactcccatattattcaactt  12981100                                                                         <---------AHL20(2)                                            --------->HSFC1(2)        --------->AHL20(2)                                            ------>ZmHOX2a(2)        <--------HAHB4                                            <---------HSFC1(2)       <---------ICU4                                           <------ZmHOX2a(2)        <---------YAB1                                          <---------ARR11(3)        --------->ICU4                                          <---------ARR14(2)      <---------ICU4 --------->ATHB51                                          --------->ARR14(2)      <--------HAHB4 <---------ICU4                                          --------->ARR11(3)      --------->YAB1 <--------HAHB4                                     <---------ARR11(3)          <---------YAB1 <---------YAB1                                     --------->ARR11(3)        <---------ICU4 --------->YAB1                              --------->ZAT14                 <---------YAB1  <---------ICU4                              <---------ZAT18               <---------ICU4 --------->YAB1                              <---------ZAT14 ------>ZmHOX2a(1)--------->YAB1<---------YAB1                      <---------ARR14(2)  <---------GLK1(2) --------->YAB1<---------YAB1                      --------->ARR14(2)----------->ARR10  <---------YAB1--------->AHL20(2)                     --------->GLK1(1)===============HOX2a_HOX2a --------->ICU4 --------->ICU4                     <---------GLK1(1)<------ZmHOX2a(2)  <---------ICU4 --------->YAB1        ------- -----DOF2----------->HVH21--------->LBD16--------->AGP1 --------->YAB1<---------YAB1     --------->YAB1   tacaacaaatccctgactagagcaaatcccagagcacaagatcagatccttctgtctcatcatcatcatcattattataatcataattacaagaagaatc  12981200                    <-----------GT1               <---------ANAC46              <---------TOE1(3)              <---------TOE2(3)             --------->MYB52(1)         <---------ICU4        <---------AHL20(2)                    --------->LBD16               ------>NtERF2        --------->AHL20(2)                  <---------LBD16   <---------ANAC46        <---------ATHB51     <---------HSFB2a(2)              <---------ANAC58        --------->ICU4       <---------HSFC1(1)               <---------ANAC58           --------->MYB52(1)       --------->AHL20(2)    --------->HSFB2a(2)      ---------->DOF2   <----------ID1  --------->ICU4       <---------AHL20(1)    --------->HSFC1(1)<------ZmHOX2a(1) ----------->GT1      --------->YAB1 -->GLK1(2)  <---------DOF5.7(2)            <-----------RAV1(2) <------NtERF2      ----------->GT1   gttgttcaaaataattaacgtataacgacttctagatgaataattttcaggagaagaaaagaaggcgtagtaaaacgccgagagtttgtaataacgaaga  12981300                                                                    <-----------ARR10                                                     <---------ANAC58     <---------At4g35610                                                     <---------ANAC58     --------->At4g35610                                             --------->ANAC58      <---------CCA1(2)                                        <----------ID1           --------->ANAC46              <-----                       --------->ARR11(3)    --------->ANAC58  --------->ANAC46             <--------                   ---------->DOF2     <------ZmHOX2a(1)      <---------REM1(2)      --------------->AGL15           <---------------AtSPL8  --------->TOE1(2)----------------------->TaNAC69(2) <----------DOF2   aaacatggagaagttagtacataaagaaattgagaaacgaaggagacaagaaatggcttctctctacgcgtctctccgctctcttctccctttagagttc  12981400                          <----------DOF2                         <---------ANAC58                         <---------ANAC58                         <---------ANAC46                                  --------->ZAT18                   <---------YAB1             <<<<<<<<<TBF1                <---------ZAT18              <---------ICU4            ------>ZmHOX2a(1)              --------->DAG2   <-----------HVH21    <------------------------ANAC81          <---------TOE2(3)             <----- --------->LBD16 <-----------GT1   <------------------------ANAC81    ---------->DOF2      ---------- --TEIL    --------->TOE1(3) --------->AHL20(2)                  <---------TOE1(3)       <-----------RAV1(1) -ZAT6     --------->TOE2(3) <---------AHL20(2)    <----------DOF2 <------ZmHOX2a(1)   <----------DOF2   atccaggtcaaaaccctaattactcttgcttttaatttcttcctcttcttcttcttttttttttgttaaggaaaaagtccacaagtatgctttgtcgctt  12981500                                                                          <---------ANAC55(2)                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                          <---------YAB1                                                                          <---------ANAC55(1)                                                                     <---------ICU4                                                                  --------->TOE1(3)                                                                  --------->TOE2(3) <------MYB83                                             <---------ARR11(3)--------->REM1(1)    <------MYB46(1) ----------->GT1    <<<<<<<ZML2        --------->YAB1 --------->WRKY38(1) <---------ANAC58 ----MYB52(1)<-------TEIL           --------->YAB1    --------->WRKY12  <-----------GT1 >ID1      <---------GLK1(2)--------->ZAT6   --------->ARR11(3)<---------ALFIN1--------->ATHB12   agtttgttaaaaagattcactagaactctaacactctatcatcacaatatctcaagttgacctctacaccttaattacgtttgatttggttttgtaggga  12981600                   ----------->HVH21                 <---------At4g35610                 --------->At4g35610              <------ZmHOX2a(2)             <---------ARR14(2)            --------->At4g35610            <---------At4g35610        <-----------TGA1        <-----------HVH21        --------->TOE2(3)       --------->bZIP60(2)                                                                    <------       --------->ANAC46       --------->At5g28300                                     ----------->HVH21    <---------WRKY38(1)      ----------->GT1                   ---------->DOF2      <---------At4g35610    <---------WRKY12 ---------->DOF2                ---------->DOF2                 --------->CCA1(2)   <-------TEIL<-----------RAV1(2)  --------->AHL20(2)       <---------YAB1         --------->At4g35610   aaacgttcaacgtcagatcaggtgaaaggggcagtgaattacatagactatttgcaaaggaatatcaaagacataaattccaagagagatgacctcgtgt  12981700                                                                                    <------NtERF2                                                                                  <---------DEAR3(1)                                                                                  --------->ETT(1)                                                                                 <---------ORA47(1)                                                                                 --------->RAP2.6(3)                                                               <---------YAB1  <------MYB83                                                             <---------ANAC58  <------MYB46(1)                                                             <---------ANAC58 <---------AtMYB61                                                             <---------ANAC46 --------->MYB59                   <------ZmHOX2a(1)                    <---------ICU4        <---------MYB46(3)              <----------DOF2                           --------->YAB1   --------->LBD16    --------->HSFB2a(2)                                <---------ATHB12 <---------ANAC46    <---------HSFB2a(2)     --------->ICU4      --------->GLK1(1)       <---------ANAC58        <---- ---ZAT6   ------->TEIL  --------->ICU4        --------->ARR11(3)       <---------ANAC58  <---------ZAT6   tattgtctggacgaagctttaggagtagtaatgaacaagaatggaatgagatttcgaatcatgtcgtgattcgtccgtgtttggtcggcatagagatagt  12981800  Previous    Next  AGI:  At4g25400.1    Description:  basix helix-loop-helix (bHLH) family protein. similar to basix helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G51780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70067.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 12981305    to: 12982478    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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