AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------ =============== <-----------HVH21 <------ZmHOX2a(2)
atgagtctccctacatgtcaaaagataacacaatgtagaagataataaacagataagaatgttgaagatgagtttcaacacaatttggatcattgcacaa	3612000
------->TEIL <-------TEIL <------ZmHOX2a(1) ----->RAV1(1) =========HOX2a_HOX2a <------ZmHOX2a(1) ----------->ARR10
cattaggaacgtacatccgagatggaagttgcagaggaaccagtgaaggcaattcgatcgataagcttcgctgcaattgagacatgactctgattctcat	3612100
----------->RAV1(1) ----------->RAV1(1) ---------->DOF2 ----------->HVH21
cagctccaacaaattcttattctattggaatcccaaaatcgcaacattcaaacaagaatcagtaatccaatcagtgacaagacaaatttagagaatcgat	3612200
<------NtERF2 ----------->GT1 ------>NtERF2 ----------------->AGL1 ----------->HVH21 -------->ATHB1 ----------------->AG ------>NtERF2 ------
ctagaattctaagaacaagtaatcaactggacttggaatcaattattcagatgaattacccaaacggaaattaatactccggctaaacgacggcgaggtc	3612300
----------->ARR10 ----------->HVH21 <-----------HVH21 ----------->TGA1 *TSS <-----------HVH21 <----------DOF2 <---------------AtSPL8 --->PCF5 <------ZmHOX2a(1) ----------->GT1 ---------->DOF2
ccttgccggtgacggaggaaagatactctaatcgaacggagatggtaatactttctgtttgagaaaaaagtactaacagtgtcgaaccaaatcgaatttt	3612400
----------->GT1 ------>ZmHOX2a(1) <-----------GT1 -------->P ----------->GT1 ---------->DOF2 <----------DOF2 <-------
attttgaaccaaacggttttacttatccttaaaccaaactaacccgtaaatactttggttcccagttccgttcgctggataccgggaattacatttaacc	3612500
---------->DOF2 ----GT1 <-----------GT1 <---------ALFIN1 ------->TEIL <-----
ggatattagaattacaacattttttgttttgttttgattaataacagagttctacacttctacttctaacttgtgaaccttaaagttccatagttaagga	3612600
---------->ID1 -ZmHOX2a(1) ----------->RAV1(1)<----------DOF2 ----------->GT1
aaatctcatgatatacaagattagggcaacatttttttgttttgtctttaacttatctaataaaaacaaaattttagtaaattcgaaattcagtttggcc	3612700
------->TEIL <---------ALFIN1 <---------------AtSPL8 <-----------HVH21 --------------->AtSPL3 <------ZmHOX2a(1) <-----------ARR10 ---------->DOF2 <------ZmHOX2a(1) <-
tgtaggagaggtccgaccacccatccaatatctccggtttatgaaacatggactagattataaaagaatcttttatcgtacgaggaaatttgaacgtatg	3612800
<------NtERF2 <------NtERF2 ------>NtERF2 ----------->RAV1(1) <------NtERF2 <------NtERF2 <------NtERF2 ------>NtERF2 --------------->AtSPL8 ------>NtERF2 <---------------AtSPL3 <---------ABI4(2) --------------->AtSPL3 <------NtERF2 --------->ALFIN1 <---------PCF2 --------->AtLEC2 ---------->DOF2 <---------PCF5 ------TEIL <----------DOF2 <------ZmHOX2a(1) --------->ALFIN1 ----------->GT1 ----------
attcatcatgcatgctttgccgattttctaggataaaaggtggcgtaccatcaattggatggggccgccgcagaaattagttactagtactaccaaagaa	3612900

AGI:	At3g11470.1
Description:	4'-phosphopantetheinyl transferase family protein. similar to COP1-interacting protein-related [Arabidopsis thaliana] (TAIR:AT2G02770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45640.1); contains InterPro domain 4' (InterPro:IPR008278)
Range:	from: 3610153	to: 3612376	Orientation: Reverse
Links:	TAIR MIPS

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