Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->YAB1                                                         --------->YAB1                                                      <---------ICU4               <---------AHL20(2)                                                      --------->YAB1               <---------AHL20(1)                                                   --------->YAB1                  --------->AHL20(2)                                  <---------AHL20(2) <---------YAB1               --------->AHL20(2)                                  --------->AHL20(2) --------->ICU4               <---------AHL20(2)           <---------TOE1(1)  --------->AHL20(2)  <---------YAB1              --------->AHL20(2)           <---------TOE2(1)  <---------AHL20(2)--------->TOE1(3)   --------->AHL20(2)   <---------AtLEC2        <---------ARR11(3)   --------->YAB1      <---------AHL20(2) <-----------GT1           --------->AHL20(1)   --------->TOE2(3) --------->AHL20(2)          -------   aatttacatgaatacgaggtttgaaagaatatataatttataacttaaaaccataataataagcataaatttatattagatttattaaattttcaaccga  9563900                                                 --------->AHL20(2)                                                 <---------AHL20(1)                                                 --------->AHL20(1)                                                 <---------AHL20(2)                                                <---------ATHB12                                                --------->AHL20(2)                                           <------ZmHOX2a(2)                                          <---------ARR11(3)                                          --------->AGP1                                          <--                                          --------->ARR11(3)                                 <------ZmHOX2a(2)                                         --------->GLK1(1)                                  ---------                         <---------AHL20(2)--------->CCA1(2)               --------->At4g35610   <---                    <---------AHL20(2)   <---------GLK1(1)     --------->YAB1               <--------  ---------->DOF2 <----------DOF2   ---------->DOF2           <---------YAB1      <---------ATHB12--- >GAMYB        --------->ICU4     <---------ATHB12   --------->AHL20(2)    <---------At4g35610 ------   aataaaaagtttttgtaattcttttattttatgccaatgaaagagatccaataaattgaatactatcataccttgtaagcttcaatgaggggaagatcaa  9564000                                                                                        --------->O2                                                                                        --------->TGA1a                                                                                      --------->MYB52(1)                                                                              <---------ICU4 -------ICU4                           <---------ICU4                         --------->ATHB12 >ARR11(3)                          <---------ICU4                           --------->ICU4 ------ATHB12                       <--------HAHB4                     --------->At5g28300 -ARR11(3) <----------DOF2          --------->ATHB12                 --------->ZAT6 --------->MYB46(3) ------>YAB1                       <---------YAB1           <---------GLK1(2)<---------YAB1 --->WOX13(1)                      --------->ICU4         --------->ICU4    --------->TOE2(3)   tcatggatgggttctttgtttcgaaaccagaaatgtcatcattaagaccaagactttgaaaagattgtctcacagtaacattattagccaacgtctcatt  9564100                                                                                                    -                                                                                --------->ZAT2      -                                                                            --------->ANAC46       <-                  --------->ANAC58                                        <---------ALFIN1         --                  --------->ANAC58                                       --------->ZAT14        -----             --------->ZAT18     --------->At4g35610             --------->ANAC58<---------ANAC58----          <---------O2     --------->MYB52(1)                    --------->bZIP60(2)   ---------->CDC5       <------ZmHOX2a(2)   ------>MYB83             --------->ARR11(3)<---------At4g35610       -----      --------->ARR11(3)   ------>MYB46(1)          <---------ARR11(3)--------->At4g35610       -----      <---------ARR11(3) <---------MYB59          --------->ICU4 --------->ANAC58<---------ANAC58----   tgtagctagatcaagtggccaagtaaacctaacacagttgaaacccattgccattatcttcttggccaagtcatctacactctgcttgctcagcccttcc  9564200                                        <---------ZAT2  --------->AtMYB61                     --------->At4g35610                                     -----  <---------ALFIN1                      --------->ZAT2                                          <---- --------->MYB46(3)                     <---------At4g35610                                     ----- ----->NtERF2                          ------>NtERF2                                            <---- ---------->RAV1(1)                --------->O2<---------DAG2                                  ------ --------ALFIN1                    --------->ANAC58                                            ------ ------->DEAR3(1)                  --------->TGA1a                                             <----- ---->ANAC46                       --------->ANAC46     <---------DAG2                         <----- -->NtERF2<------NtERF2            --------->ANAC55(1)  <----------DOF2 --------->TOE1(2)      ------ ---->ANAC58                       --------->ANAC58  ---------->ID1    ==============================HOX2a_HOX2a ---->ANAC58                       =========================bZIP_DOF   --------->MYB46(3)     <------ZmHOX2a(1) ----->LBD16                     <---------ALFIN1<----------DOF2       ------>ZmHOX2a(2)     --------   gccaccacaggctgcaaatgtgatggccaattcacacacgccagcttcactctttgccctttttcgtcgatgatccaacgagagtttgtagagagaggat  9564300        <----------DOF2 ---->GLK1(1) -----GLK1(1) ---->CCA1(2)                                           <---------ANAC58 ------TaMYB80                                          <---------ANAC58 --->ARR11(3)                                          <-------TEIL --->ARR14(2)                                        --------->TOE1(2) ----ARR14(2)                                      XXXXXXXXXXXXXXXXXXXX>MIR852   ----------->GT1 ----ARR11(3)                --------->YAB1 --------->DAG2              ---------->ID1 ---->TaMYB80       <------ZmHOX2a(1)      ---------->DOF2         <----------DOF2                  < --->ARR10     <---------REM1(1)       <---------YAB1--------->TOE2(2)<-----------RAV1(1)  ------->TEIL   atgccatgttctttgtgatgaaggagaagaatgagaagaagatgataaagcaaaacatgcgtcttagctcttttgttgtcttcatgttaaatgtatttag  9564400                                                   <--------HAHB4                                                   --------->YAB1                                                   --------->ATHB12                                                   <---------ICU4                                            <------MYB83                                            <------MYB46(1)                                            <---------MYB46(3)                                          <--------P                                        <-----------RAV1(1)                                      <------MYB46(1)                                      <---------ANAC46                                      <---------ANAC58                                      <------MYB83<---------ATHB12                                      <---------ANAC58                                     <---------MYB46(3)                           --------->ICU4                                     --------->MYB46(2)               <-----------TBP                                     --------->MYB111(1)              --------->AHL20(2)                             <---------YAB1<---------AtMYB61          <---------AHL20(2) ---------AHL20(2) <----------DOF2   <---------AtMYB61              <-----------TBP--------->ATHB12   aattttttggggttttgttttctttttggttatttttgtttggtgttggtgaatcatttcgaagagacttatatatatagagaaatgatttagaagtgaa  9564500                                                                                     --------->YAB1                                                                                     <---------ICU4                                                                                    <---------ATHB12                                                                                  --------->WOX13(1)                                                --------->ATHB12         <---------TOE2(2)                                          <---------AHL20(2)             <---------TOE1(2)                                       --------->AHL20(2)               ------>ZmHOX2a(1)             <---------MYB52(1)        --------->AHL20(1)              --------->TOE2(2)           <---------HSFB2a(2)    --------->AHL20(2)           <-----------GT1  ------------>CBF           --------->HSFB2a(2)   <---------ATHB12           --------->YAB1   <-----------GT1     <---------ICU4            --------->WOX13(1)     <---------ZAT6--------->ARR14(2)       <-------    <---------ATHB12         ------------>CBF--------->ANAC55(2)    <---------ARR14(2)     <---------DAG2    --------->ICU4    <---------ANAC46 <---------AHL20(1) --------->AHL20(2)<<<<<<<<<MYB98 <---------   gttgaaatcatttctggtacttaggggtgtattcaatcaaatattttaagtgatttgtgttaaaataacaaatcctatgttactcaatcatagcttttta  9564600                  <---------AHL20(2)                     <---------------AGL15               <---------TOE1(2)                         --------------->AGL15   <-------TEIL<---------TOE2(2)                   <---------ICU4              --------->ATHB12 ----TBP  <---------ARR11(3)            --------->ARR11(3)                --------->AHL20(2) -DOF2    --------->ARR11(3)            <---------ARR11(3)                <---------AHL20(2)   aaagtttcatgaaatcttatgttattgaactagtgattctaaaatctacttaaaaattcccagttattgaaaacattttaatgactgaatttttagtgac  9564700                                         --------->ATHB12                                      --------->ANAC55(2)                                      <---------ANAC55(2)                                  <-----------HVH21                                 --------->ANAC55(1)                                 <---------O2                                 <---------ICU4                          <---------ATHB12                                    <--------ATHB1                        --------->WOX13(1)                                    --------->YAB1                 <---------ANAC46--------->O2                     <---------TOE2(2)               <---------ANAC46  --------->ANAC58                 <---------TOE1(2)               <------MYB83      --------->ANAC46                ------>ZmHOX2a(1)               ----------->GT1   <---------ANAC55(2)            --------->TOE2(2)               <------MYB46(1)   --------->TGA1a             <---------ARR14(2)              <---------DEAR3(1) --------->bZIP60(2)    <-----------GT1      <---------ATHB12              --------->ALFIN1   --------->ANAC58    --------->YAB1          <---------ATHB51              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->AHL20(2)        --------->ICU4              <---------AtMYB61<---------ALFIN1<---------ZAT6--------->ARR14(2)           ---------->DOF2   ttaagtgaattttagggtggtgtattcaatcaaacacgtcaagtgatttgtgttaaaataacaaatcctatgttattcaataatggatttttaaaagtct  9564800  Previous    Next  AGI:  At3g26140.1    Description:  glycosyl hydrolase family 5 protein / cellulase family protein. similar to glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] (TAIR:AT1G13130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42484.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Ricin B lectin (InterPro:IPR000772); contains InterPro domain Ricin B-related lectin (InterPro:IPR008997); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 9560919    to: 9564307    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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