AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<-----------GT1 ---------->DOF2 ----------->RAV1(1)
attatgatttgtgatttcacgtttaaattttgttttgttagaaatctatttgataaagtagacgtttatataccaacataatcgtctaggtaattaaatt	1306100
---------->DOF2 <--------HAHB4 -------->HAHB4 ----------->GT1 <--------ATHB1 <-----
agacatccacataacaaaatagcatgttatatatatttttaaaaatcacatattcgataataattaaataaaagttattaaaaaattaaaaatcaatata	1306200
-------->P <-----------ARR10 <-----------GT1 ------GT1 <------ZmHOX2a(2) <-----------HVH21 ------->TEIL ------->GAMYB
ctatttaatggcgatcaaaaacatcattatttgtttttaaatttcatcgtcaaatcttgccatctacctaatttaaccacacaaaaacatcatcaaatta	1306300
< <-----------RAV1(2) ------>NtERF2 < <---------PCF5 <- <---------PCF2 -- --------->ALFIN1 <- <----------DOF2 ---------->DOF2 -- ------>ZmHOX2a(1)<-----------GT1 ---------->DOF2 ==========================
ttcctgtataataccaaattaaactcttttgtccaaaacaatttcaaaaaagaaaactctgtggaataagaaacgggcaaagaggggccagaagtttagc	1306400
-----------TGA1 -----------HVH21 --------TGA1a ------>ZmHOX2a(2) ------->O2 <------ZmHOX2a(2) --------O2 <------------------SPL14 ------->TGA1a ----------->RAV1(1) ----------->RAV1(2) <------------CBF <-- ========bZIP_DOF <---------ALFIN1 <---------ALFIN1 ------------>CBF ------>ZmHOX2a(1)
cacgtcagctacaagagagtgccacatcatcaccataagcctctcccacctgtacggatccctcccaatataaattggaaccaaactctctcctcagaaa	1306500
----------->RAV1(1) ------>NtERF2 <---------ALFIN1 -------- <---------ALFIN1 ------>NtERF2 <----------DOF2 <------NtERF2 ----------->HVH21 <---------PCF5 <-----------GT1 ------>NtERF2 *TSS ------->GAMYB --------->PCF2 <-----------GT1 --------->ABI4(1) ---------GT1 <---------AtLEC2 ----------->HVH21 <-----------GT1 ------>NtERF2
aaaccttctcattacacttgcatgtgcaacgacccgaccctatacccgacccggcccacattttaaacccattttagccttttctgtttccgccgccgac	1306600
<---------ALFIN1 <------NtERF2 <------NtERF2 ---------->DOF2 <-----------ARR10 ----------->TGA1 ------>NtERF2 <------ZmHOX2a(2) ------>ZmHOX2a(2) ------->GAMYB ----------->HVH21 ------>NtERF2 <------ZmHOX2a(2) --->HVH21 <------ZmHOX2a(2) ------->TEIL ------>NtERF2 <------NtERF2 ----------->HVH21
tgatcggaataatcgatcaaagagagaacaactgaatcttcgccggatactacgccgatgacgattgcggcagcgccagcacgccagacagatcgatcag	1306700
<------NtERF2 ------>NtERF2 <---------O2 <---------TGA1a --------->TGA1a --------->O2 <-----------HVH21 <-----------TGA1 --------->O2 <---------O2 <-- <---------TGA1a --------->ALFIN1 ------>NtERF2 --------- --------->TGA1a <------NtERF2 ----------->HVH21 ----------->GT1 <-----------GT1 ----------->HVH21 ------>NtERF2 ================= ----------------------->TaNAC69(2) ------>ZmHOX2a(1) <------ZmHOX2a(1)
ccactggtttcaaccctgcttacgtcacgacggcgaaggcggtgagcgttccggttcaagttcctccggcgactgtggtttccgaaggattaggtaaaga	1306800
=====================HOX2a_HOX2a ------>ZmHOX2a(2) ------>NtERF2 -----TEIL <------ZmHOX2a(1) ->DOF2 <-----------RAV1(2)<------NtERF2 ============================= ============HOX2a_HOX2a ------>NtERF2 ------>NtERF2 <------ZmHOX2a(1) ---
tgcgttgatctcatggttcagaggagaattcgctgcggcaaacgcgataatcgacgcgatgtgctcgcatctaaggatagctgaagaagcggtatctgga	1306900
<------NtERF2 ------->TEIL <------ZmHOX2a(2) ------>ZmHOX2a(2) ====HOX2a_HOX2a ------>NtERF2 ------>NtERF2 <------ZmHOX2a(2) --->ZmHOX2a(2) <------NtERF2 <-----------HVH21 <-------TEIL <---
tcggagtacgaagctgtattcgcggcgatccatcgccgtcgtctgaattggatccctgttcttcagatgcagaagtatcattccatcgctgaagtagcga	1307000

AGI:	At4g02940.1
Description:	oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT2G48080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22468.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123)
Range:	from: 1306503	to: 1310946	Orientation: Forward
Links:	TAIR MIPS

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