Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------ANAC58                                                                                     --------->ALFIN1                               --------->ANAC58                                      <-----------RAV1(1)                               --------->RAP2.6(2)                                 <---------At4g35610                            <---------ARR14(2)                                     <---------ZAT2                            --------->ARR14(2)                                     --------->At4g35610                 <---------At4g35610                                               <------MYB83              --------->DOF5.7(2)                                                  <------MYB46(1)              <---------MYB52(1)     ------->GAMYB                                --------->MYB55(2)             --------->TOE2(3) --------->ANAC58  --------->ANAC58                <-----------RAV1(2)     --------->At4g35610 ------->GAMYB      ------->GAMYB             =======================RAV     ----------->RAV1(2)--------->ANAC58   --------->ANAC58           ----------->RAV1(1) <---------ANAC58   <---------ALFIN1   --------->MYB52(1)   --------->ANAC46         <------NtERF2<---------MYB55(1) --------->HVH21 --------->At4g35610--------->MYB46(3)              ------>NtERF2================RAV ----->ANAC55(2)--------->MYB52(2)  <---------MYB52(2)             <---------ATERF1(1) --------->ALFIN1 -TEIL ----------->HVH21--------->ANAC58   --------->ANAC58---------->DOF2      <---------MYB52(1) ----HVH21   --------->TOE1(3) --------->ANAC46  --------->ANAC58  --------->RAP2.6(2) <---------RAP2.6(2)   catgaccacctgaaacgttagctccaacggaaaccgcaacgaacaacgcaaacgcatgagacaaagacgcggccacaagaccggcaggtgtggctggacc  625700                                                                               <---------At4g35610                                                                               --------->At4g35610                                                                               <---------ZAT2                                        --------->LBD16                     ---------->DOF2                           --------->LBD16                               --------->LBD16                  --------->ANAC58    <---------LBD16                    --------->HSFB2a(2)                  --------->ANAC58 <---------WRKY18(1)                   <---------HSFB2a(2)                  --------->ANAC46----------->HVH21          <---------HSFB2a(2)              --------->HSFB2a(2) --------->WRKY12           --------->HSFB2a(2)  --------->At4g35610              <---------HSFB2a(2) --------->WRKY38(1)    ------->GAMYB   ------>NtERF2       --------->MYB52(2) <---------HSFB2a(2)           --------->MYB46(3)--------->ANAC46     <---------MYB52(1)   --------->HSFB2a(2)         <-----------GT1  <---------LBD16             --   atctccagttagttttccataagccattccagagccttgacccgcgaaaacgaatataaccatcgagaaaaactccgcgaaagctgctctaatcgcatcg  625800                  <---------SPL7                 <---------ANAC58                 <---------ANAC58                                       <---------ANAC58                <------NtERF2                                           <---------ANAC58               --------->LBD16                                      <---------ANAC58               ------>NtERF2                                        <---------ANAC58              <---------DEAR3(1)                                 <----------DOF2              --------->LBD16                  ----------->GT1  <---------ANAC58              --------->ANAC46        --------->ATHB12   <---------AHL20(2)       <---------ANAC58            <-------GAMYB         --------->AHL20(2)       <---------ANAC58   --------->YAB1      <------NtERF2     <---------ANAC58 ------->SPL7<---------LBD16   --------->GLK1(2)        --------->AHL20(2)   ------>ZmHOX2a(1)   ggacgactagcttcccccggcgttccaatcgcaattctgttgataggcatcgttacaaaaaaatttgctttcttgcttcctcttcattttgtttttcatc  625900                                                                                       <---------TOE1(2)                                                                                      --------->STY1(1)                                                                                  --------->ZAT18                                                                                  --------->PCF5                                                                                  --------->TCP15(1)                                                                                  <---------PCF2                                   <---------ANAC46                               --------->TCP16(1)                                 --------->ALFIN1                                ----------->TCP11(1)                        --------->MYB52(2)                                       <---------TCP15(2)                =========================bZIP_DOF                               <---------MYB46(3)            ----------->GT1    --------->O2                                     --------->ABI4(2)       --------->AHL20(2)      <---------O2                                <---------At5g28300       <---------AHL20(2)      <---------TGA1a                            <-----------GT1    ----------->GT1   <---------MYB52(1)  --------->YAB1                <----------DOF2<---------TOE2(2) ========================================bZIP_DOF             <---------TOE2(3)--------->ALFIN1 ---------->DOF2---------->DOF2--------->TGA1a--------->GLK1(2)      <---------ZAT6   <---------STY1(1)   agtaaaagtttaaatagttaaagcgttagtgccaagtgtgtgtatgagaatcgttcaagagactgagattagtgttttacggtgggccctaggttataag  626000                                                          --------->TOE2(3)                                                      <---------AHL20(2)                                                     --------->AHL20(2)                                                 --------->AHL20(1)                                          <-----------GT1 --------->YAB1                       <-----                                        <---------ANAC58--------->ARR11(3)                <----------              <---------YAB1            <---------ANAC58<---------ARR11(3)                -----------            --------->YAB1        <-----------GT1<---------AHL20(1)                ----------->TBP           --------->ICU4     --------->AHL20(2) --------->AHL20(2)                --------->AHL20(2)           <---------YAB1     <---------AHL20(2) <---------AHL20(2)              <---------HSFB2a(2)       --------->At5g28300<---------AHL20(2)    <---------ATHB12                 --------->HSFB2a(2)      ----------->GT1     --------->AHL20(2)------------>CBF                 <----------DOF2<--------    --------->SPL7 <-------TEIL--------->YAB1 --------->WOX13(1)   <---------MYB52(1)    <---------YAB1   --------->MYB52(1)    --------->AHL20(2)-------->P<---------AHL20(2)  ---------->ID1  <-----------   aaatcgaacggtgattataaattcatatttaattaataacttacttaccaattaattaaatcttaatccgtttttctcgctttctataaatactattatg  626100                     <---------ZAT14                     --------->ZAT14                    <----------DOF2                ------->MYC3                                           <---------GLK1(2)                <-------MYC3                                      --------->LBD16    <------------CBF<---------DAG2           <---------DAG2      --------->HSFB2a(2) ------------>CBF *TSS                       <----------DOF2     <---------HSFB2a(2)               <- ----ANAC46     <-------MYC2            <-----------HVH21       <---------LBD16                    -- -----AGL15     ------->MYC2            <-----------TGA1     <----------DOF2                     <--- ---->AGL15    --------->ANAC58     <---------ICU4        <---------ALFIN1                       <--- -YAB1         --------->ANAC46    <---------YAB1       <---------ALFIN1                         <--- ------AGL2    --------->ANAC58  --------->YAB1   <----------DOF2--------->ANAC46           ---------   ggtagcaattgaagaacacgcgctttactgttttctcatcatcgtcacttttctttctccacactttccgcaagattgttctgttcttcaaacgattcta  626200                                                                                            <--------                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     <---------ARR14(2)                                                                                     <---------ARR11(3)                                                                                     --------->ARR14(2)      <----------DOF2                                                                --------->AGP1      <---------DAG2                       <---------ANAC46                          <---------AGP1  --------->ANAC58                         <---------ANAC58                          <-----------ARR10  --------->ANAC58           ------>ZmHOX2a(2)               ------>ZmHOX2a(1)       --------->ARR11(3) <-------TEIL              <---------ARR11(3)      <---------YAB1               ------->GAMYB --------->SPL7       <-------TEIL         <---------ANAC58  ================================HOX2a_HOX2a --------SPL7        --------->ARR11(3)    <---------ANAC55(2)                 --------->ANAC58 ------->TOE1(2)   --------->HSFB2a(1)     <---------ANAC55(1)             --------->MYB46(3) ------TOE1(3)     <---------HSFC1(2)      --------->ANAC55(2)<---------LBD16  --------->ANAC58 ------TOE2(3)    <---------TOE2(3)   <---------MYB46(3)     =================================HOX2a_HOX2a ------------AtSPL8--------->HSFC1(2) <-----------RAV1(1)  ------>ZmHOX2a(2) --------->MYB52(1) >GLK1(2)         <---------TOE1(3)<----------DOF2<---------TOE2(3)     <---------CCA1(2)   ---------   aggtacgacttttttttttgaaggttcttgatctcaacttttgttgcgtattgatgtttgatcctctggattttgtatccaacggaagatctatcgagaa  626300                                                                           <---------TOE2(3)   <-----                                            <---------ARR11(3)          <---------WOX13(1)     ------                                            <---------GLK1(2)         --------->ATHB12         ------                              --------->At4g35610            ------>ZmHOX2a(2)                <------ -HSFB2a(2)                   <---------At4g35610          --------->ARR11(3)     --------------->AtSPL3 >HSFB2a(2)             <---------ZAT6      --------->ARR11(3)       <---------YAB1--------->YAB1   atgaacaaattcgatacaaattgttagtgtttagctgaattatgtagattttgttaacttcgatcttgaagatgattgatgtttatcgtactagtagaat  626400          <----------DOF2       --------->ARR11(3)                           --------->GLK1(2)          <---------YAB1       <---------ARR11(3)                          <---------GLK1(2)      <---------bZIP60(1) ----------->GT1                  --------->At4g35610                <---------O2 ----ARR14(2)                   --------->YAB1   ----------->ARR10   <---------TGA1a --->GLK1(2)            ------>ZmHOX2a(2)   <---------ZAT6           --------->O2                 --- --->ARR14(2)         <---------ARR14(2)  ----------->GT1    --------->ATHB12  --------->AtLEC2  <--- ---GLK1(2)        <---------WOX13(1)     --------->YAB1  --------->YAB1  --------->bZIP60(1)    <---   ctgatgttaaatctttgagtgatggatcgtgttatcagcatcaatagtgaaaagattctatattgatttagacgtgaagtcatgaaaattgactaacaag  626500         <------MYB83                                                       <---------HSFC1(2)         <------MYB46(1)                                                    --------->HSFC1(2)      <---------MYB52(1)                                              --------->At4g35610   <---------TOE2(3)                                                <-----------RAV1(2)   <---------TOE1(3)                                              --------->TOE2(3)             <---- ------>GLK1(2)                   --------->At4g35610         <---------WRKY12                  ----- ------GLK1(2)              --------->AHL20(2)                <---------WRKY38(1)            <------- ------ARR11(3)             <---------AHL20(2)   ----------->GT1  --------->TOE1(3)       --------->ANAC46   attctaacgtttggttctgttttgctctgttttattagatgaatggagaagaagtgaaaacgagtcaacctcagaagaagcttcagaaccctactccacg  626600  Previous    Next  AGI:  At4g01470.1    Description:  GAMMA-TIP3/TIP1;3 (tonoplast intrinsic protein 1;3); water channel. Identical to Aquaporin TIP1-3 (TIP1-3) [Arabidopsis Thaliana] (GB:O82598;GB:A0MF47;GB:Q1PEC5); similar to GAMMA-TIP (Tonoplast intrinsic protein (TIP) gamma), water channel [Arabidopsis thaliana] (TAIR:AT2G36830.1); similar to unknown [Populus trichocarpa] (GB:ABK94058.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 625092    to: 625850    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g01480.1    Description:  ATPPA5 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 5); inorganic diphosphatase/ pyrophosphatase. similar to ATPPA1 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 1), inorganic diphosphatase/ pyrophosphatase [Arabidopsis thaliana] (TAIR:AT1G01050.1); similar to soluble inorganic pyrophosphatase [Populus tremula x Populus tremuloides] (GB:AAD46520.1); contains InterPro domain Inorganic pyrophosphatase; (InterPro:IPR008162) Range:  from: 626118    to: 628055    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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