Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <-------PIF4                                              <-------MYC2                                              ------->PIF4                                              <-------MYC3                                              ------->MYC3                                              ------->MYC2                                              <-------PIF5                                              ------->MYC4                                              ------->PIF5                                              <-------MYC4                                             --------->ANAC58                                             <---------O2                                             --------->TGA1a                                             <---------TGA1a                                             <---------ANAC55(2)                                           <------------OsbHLH66                                           <---------ALFIN1                                         --------->DEAR3(1)                                        --------->ANAC46                                      <---------ALFIN1                                      --------->DEAR3(1)                                   <---------ALFIN1                                   --------->ANAC46                     ==================================bZIP_DOF                     <----------DOF2  --------->AtMYB61                    ------>ZmHOX2a(2)--------->MYB46(3) ->MYB83           <---------YAB1 --------->MYB46(3) ->MYB46(1) <-------MYC3     <---------ANAC58--------->O2                                       ----- ---MYB59   ------->MYC3     <---------ANAC58--------->ANAC58              --------->ICU4   --------- --------->AGL1   <---------ARR11(3) <---------MYB55(2)                 <-------TEIL     --------->AtMYB61 --------->AG     --------->ARR11(3)------>NtERF2          --------->ARR11(3)           --------->ANAC46   attagacaattccacatggtgatctttgatggcctccccaccaccgcacgtgaatttggaataccttgtttagtttcattatcaaattacacctaaacgc  12977000                                                                   --------->ALFIN1                                                                  ------->PIF5                                                                  <-------MYC2                                      ----------->RAV1(1)         ------->MYC3                                   --------->ANAC55(1)            <-------MYC3                                   --------->AtLEC2               <-------PIF5               <---------AHL20(2)  --------->ANAC55(2)            ------->MYC2              <---------AHL20(2)   --------->ANAC58              <---------O2           --------->AHL20(2)      <---------ANAC55(2)           --------->O2          <---------AHL20(1)       --------->bZIP60(2)           ===================MYC_MYB          --------->AHL20(2)       --------->ANAC58              --------->TGA1a          <---------AHL20(2)       --------->ANAC46              <---------ANAC46       --------->AHL20(2)     --------->ANAC58            --------->ARR11(3)     <---------ARR14(2)       --------->AHL20(1)     --------->ANAC46         --------->AHL20(2)      --------->LBD16      <---------AHL20(2)      --------->ANAC58         <---------AHL20(2)----------->HVH21      --------->AHL20(2)    ---------->DOF2 ===============================MYC_MYB               <---   <---------ICU4     --------->WOX13(1) ----------->RAV1(1)     <---------TGA1a --------->ARR14(2)  --------------->AGL15     ===============================================bZIP_DOF<---------LBD16--- ------>GT1<---------AHL20(2)--------->DAG2 ------->GAMYB<---------CCA1(2) -------->P--------->LBD16 ->DOF2<---------AHL20(2)--------->YAB1 --------->MYB46(3)<---------ARR11(3) <---------LBD16    <----   gttactaattaaattatttattgtctatcaaaaagccacgcaacaacagtctagcatttaaatcttcacgtgggtctaacccggttccggtttcattatc  12977100                                                                    <---------AHL20(1)                                                                    --------->ARR11(3)                                                                 <---------AHL20(2)                                                                 --------->AHL20(1)                                                                 --------->AHL20(2)                                                             --------->AHL20(2)   <---------YAB1                                                            --------->AHL20(2) <---------MYB52(1)  --------->ARR14(2)                                        <---------AHL20(2)<-------GAMYB  <---------ARR14(2)                                  ----------->GT1     <-----------HVH21 ------LBD16                                         ----------->GT1<---------AHL20(2) ------>LBD16                                        <----------ID1 --------->AHL20(1)          <---- -----LBD16                                        --------->MYB52(1) <------------CBF          <----   cgggtatatgttttggcttcgtctgaatttgaatttgagttttctcattcaaaaaacgataaataaataaaatattggtcagttattctttctatggttc  12977200                                                                                                    -                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                                --------->YAB1      -                                                                               <---------ATHB12     <                                                                              ------>MYB46(1)       -                                                                              ------>MYB83          -                                                                             --------->WOX13(1)     -                                                                           --------->MYB46(3)       - -----ANAC58     --------->MYB52(1)                                        ------------>CBF  -------- -----ANAC58  --------->YAB1                     <----------DOF2         <-----------GT1     --------   ttgtttgatatagaaagaataacaggttttggatttgtctgtgtgtttggactttggattagtattcattcggtttaaccaatcaaaattcgcaacctta  12977300                                                                        ----------->RAV1(1)                                                                      --------->LBD16                                                                     --------->ANAC46                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC55(2)                                         <---------AHL20(2)          --------->HSFB2a(2)                                 --------->YAB1                     <---------LBD16                                --------->ICU4                    <---------ARR14(2) -------->ANAC55(2)             <---------ATHB12        <---------AHL20(2) -------->ANAC55(1)         ------------>CBF            --------->AHL20(2) ---------ANAC55(2)         <---------ATHB12           --------->AHL20(1) -------->ANAC58         <---------AHL20(2)            <---------AHL20(2) ---------->GT1         --------->AHL20(2)       ----------->GT1  --------->ARR14(2) -------->ANAC58     --------->ATHB12   --------->AHL20(2)   <-----------GT1              <---------- -------->ANAC46    <---------YAB1      <---------AHL20(2)  <-----------GT1 --------->At4g35610 ->TOE2(3)          <---------ATHB12 --------->WOX13(1)--------->AHL20(2)   <---------At4g35610 ->TOE1(3)          --------->ICU4 ------------>CBF*TSS<---------AHL20(1) --------->MYB46(3)   <-----   acacgttataaaccatgatgtaatgatttaatcaatgatcaattaaatgtatagaaatttattttccatttccgcaacagctcaaaacgttttctctctt  12977400                                                       <---------ARR14(2)                                     ----------->RAV1(1)     ------>ZmHOX2a(1)                                  --------->ANAC58     --------->GLK1(2)                                  --------->ANAC46     <-----------ARR10    --------->ZAT2                                  --------->ANAC58     --------->ARR14(2)   --------->At4g35610                                 --------->DAG2        --------->ARR11(3)   <---------At4g35610 -GT1                           ---------->DOF2        <---------ARR11(3)   <---------ZAT2 -----DOF2             <---------MYB52(2)       <----------DOF2   --------->REM1(2)   ttccgattttagtctaaaaactgaaacaaacacaaaaagcaacaatttgtctttgaaaatctcctctgtgtatggttcagcttcggtttactaaatctct  12977500                                                                                  <------ZmHOX2a(1)                                                                              <------NtERF2                                                                              <---------MYB52(1)                                                                             ------>NtERF2                                                                             <---------RAP2.6(3)                                                                             <---------SPL7                                                                             <-----------HVH21                                                                             <-----------TGA1                                                                            --------->bZIP60(2)                                                                            --------->O2                                                                            <---------bZIP60(1)                                                                            --------->RRTF1(3)                                                                            --------->RAP2.3(2)                                                                            --------->DEAR3(1)                                                                            --------->ATERF1(2)                                                                            --------->RAP2.3(3)                                                                            <---------ATERF1(2)                                                                           --------->RAP2.3(1)                                                                           --------->RRTF1(1)                                                     <---------ARR14(2)    --------->ERF1                                             <------NtERF2                <---------ATERF1(1)                                         ------>NtERF2                   --------->DEAR3(1)           --------->WOX13(1)            --------->LBD16                --------->At4g35610         <------ZmHOX2a(2)       <---------ANAC58    --------->ARR14(2) <---------ABI4(2)   <------NtERF2                <---------MYB46(3)==============HOX2a_HOX2a--------->ORA47(2)  ------>NtERF2                <---------ARR14(2) ------>ZmHOX2a(2)    <---------ATERF1(1)  <---------RAP2.6(3)         <---------MYB52(1)<---------MYB52(1)   <---------At4g35610  <-----------HVH21          --------->LBD16------>NtERF2  <----------DOF2------>NtERF2  <-----------TGA1         <---------LBD16--------->ATERF1(1)        --------->At4g35610 <---------ATERF1(2)     <---------ARR14(2)<---------ARR14(2)        --------->ZAT2 <---------ANAC58  <---------ALFIN1      <---------ATERF1(1)         <---------ZAT2 --------->bZIP60(1)     --------->ARR14(2)--------->ARR14(2)       --------->ANAC46 <---------bZIP60(1) <------NtERF2     <---------LBD16   ------>ZmHOX2a(1)<---------ZAT18 <---------ANAC58 <------NtERF2--------->ARR14(2)<------ZmHOX2a(2) <-----------RAV1(2) --------->RAP2.6(2)------>NtERF2<---------ANAC58===============HOX2a_HOX2a<------NtERF2   atgccgtcacgatcaatctcggcaccggttccggttcttgctccggctccgatcgtttcctctttagtcccagcagcgccgtcaggacatcagaataaga  12977600                                          <---------MYB52(1)                                         <---------DEAR3(2)                                       --------->DEAR4(2)                                       --------->ATERF1(1)                                      <---------ERF1                                      <---------RRTF1(1)                                      <---------RAP2.6(1)                                      <---------ATERF1(1)                                      <---------RAP2.3(1)                                      ------>NtERF2                                     --------->DEAR3(1)                                    <---------ABI4(2)                                    <------NtERF2                                    --------->RAP2.3(1)                                    --------->RAP2.6(1)                                    --------->RRTF1(1)                                    --------->DEAR4(2)                                    --------->ATERF1(1)                                    --------->ERF1                                   ------>NtERF2                                   <---------ATERF1(1)                                   <---------ORA47(2)                                   <---------RAP2.3(1)                                  --------->ATERF1(2)                                  <---------RAP2.3(3)                                  <---------ATERF1(2)                                  --------->DEAR3(1)                                  <---------DEAR3(1)                                  <---------RAP2.3(2)                                 --------->DEAR3(2)                                 <------NtERF2                                 --------->ATERF1(1)                   <---------ANAC58<---------ERF1                   <---------ANAC58<---------DEAR4(2)                   --------->MYB52(2)<---------DEAR3(1)            <-----------GT1      --------->RAP2.3(1)                                              <--      --------->HSFB2a(1)       <---------ATERF1(1)                                          <-------     --------->GLK1(2)     <---------ANAC46                                                 <--------     ------->TEIL<---------MYB52(1)--------->LBD16                                          ---------     --------->ARR14(2)    <---------ANAC58                                                <------NtERF2     <---------ARR14(2)    <---------ANAC58                                               --------->LBD16     <---------ARR11(1)   <------NtERF2<------NtERF2   --------->YAB1                    --------->RAP2.6(2)     <-----------ARR10   <---------MYB46(3)        <----------DOF2                      <---------LBD16    <---------ARR14(1)   --------->MYB55(2)<---------ARR14(2)                          --------->At4g35610    <---------CCA1(2)   <---------RAP2.6(2)--------->ARR14(2)        <---------MYB52(1)<---------At4g35610   caacgcgaatctttccaccgttcgtggtggctggagccggcgccggtttctctcttttcatcactctctccgtctgtttctgtaaattcagccggaaacg  12977700                                                  <-------MYC3                                                  ------->MYC3                                                  ------->PIF5                                                  <-------PIF5                                                  ------->MYC2                                                  <-------MYC2                         <---------ARR14(2)                                                 <---------ANAC55(2)                   --------->ARR14(2)                                                 --------->ANAC58                  <------NtERF2                                                 --------->bZIP60(2)              ------>NtERF2                                                 --------->ANAC58                 --------->MYB52(1)                                                 <---------TGA1a                 <---------ALFIN1                                                 --------->TGA1a                 --------->DEAR3(1)                                                 <---------O2                   <------NtERF2                                                 --------->ANAC55(2)            ----------->HVH21         ------>NtERF2                           --------->O2                  <---------ATERF1(1)         --------->LBD16                       <------------OsbHLH66           ------>NtERF2        <---------DEAR3(1)                     <---------ALFIN1               --------->ANAC58       <---------LBD16                        <------NtERF2                   --------->ANAC46     --------->DEAR3(1)                      ------>NtERF2                    --------->ANAC58-------  <---------ALFIN1                          <---------ETT(2)              <-----------HVH21   <------ -----TEIL   <------NtERF2                  --------->DEAR3(1)     <---------CCA1(2)  <---------MYB52(1) --DOF5.7(2)--------->LBD16               <-----------HVH21--------->YAB1--------->ANAC46 <----------DOF2 -ARR14(2) <---------ANAC46      <---------LBD16------>NtERF2 --------->ARR14(2)--------->ATERF1(1) >ARR14(2)<---------LBD16------>ZmHOX2a(1)<---------ATERF1(1) <---------ARR14(2)<---------ABI4(2)<---   ttcatcacctccggcggaaaacgcttcctcttcgcctcggagaccgtcgccacgtgagttttcatattcgtctctccgtcgcgccaccggttctttctcg  12977800                                                           <---------ANAC46                                                          --------->ATERF1(1)                                                          <------NtERF2                                                         <---------RAP2.3(1)                                                         <---------DEAR4(2)                                                         ------>NtERF2                                                         <---------ERF1                                                         <---------ATERF1(1)                                                        <---------RAP2.3(2)                                        <---------LBD16 <---------RAP2.3(3)                   ------>ZmHOX2a(2)                                       <---------ANAC46 <---------ATERF1(2)                  <-------                                       <---------ANAC58 --------->ATERF1(2)                 ---------                                <---------ANAC58        <---------DEAR3(1)                  <--------                                <---------ANAC58        --------->DEAR3(1)                  <--------                                <---------ANAC46       --------->ATERF1(1)                  ---------                             <---------ANAC58         <---------RAP2.3(1)                   <--------                             <---------ANAC58         <---------ATERF1(1)                   <--------                             <---------ANAC46         ------>NtERF2         <---------TOE1(3)--------                       --------->ARR14(2)             --------->LBD16<---------At4g35610   <---------GLK1(2) -->HSFB2a(2)          <---------ARR14(2)            <---------DEAR3(1)     <---------TOE2(3)<------ZmHOX2a(2) ---HSFB2a(2)<-----------HVH21 <------NtERF2        <---------LBD16 ------->TEIL--------->MYB52(1) --------RAV1(2)      <------NtERF2    <---------ANAC58<---------ABI4(1)   ---------->DOF2 <------ZmHOX2a(1)   caggcgaatagactaggtcagggcggatttggcgtcgtgtttcgtggaactatctccggcggcgagaatgtagctgttaaagtaatggattcaggatctc  12977900  Previous    Next  AGI:  At4g25386.1    Description:  unknown protein Range:  from: 12977014    to: 12977148    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g25390.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G51770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70068.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 12977351    to: 12979578    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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