AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
----------->GT1 ====================================HOX2a_HOX2a ------>ZmHOX2a(2) <------ZmHOX2a(2) <----------DOF2 =====================================HOX2a_HOX2a -----NtERF2 <---------AGP1 ---------->DOF2 --NtERF2 --------->AGP1 *TSS <------ZmHOX2a(1) --
cgtcgtcttcgaagtcactcacgaccatcgagagatctgatgattttggtaaaatatcaaaaaaggacttcaacttttcacttaagtcaaaacaagcccc	19325600
<-----------RAV1(1) ----------->GT1 <----------DOF2 ----------->GT1 --------->TBP <-------TEIL <------ZmHOX2a(1) <-----------GT1
tataaataaattctgttatttaagccttgaggcttgagctgcgtctttgttgttcactaggagagttatttgagcggataatttactaaaactgaatgtc	19325700
---------->DOF2 <-----------GT1 ---------->DOF2 ----------->GT1 <-------
catctcccaaacaaacattttacgttttcatgttatataaaagaatactatatcgttagctagaatattgtagttaaatattaaagtagtgtattttaca	19325800
<----------DOF2 <------ZmHOX2a(2) ---------->ID1 ---------->DOF2 ----GT1 <----------DOF2 ----------->GT1 ----------->GT1 ------>ZmHOX2a(2)
ttttgtctgaactttgtcatctttgtttcatgaatggtcaatggtgaataatggggagagaaggaacgtgaataaagggatccacaagtgtctccaccat	19325900
<----------ID1 ----------->GT1 < ---------->DOF2 ---------->DOF2 = ------>ZmHOX2a(1) ----------->GT1 ----------->GT1 ------ <----------DOF2 <------------CBF ---------->DOF2 ======
tttctgagtaaaaacaatcacatcctttcattttcaaacccctaaaccaaattgtaaagtcagaaaaaaagaaaaaaagaaacacacatacaaatcgaaa	19326000
---------->DOF2 *TSS ------------>CBF <---------TGA1a <---------O2 --------->O2 --------->TGA1a ----------DOF2 ===================bZIP_DOF =========================bZIP_DOF ---->DOF2 <---------ALFIN1 <---- =========================bZIP_DOF <-----------------AGL1 ---------->DOF2 ----------->RAV1(1)
agcttttcttcatctcccacgttacaataagccctaagaacgaataaggcaactacagagagaaaagatgaattcaactacaacaaaaaacgtttgtgga	19326100
<-----------------AGL1 <---------------AtSPL3 --------------->AtSPL8 <-----------RAV1(2) ------ID1 ----------------->AGL1 ------>ZmHOX2a(1)
gacaaatggtaccttaacctagacaggccagaagaggcattgaagattcttgtattcattgccattttcgtcgtccgaactctcctccattatctcatga	19326200
------->TEIL <----------DOF2 <----------DOF2 ------->GAMYB <----------DOF2 -------->P <---------ALFIN1 <----------DOF2 <----------DOF2 <----
agcctctaggccaaccttacctcaccaccgactttgctgtatgtcaaatatctttttgttctttgtctatctcttttgatttctatattaactcaaattt	19326300
----------->RAV1(1) -------GT1 ----------->GT1 ------>NtERF2 ------->GAMYB -
tctatgcatcagatagggctaattctaggtaatattccaaggtttcgaggggcattctcggggccttactctataaccctcaacaacataatagaatttg	19326400
<-------TEIL ---------->DOF2 ------>ZmHOX2a(2) ------->GAMYB ---------->ARR10 <-----------HVH21 ------->TEIL -------->P <-------TEIL
gaatgatctgccatatgtttgtcatgggtctagagatgaatccaagcgttcttctcagaccaccaaccaaagatgcattcattgcctacacaagcatgat	19326500

AGI:	At3g52072.1
Description:	other RNA
Range:	from: 19323662	to: 19325555	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At3g52080.1
Description:	CHX28 (cation/hydrogen exchanger 28); monovalent cation:proton antiporter. similar to ATCHX15 (cation/hydrogen exchanger 15), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT2G13620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40816.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153)
Range:	from: 19326021	to: 19328821	Orientation: Forward
Links:	TAIR MIPS

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