AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<-----------HVH21 ------>ZmHOX2a(1) ------->TEIL ================HOX2a_HOX2a <------ZmHOX2a(1) <----------DOF2 ------>ZmHOX2a(2)
actagcgagtttatcaggatgatgcttcaatgcagcttcacgataacttttcctaatctgatcttccgtcgcaagatatcttagattgctcaaacccaac	3607100
<-----------RAV1(1) <----------DOF2 --------------->AGL15 <-----------------AGL1 <----- <-----------RAV1(1) <----------DOF2 <----------DOF2 <--
aacgcatagtggtcttgttgctgggtaccagacttcttctttcctttgttggcatacgagttgaatgaaggaacatattccttctctttatcatctccca	3607200
<---------ALFIN1 <-----------GT1 ----------->RAV1(1) ----ALFIN1 ---------->DOF2 <-------TEIL --------DOF2 <-----------RAV1(1) --------->AtLEC2 ----------->HVH21 ------
ctttcttatcaccaccttcatcgtctgtgggttcttctgcacaaccatgcagtttaagcgcagcagaatggaaggcatgaccagcaggttcacggtttaa	3607300
<---------------AtSPL3 <------ZmHOX2a(1) ------>ZmHOX2a(1) ---------->DOF2 <-----------HVH21 ---------->DOF2 ----------------------->TaNAC69(2) ---->DOF2 ---------->DOF2 --------->AtLEC2 ----------->GT1 ------
agccttcacaggaagacaattggaaaaagcaaagaacggttttccatccacaagctcctcagagtacgtaattagcctaatagcagactcacttctccgg	3607400
<--------ATHB1 ------->TEIL <-----------RAV1(1) <------NtERF2 <-----------GT1 <---------ALFIN1 <------------ATHB5 >NtERF2 ----------->GT1 <---------ALFIN1 <-----------ARR10 ---------->ID1
ctcggcatgatgaacagtttatacgagctgcaccttactccaagtgaatatccaccctgatttctgtcgcaatgattaagcattaaccaagtaaacgaga	3607500
<-----------RAV1(2) <------------CBF ------------>CBF ---------->DOF2 ----------->GT1 ---------->DOF2
gaacagcacaataaactccagatgttacacaaaggctaatggtttcacaaggcctggtttaaaaacacattgttttcgcaagacactgatcaaagctact	3607600
---------->DOF2 ---------->DOF2 <----------ID1 <-------TEIL ---- ------->TEIL ----------->TGA1 ------>ZmHOX2a(2) ------------>CBF
aatacaactccgagtatgaaactccataaaaatgacgaaaaagaaaggaacatgatcgcaaaatacatctcataagaaccctagaaaccaatcatactcc	3607700
----------->GT1 ------------>CBF ------ <--------P --------------->AtSPL8 ------>ZmHOX2a(1) ---------->DOF2 -->ZmHOX2a(1) <-----------GT1 <------------CBF =================================
taaggttagttattagttattactcagtaccatcaattgtctaatctagattttctactatcagcttatcctccccttatgcacaaacaaaagatgatct	3607800
>ZmHOX2a(2) <-----------GT1 =HOX2a_HOX2a <-----------GT1 -------->P ----------->RAV1(1) -----
tattcaatcttaagatatttcacgaatcaatcagataacattcgaaaaccactcagctaccataagtaataaaacaacagtgattaaaccgattctctta	3607900
------>ZmHOX2a(2) <------ZmHOX2a(2) ------->GAMYB -------->P ------>ZmHOX2a(1) ====================HOX2a_HOX2a -------->P <-------GAMYB --->P ===================HOX2a_HOX2a ------>NtERF2 ------>NtERF2 <---------ALFIN1 -------
ccagaaactgagctcctagtaaccccgatccgttggtcggaagctgctccggctattacttgccgcgcgagcttccctccaacctacggcggttgagaaa	3608000

AGI:	At3g11450.1
Description:	DNAJ heat shock N-terminal domain-containing protein / cell division protein-related. similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT5G06110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41896.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding
Range:	from: 3605226	to: 3607483	Orientation: Reverse
Links:	TAIR MIPS

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