Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->DEAR3(1)                                                        --------->RAP2.3(2)                                                        --------->RAP2.6(2)                                                       --------->ATERF1(1)                                                      --------->At4g35610                                                      ------>NtERF2                                                      <---------At4g35610                                                   --------->ZAT2                                                   --------->At4g35610                                                   <---------At4g35610                                                   --------->ZAT14                                                ------>NtERF2                                                --------->At4g35610                                               --------->RAP2.3(2)                                               --------->DEAR3(1)                                               <---------DEAR3(1)                                              --------->ATERF1(1)                                              <------NtERF2                                              --------->DEAR4(2)                                             <---------RAP2.3(1)                                             <---------ATERF1(1)                                             ------>NtERF2                                            <---------DEAR3(1)                                            --------->RAP2.3(3)                                ------                                            --------->ANAC46                                   <-----                                           --------->ATERF1(1)                               <------NtERF2            <-------MYC2               --------->MYB52(1)                                   ---------    --------->At5g28300             --------->At4g35610--------------->AtSPL3               ------>NtERF2   ----------->GT1                  <---------At4g35610--------->RAP2.3(1)                 --------->LBD16 ---------->RAV1(1)             --------->ANAC46<---------At4g35610                        <---------LBD16 ------>At4g35610         <---------HSFB2a(1)--------->ABI4(1)                            <------NtERF2 ----->RAP2.6(2)          <---------GLK1(1)--------->DEAR4(2)                           --------->DEAR3(1) --->ZAT2   ------->MYC2 <---------ARR14(2)--------->RAP2.3(1)                    --------->GLK1(2) --->At4g35610           <-----------ARR10 --------->ORA47(2)<---------ARR14(2)   --------->ARR14(2) ----At4g35610           --------->ARR14(2)--------->ERF1 <---------ALFIN1<----------DOF2------>NtERF2 ---->RAV1(1)--------->ALFIN1  --------->LBD16--------->RAP2.3(1)   <---------At4g35610 --------->ANAC46 >ZAT2      --------->TOE2(2)  ------>NtERF2--------->RAP2.3(2)     --------->At4g35610 <---------DEAR3(1) >At4g35610 --------->TOE1(2)<---------LBD16--------->DEAR3(1)   ------>ZmHOX2a(1)<---------ARR14(2) -At4g35610 <-------MYC3 --------->GLK1(2) --------->RRTF1(1)--------->ARR14(2)  <---------GLK1(2) ->RAV1(1)  ------->MYC3<---------GLK1(2)--------->ANAC46--------->LBD16 --------->TOE2(3)<---------LBD16   agcaacagtaacaacgtgcgactagagaatctccgcgctgctaacgccgccgctgcagccgcacatcctccgcttcctttaccgattccgacgccgggat  21756900                                 ----------->GT1                                 <---------ANAC55(2)                          <---------At4g35610    --------->YAB1       <---------DEAR3(1) --->ARR14(2)          <-----------HVH21                          <----------DOF2 ----ARR14(2)         --------->ANAC46                       <---------MYB59                  ------- >LBD16               --------->O2                <---------REM1(2)                         <--------   ttgatatcgtaaccttcttaatccccgtcgctgatatgtaaaacttcatttcttcacagtttccctaactttctcacaacgtttcttcagttccatcaat  21757000                                      ------>ZmHOX2a(2)                     ------>MYB46(1)                                     --------->GLK1(1)                      ------>MYB83                               ------>ZmHOX2a(2)                            -------->P                              --------->GLK1(1)                            --------->MYB52(1)                              <---------GLK1(1)                            ----------->RAV1(1)                              <------ZmHOX2a(2)                           --------->AtMYB61                             <---------ARR14(2)                          --------->MYB46(3)                             <---------AGP1                         --------->AtMYB61                            <---------CCA1(2)                       ------->GAMYB             --------->ANAC58<---------ARR11(3)                    --------->MYB46(3)             --------->ANAC46--------->AGP1                       --------->ANAC58                 --             --------->ANAC58--------->ARR14(2)                   --------->ANAC58            >>>>>>>     --------->At5g28300  <---------HSFB2a(2)                    ------->GAMYB             >>>>>>>>>TBF1    ----------->GT1       --------->HSFB2a(2)                   <---------MYB111(2)  --------->HSFB2a(2) -->WOX13(1) --------->ANAC55(1)    --------->ARR11(3)          --------->MYB46(3)   <---------HSFB2a(2) -ATHB12   --------->MYB52(1)--------->ARR11(3)                 <---------MYB55(2)  ------>ZmHOX2a(2)   ccaaaacagtaacacacggctctgttttccagatctctgatctccactatcagttcatcaaaaacaacaaccaaaaccaacagggatcgagaagaagaag  21757100                                                <---------HSFB2a(2)                                               --------->ETT(2)                                            <------MYB83                                            <------MYB46(1)                                    --------->ARR14(2)                                 --------->AHL20(2)                                    --------->GLK1(2)                           <---------ANAC46     <---------ATHB12               <---------ARR14(2)                  ------>ZmHOX2a(2)     ----------->TGA1   --------->ANAC58   --------->MYB59    <------MYB46(1)  <---------LBD16 ------->At4g35610      --------->ANAC58  <--------P          <------MYB83  --------->SPL7 >>TBF1               ---------->DOF2    <---------MYB52(1)<---------MYB52(1)----------->HVH21   aagctcaatgacgaagatgtgatcaaaagcaaaacgcgaatccagtaggtcgagagggactgtttggtttttgatctgtacgacgggaataaaaaacaac  21757200                                                                                                    -                                                                                          <---------YAB1                                                                                          <---------AHL20(2)                                   ------>NtERF2<---------MYB59                          --------->YAB1                               --------->MYB52(1)         <-------TEIL                   --------->AHL20(2)                       xxxxxxxxxxxxxxxx>smallRNA(i)  <---------AHL20(2)           <-----------GT1  <-             ------->TEIL --------->ANAC58 <---------ANAC58          ---------->DOF2     <---------AHL20(1)       <------ZmHOX2a(1)  --------->ANAC58 <---------ANAC58 ------->TEIL <---------ARR11(3)        <- ---------->DOF2     ---------->DOF2----------->ARR10--------->AHL20(2)  --------->ARR11(3)      ----   attcaaagaggaatgaatttttctaaagaagccaagcggacatatgcttaccaaaataaatgcatttttgtaaaagataatatttcaccaatattattcc  21757300                                                                            --------->LBD16                                                                          <---------LBD16                             <---------ICU4                               ------>NtERF2   --------->YAB1           --------->ICU4                                --------->LBD16  <---------YAB1          <---------ICU4                             <---------At4g35610 *TSS --------->YAB1     --------->AHL20(2)   <----------ID1      <-------TEIL -------->YAB1           <---------ATHB51     --------->ANAC58--------->LBD16 --------YAB1            <---------AHL20(2)   --------->ANAC58------>NtERF2<---------LBD16 --------ATHB12          --------->ICU4     ---------->DOF2  <---------ANAC46      <-----------GT1 -->ZmHOX2a(1)   ----------->GT1     <----------DOF2  ------------>CBF  <---------LBD16          ----   tatcataatagtcacgagtttgtgaaaataattagtattcttttaaaaaagccaaaaccaatgccgcgttcatctccgcgggaatttagcacatagtcta  21757400                                            ----------->GT1                                     --------->YAB1                                                 <                                     <---------ICU4                                             -----                                    <---------ATHB12                                            -----                                  --------->WOX13(1)                                            <----                                 <---------AHL20(2)                            <---------YAB1  <-----           ------->TEIL          --------->AHL20(2)                        <---------DAG2  <---------AHL20(2)      <---------ANAC46          --------->AHL20(2)                 <---------TOE2(3)     --------->YAB1 ------->TBP   ------->TEIL  --------->AHL20(2)      ----------->GT1       <----------DOF2 --------->AHL20(2)   taaatgttttgtgtatgtatgtatagatgtataaattaatcatgtgtagttaatagggtaaaacgaattatggaaaactttacgataactaaaataaata  21757500                                                                                                  <--                                                                                        ----------->RAV1(1)                                                                                        =============                                                                                       <---------ETT(1)                                                                                       --------->DREB2C(2)                                                                                       --------->DEAR3(1)   <---------ZAT6                                                                      --------->At1g77200 -----------GT1                                            <---------TOE1(1)           --------->DEAR4(1) ---->AHL20(1)                                      ------>ZmHOX2a(1)     <---------ANAC46<---------ALFIN1 ---->AHL20(2)        --------->ICU4            <---------ZAT18 --------->ARR14(2)    --------->DEAR3(2) -----AHL20(1)        <---------YAB1            --------->ZAT18 <---------ARR14(2)  <---------ALFIN1 ----AHL20(2)---------->DOF2                <------ZmHOX2a(1)  <------ZmHOX2a(1)<-----------HVH21 ===   ttttactggtaaatggaaagagtaatgaatgatgcagacaattacaggagtgtccttctctacgaggatttgtattttgtggagtcacaccgacacatta  21757600                        --------->RAP2.3(3)                        <---------ZAT18                        --------->ZAT18                      <---------At4g35610                      <---------ATERF1(1)                      --------->PCF2                                      <---------WOX13(1)                      --------->At4g35610                               <---------ICU4                     <-----------TCP11(1)             ------>ZmHOX2a(1) --------->ATHB12                    --------->ATERF1(1)               =============HOX2a_HOX2a               <-----------RAV1(1)                    --------->LBD16  --------->AHL20(2)           ----------------->AGL1                    <---------LBD16   <---------AHL20(2)       <---------HSFC1(2)                      <---------MYB52(1)     <---------MYB52(1)       <---------HSFB2a(1)  <-------MYC3      <-------GAMYB      --------->ORA47(1)       --------->HSFB2a(1)  ------->MYC3     <---------ANAC58   --------->DEAR3(1)                  <       --------->HSFC1(2)<---------ALFIN1    <---------ANAC58 <---------At5g28300                 <--  --------->ALFIN1  <---------PCF2          <-------TEIL    <------ZmHOX2a(2)                     <-- ---------RAV1(2)--------->ALFIN1          <---------ANAC46--------->ARR11(3)                    <--- =========RAV  --------->ALFIN1         <-----------RAV1(1)<---------ARR11(3)                    ---- ==========================RAV       <---------AHL20(2)   <---------GLK1(1)                     <----   gcagggggagggttccagtgtgggagcccacatggagaattaatggtgcgttattcctggagatcaccgtccattaattgctctcttatggctatggagt  21757700                                          --------->AHL20(2)                                       --------->WOX13(1)                                      --------->AHL20(2)                                     <---------ATHB12                                   --------->WOX13(1)             <---------ALFIN1 <---------MYB46(3)               <---------AHL20(2)    --------->ANAC58<---------HSFB2a(2) --------P                        --------->AHL20(2)    --------->ANAC58--------->HSFB2a(2) ----MYB46(1)                  <--------HAHB4          --------->WOX13(1) ----MYB83                     --------->YAB1 --------->TOE2(3) ------->TEIL ------AtMYB61                <---------YAB1  --------->YAB1   <-----------GT1 ----->MYB111(1)            --------->YAB1<---------AHL20(2)--------------->AtSPL8             <----- ----P                   <-----------GT1 <---------ATHB12<---------ATHB12       --------->ATHB12   tggtagttaaccaagtttttgggattttaactataattaatcaattaatcttagtagcaatcaatgtaccacttccacaaacttattggtctcaagtctt  21757800  Previous    Next  AGI:  At3g58790.1    Description:  GAUT15 (Galacturonosyltransferase 15); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to GAUT14 (Galacturonosyltransferase 14), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT5G15470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70035.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67083.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 21753048    to: 21757301    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g58795.1    Description:  other RNA Range:  from: 21756684    to: 21757522    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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