AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
---------->DOF2 <---------ALFIN1 ------->P <-------TEIL ---------->DOF2 ---------->DOF2 ------>ZmHOX2a(1)
cctacccaccgaaagttcgttcactccgcaaaaccagaagcttcaagtagagcactgaagaccctctaaagaaattgcacatctagtcttcctcttccaa	16766800
- <----------DOF2 <---------ALFIN1 ---------- <-----------GT1 <----------DOF2 ---------->DOF2 ---------->DOF2 ----------->TGA1
acgaaattaaactcagatttaacaaacgaacgaaactttctttcatatgaaggaaagcgtccaccattccaaagtagcatgaagcatcacaatgacgtaa	16766900
---------->DOF2 --------->AtLEC2 ------->GAMYB <------NtERF2 ------->P ------>NtERF2 ->STF1 <-----------TGA1 ----------->GT1 <----------ID1
gcaaccaaaaagattttccggtgagacttaacgtcgccatgcccatcaagtgaaactactacaaaatttgaacgacaaggcttatgaagccgaaactctt	16767000
---------->DOF2 <------NtERF2 <-----------------------TaNAC69(2) < <----------DOF2 <----------ID1 ------>NtERF2 <-- <---------ALFIN1 ---------->DOF2 ---------->DOF2 ---------->DOF2
aaacttccactttttcttcgtaatgaagaaacttaataagtttattagaaataaagacaaataaaggcaaaataccaaagaacggcgacgataaaaccgg	16767100
--------------->AGL15 <---------------AGL15 <-----------------AGL3 ---------->DOF2 ----------->GT1 <---------------AtSPL3 -----------GT1 <------------------SPL14 --------DOF2 ------------------>SPL14 -
atttaccggtaactataactagaactcaccgtacggtattgaaacaaaaagttggaccatgtccgaacacaacctcacaaacatacgggaaggcatacga	16767200
<----------DOF2 ---------->ID1 <-----------GT1 <-- --------->DOF2 ---------->DOF2 *TSS ------>ZmHOX2a(2) <------------CBF
aacaaagaattttttctttttctcaaaattttagagaaagaagagaataaaaaaattctgatcgaaaatagcttacttaaaaatcataattgaatagtat	16767300
------->GAMYB <-----------GT1 --------DOF2 <<<<<<<<<GT-1 <---------ALFIN1
cttttgtttttaaactaatttagtctatataataataatattattaaccatcgtaaaccacacatgatattcaatacttataataaattaatcgcataaa	16767400
----------->GT1 ----------->GT1 ----------->GT1 ---------->DOF2 <-----------GT1 ------>ZmHOX2a(1)
atacaatacttaaaacgagtgttatataattttacgtaacgtaaaacaatacaaaattttaattcctgaacgaataaaacgagtatattaattaatttat	16767500
-------->ATHB1 <---------ALFIN1 ------>ZmHOX2a(2) ------>ZmHOX2a(2) <---------ALFIN1 <-----------GT1 <-------TEIL
tgatcgtattaaaacgaatatgatccaattaagattacaattactaaaatccccacactattattgtcattatttaactatggcagatagatagatacag	16767600
------>ZmHOX2a(2) <-----------ARR10 <------ZmHOX2a(2) <------ZmHOX2a(1) <------NtERF2 <--------- <------ZmHOX2a(1) <------------AtMYB77 ------->GAMYB - ---------->DOF2 <------ZmHOX2a(1) ------->GAMYB ------>NtERF2 <---------ALFIN1
aaccgtaaaggacgttaggaagaggaagaacgttgacgaagtcaacaacgaacagaaaccgtcgatttgaggcggctctaatctcaaccacacgatcttc	16767700

AGI:	At3g45638.1
Description:	other RNA
Range:	from: 16766200	to: 16767248	Orientation: Reverse
Links:	TAIR MIPS

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