AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
---------->DOF2 ---------->DOF2 <-----------HVH21 ----------->GT1 ----------->GT1 ---------->DOF2 <-------TEIL
tacacagaaggttatattacacaaacgctaagaataaatgagaaaaaacttacaatgaaagtgtcattgaaagatgcaaagatgtgaacaacaccaaaaa	3624500
<-----------GT1 ------>ZmHOX2a(1) ------>ZmHOX2a(1) ---------->ID1
cttgctctccttcacgaacagaaggtccaagagtcacagtctcaacctttggctccttagtttttctcttcgactattatatacagagagaacaaaacac	3624600
<-----------GT1 <--------HAHB4 <-----------GT1 <-----------HVH21 -------->P -----
atttgagaaacaaattgttcactggtatttaaccataattacataccatcagctcaatatcaatacatggagattaatcagacaacccctaaactatgaa	3624700
====== ------ <------ZmHOX2a(2) ======= <------- ==========================HOX2a_HOX2a ---------->DOF2 ========================== -->TEIL <------ZmHOX2a(2)<---------AtLEC2 <------ZmHOX2a(1) <-------
tcagacaagccaagatcaataagtcaattttgcatagctgaaacaaacgtataagtatggaacatcggaaactagcaggactaagtgaaatcgcagatct	3624800
=================================HOX2a_HOX2a ------>ZmHOX2a(1) ===========HOX2a_HOX2a >ZmHOX2a(2) ===========HOX2a_HOX2a ----ARR10 <-----------RAV1(1) =HOX2a_HOX2a >>>>>>>>>MYB2 ----------->GT1 --AGP1 ------->GAMYB ------>ZmHOX2a(2) ---------->DOF2 <------ZmHOX2a(2)
caatttcctaacagactaacgaaaaccaaatgatctggcacagaaaaatgttggagagaaagagcttaccatcttcaacaatggatcagagaagagacga	3624900
----------->TBP --------->TGA1a <---------TGA1a <---------O2 --------->O2 --------------- *TSS ------>NtERF2 <-------------- <------ZmHOX2a(1) ------->TEIL ----------->GT1 <
aacgataagtgtttttagattctgctcagtgtaaacaagaaggacactcacggcgctacaaatgcacgttatatattagggttacatcggagtacctcta	3625000
----------->GT1 <-----------------------TaNAC69(2) >AtSPL8 <---------- -AtSPL3 ---------->ID1 <--------HAHB4 ------------CBF <----------DOF2 <------NtERF2 <------NtERF2
tgaattgacgtaaataccctcatcactttcattacccattacgtcgtcgtttggtgtttttttttcttaaacattacgtcgtcgttcgattattactatt	3625100
----------->GT1 <-----------GT1 -- -GT1 ----------->GT1 -------->ATHB1 ---
agtcttgttaattttcttgatttttttttgacaagtaacaaaattcaccagatttcttattggaaattattatttgacaaatgtgaacaacttcaccttg	3625200
---->ZmHOX2a(2) ---------->DOF2 ------------>AtSPL8 ---------->DOF2 <-----------GT1
atcgtaccatcgtacttggtcttatgaagaacaaagaagttttcaagttataacagataactatgtaatttgaatttgactccatagttaaagaatatga	3625300
<------ZmHOX2a(1) <----------ID1 <---------------AGL15 ----------->GT1 ---------->DOF2 --------------->AGL15 <----------DOF2
tgggaaaaaggaccaaaacgattctgattatagaagagaagaagaatttcattataatacttttgaattcatacggaaacatcatttctcaacaagaacc	3625400

AGI:	At3g11510.1
Description:	40S ribosomal protein S14 (RPS14B). Identical to 40S ribosomal protein S14-2 (RPS14B) [Arabidopsis Thaliana] (GB:Q9CAX6); similar to 40S ribosomal protein S14 (RPS14A) [Arabidopsis thaliana] (TAIR:AT2G36160.1); similar to cytoplasmic ribosomal protein S14 [Brassica napus] (GB:AAO41731.1); contains InterPro domain Ribosomal protein S11; (InterPro:IPR001971)
Range:	from: 3623463	to: 3624946	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At3g11520.1
Description:	CYCB1;3 (CYCLIN B1;3); cyclin-dependent protein kinase regulator. Identical to Cyclin-B1-3 (CYCB1-3) [Arabidopsis Thaliana] (GB:Q39069;GB:Q84MB0;GB:Q9CAX5); similar to CYC1BAT (CYCLIN B 1,2), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G06150.1); similar to mitotic cyclin [Sesbania rostrata] (GB:CAA99990.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); conta
Range:	from: 3625330	to: 3627279	Orientation: Reverse
Links:	TAIR MIPS

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