Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->SPL7                                              <------NtERF2                   <---------YAB1                                              --------->ATERF1(1)        <---------YAB1                                             ------>NtERF2             --------->YAB1               <---------ANAC58             ----------->HVH21          -------->HAHB4               -       <---------ANAC58             <-----------HVH21     <---------ALFIN1  --------->CCA1(2)     --- <---------ANAC58    --------->ANAC58       --------->DEAR3(1)         <---------ICU4             <-- <---------ANAC46    --------->ANAC58       <---------DEAR3(1)        --------->ICU4          <------ <---------ANAC58    --------->ANAC46   --------->At4g35610           <---------ATHB12  <---------ANAC55(2) ->YAB1<---------ANAC58---------->DOF2  <---------At4g35610           <---------YAB1    --------->ANAC55(2) -->HVH21      <---------ANAC58<------ZmHOX2a(1)<---------SPL7   --------->YAB1       <-----------GT1   gtggcttatgcctgctatcgtgcccgaaaggaaggaccagtcagaggcgacggacgactcacacctattgtaatgatgatatgatatatcacctattttc  12969200               <---------AHL20(2)               --------->AHL20(2)              <---------AHL20(2)              --------->AHL20(1)              <---------AHL20(1)              --------->AHL20(2)           --------->AHL20(2)           <--------ATHB1                                                                        ----           <---------AHL20(2)                                                                    ----           <---------ICU4                                                                       <----           --------->ATHB51                                                                  --------          --------->ICU4                                                                    ---------          <---------ATHB12                                                                --------->YAB1        --------->YAB1                                                                   <---------YAB1 <----------DOF2                                                                         --------->ICU4 ----->ZmHOX2a(2)              <----------DOF2                                         --------->YAB1 ------>ARR11(3)      <---------YAB1<---------TOE2(3)                         <-----------GT1<------- -------ARR11(3)   <---------AHL20(2)                              <---------YAB1     <---------AHL20(2) -----GT1 <---------ATHB51     <---------DAG2                    ----------->GT1     --------->AHL20(2)   gatctttttctaataatttattttatgatgcaactttttagattactatatactatagaagagcatattgtaattctattttacctatataataataaat  12969300                                  --------->TOE2(3)                            --------->ALFIN1                            <---------ZAT6 ----->YAB1                 ----------->GT1 ----->AHL20(2)           <---------ANAC58 -----AHL20(2)            <---------ANAC58                                              <-----------HVH21 ->AHL20(2)               <---------ANAC46                                          <---------MYB52(1) >AHL20(2)          <-----------RAV1(1)              ----------->GT1              --------->YAB1 --AHL20(2)       <---------At4g35610      <---------YAB1                     --------->MYB46(3)   aatatttcggcgattttgtcatatgctggagtgttacattagatgatgactagtagggtttttttttttatgtgaaaacaacaatcgttgtgtcatataa  12969400                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC58                                                                    <---------AtMYB61      <---------ANAC55(2)                                                                 <---------AtMYB61    --------->MYB111(1)                                                                 <---------YAB1       ----------->ARR10                                                                 <-----------RAV1(1)  --------->MYB52(2)                                                       --------->ANAC55(2)           <--------P                                                       --------->ANAC58         --------->MYB52(1)                                                       --------->ANAC58      -------->ZAP1 <---------ANAC46                                                       --------->ANAC46    <---------WRKY18(1)                                                       --------->ANAC55(1)--------->WRKY38(1)    <---    ----------->HVH21                                --------->CCA1(2)    --------->WRKY45 ----------  --------->O2                       <-----------GT1--------->ARR14(2)    --------->WRKY12 <---------ANAC58  <---------O2                    ----------->GT1   <---------ARR14(2) <---------ANAC46<---------HSFC1(2)   cgcgaagtgacaaacaaacaattcgaaatattagcaatgttacaaaattcgaaatatacgcaatgttatggtggtgttgaccgaagggtagtttcgtaac  12969500                                                                                      <------ZmHOX2a(1)                                                                                    <---------TOE1(3)                                                                                    <---------TOE2(3)                                                                                 <---------AHL20(2)                                  <------ZmHOX2a(2)                              <xxxxxxxxxxxxxxxxxxx                        ------>NtERF2                                         <---------AHL20(2)                       --------->ANAC46    <------NtERF2                  ----------->GT1 --------->AHL20(1)                     --------->ANAC46    --------->ANAC58 --------->LBD16 -------->HAHB4  --------->AHL20(2)           --------->ALFIN1      <---------ARR11(3)     <------NtERF2     --------->ATHB12<---------AHL20(1)         <---------ANAC46        --------->ARR11(3)     <---------LBD16  --------->ICU4*TSS         <---------ANAC58 --------->DEAR3(1) <----------DOF2             <---------ATHB12 <---------AHL20(2)    <---------ICU4--------->ARR14(2)     --------->ANAC58<---------HSFB2a(2) --------->AHL20(2) -------DOF2      <---------ARR14(2)     --------->ANAC46--------->HSFB2a(2) <---------AHL20(2)  ---- ->GT1   <---------ANAC58<------NtERF2  --------->RAP2.6(3)    >>>>>>>>>TBF1<---------WOX13(1)<------   tttacatcatcgcgtggtcgtatacgcgccgatgagatcacagacggcattaatgggctccggaagaagaaacaaatgattaatttaaggaataaattac  12969600                                                                                               ------                                                                                         <---------ANAC46                                                                                       --------->ZAT14                                                                                  <---------REM1(2)                     --------->LBD16                             --------->AHL20(2)    <---------ZAT14                    --------->HSFB2a(2)               --------->TOE2(3)    <---------ANAC58    <-----     <-------TEIL   <---------HSFB2a(2)             -------->P   <---------AHL20(2)   <-----------RAV1(1) xxsmallRNA(i2)    <---------LBD16     <---------AHL20(2)    <---------AHL20(2)   <---------ZAT14   - ----->ZAT6   <---------ICU4           --------->AHL20(2)    --------->AHL20(2)   --------->ZAT14   < -----GT1    <---------YAB1    --------->AHL20(2)<---------MYB52(2)        <---------ANAC58<---------ANAC46   cactaaattcgtttgattatttccggaaaacaattaactaataaaactataactaacctttgtttaattttttgatttcgcgtcttcactgttgtggatt  12969700                --------->ZAT18              --------->At4g35610              --------->ZAT2           --------------------->WRI1         --------->At4g35610                                                    <<<<<<<<<TBF1         ----------->RAV1(2)                                       --------->GLK1(2)              ---     ------->TEIL                                                 --------->ARR14(2)           <-----     <---------ARR14(2)    ------>MYB83                           <---------ARR14(2)           <-----     --------->ARR14(2)    ------>MYB46(1)                        <---------GLK1(2)           -------    <---------CCA1(2)      -------->P        <------ZmHOX2a(2)  <---------TOE1(2)             ------- --->GLK1(1)  <---------ZAT2                --------->ARR11(3)  <---------TOE2(2)             <------ ----GLK1(1)  <---------At4g35610           <---------ARR11(3)  ----------->ARR10  <<<<<<<<<TBF1----- -------->At4g35610   --------->REM1(1)    --------->YAB1    <---------ANAC46<<<<<<<<<TBF1    <------ ---------At4g35610 <----------DOF2 <----------ID1          <-------TEIL<----------DOF2  <---------MYB52(1)   tcttctgaatcttctgagctcgcttcacctacaagaagacaacaaggatcattttctctaggttcgtagattctctttcttcttcttcttcgtttggatc  12969800                                                                --------->ATHB12                                                                <---------ICU4                                                               <---------ATHB12                                                               <---------YAB1                                                               --------->ICU4                                                          --------->ANAC46                                                          <---------ANAC55(2)                                                          --------->ANAC55(2)                                                          --------->ANAC58 ------>At4g35610                                         --------->ANAC55(1) ----GLK1(1)                                              --------->ANAC58        <XXXXXXXXXXXXXXXXXX ----At4g35610       --------->HSFB2a(2)               --------->ARR14(2)   --------->ARR14(2) -->ARR11(3)         <---------HSFB2a(2)         <---------ARR11(3)         ------->TEIL <-------TEIL -->ARR14(2)       --------->At4g35610           --------->GLK1(2)          --------->GLK1(2) ---ARR14(2)<---------ARR11(3)                   <---------ARR14(2)         <---------ARR14(2)  ----- ->ZmHOX2a(2)  --------->GLK1(2)                 --------->ARR11(3)    <---------At4g35610      ----- ---AGP1    --------->ARR11(3)     ---------->ID1--------->ARR14(2)    --------->At4g35610      <----   tgcttagtgaagaagataatcttctgaaaaattgtttgttttttttctgaaaatctgaatacgtaatgatttgagctgaatctgagttagattcacattt  12969900                                                                                                   <-       <---------GLK1(1)                                                                           --      --------->ARR14(2)                                                                        -----      <---------ARR14(2)                                                                       <-----  <---------LBD16         --------->ATHB12                                                     ------ XXMIR865-5P             <---------AHL20(2)                                      <---------ZAT6<----- ---->YAB1               --------->AHL20(2)                              <---------At4g35610--------- ---->AHL20(2)        --------->ATHB12--------->YAB1 <----------DOF2<---------YAB1          <-------- -----AHL20(2)       <---------YAB1  <------ZmHOX2a(2)      <----------DOF2      <-----------RAV1(1)   atattctggatttgtgctatttgatgatttattagatcgatcatcttgttttcttctttcgcctttaagtatgtttgctcatagtgttgctcttccagat  12970000      ==================================HOX2a_HOX2a      ------>ZmHOX2a(1)    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  --------->ARR11(3)  --------->ARR14(3)  <---------GLK1(2)  <---------ARR14(2)                                                                 <---------AtLEC2  --------->ARR14(2)                                                                 <---------ANAC58  <---------ARR14(3)                                                                 <---------ANAC58  <---------ARR11(3)                                                          --------->ANAC55(2)  --------->AGP1                                              <-------TEIL    <---------ANAC46 --------HSFB2a(2)                                          <---------ARR14(2)<---------ANAC55(2) ------->HSFB2a(2)                                          --------->ARR14(2)<---------ANAC55(1) ---->GLK1(2)                                               <---------GLK1(2) <---------ANAC58 ----ARR14(2)                                          --------->MYB52(1)     <---------ANAC58 --->ARR14(2)      --------->ARR11(3)               --------->ANAC58   <---------ZAT14     ---------- ----GLK1(2)       <---------ARR11(3)               --------->ANAC58   --------->ZAT14     <---------LBD16 >HSFB2a(2)       --------->GLK1(1)                 <---------ANAC55(2)<---------ZAT18 --------->ANAC58 -HSFB2a(2)  ----------->GT1     ------>ZmHOX2a(2)  --------->ANAC55(2)--------->ZAT18 --------->ANAC58   tccagatcctgaagaaggtgaaatcttatctgtgatccagtggaagattgaatcaagtaacagattcacttagttcacttgcgtattgcatgcccctgaa  12970100  Previous    Next  AGI:  At4g25360.1    Description:  similar to YLS7 (yellow-leaf-specific gene 7) [Arabidopsis thaliana] (TAIR:AT5G51640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70095.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 12969587    to: 12972654    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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