Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <----------DOF2                                                            --------->ZAT2                            <---------AtMYB61           <xxxxxxxxxxxxxxxxsmallRNA(i)                            <-----------RAV1(1)         --------->ALFIN1                      <------MYB46(1)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <---------ANAC46              <-----------RAV1(2) <-----------GT1                     --------->MYB59         xxxxxxxxxxxxxxxx>smallRNA(i)                        ----                   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxsmallRNA(i)            <-----                <---------TOE2(3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              -------                <---------TOE1(3)        <---------AHL20(2) <---------ZAT2                   --------               ---------->DOF2  <---------SPL7    <xxxxxxxxxxxxxxxxsmallRNA(s)       <---------ARR11(3)   ----------->RAV1(2)<------MYB83  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   --------->ANAC46 --------   aatccatctgggttttttaaagttgggtttttggtggacggatttattttggattcaggtcgggctgggcttttttacccacaacaacatctctaaccgt  16633900                                                                                                    <                                                                                                    - ----->SPL7                          <-----------GT1 ----------->GT1                             <--- ----SPL7               <---------MYB59            <------ZmHOX2a(1)                      <---------ANAC58 >GAMYB                <---------ANAC55(2)      --------->DAG2             <-------TEIL   <---------ANAC58 ------->AtSPL8        --------->ANAC55(2)     ---------->DOF2  <---------HSFB2a(2)       <---------ANAC46 ------->AtSPL3      --------->AHL20(2)  ------>ZmHOX2a(1)   --------->GLK1(2)          ------>ZmHOX2a(1)   accaattcattttctatgtagaattacataactatagtttttccttacaaaaaggatgaaaaaattctggtaaatgatacattttgcatccttcgtgttc  16634000                                 <---------------AGL15                --------->YAB1                           --------->ANAC46                     --------->TOE2(3)        <---------TOE2(3)                           --------->ANAC58            --------->ANAC46               <---------WOX13(1)                     <---------ICU4                    --------->ANAC58         -------->HAHB4                    <---------YAB1                <---------------AtSPL8        --------->ATHB12        --------->ANAC46   --------->ANAC58  --------->AHL20(2)----------->GT1 <---------YAB1     --------->AHL20(1)  <-----------GT1----------->GT1--------->ANAC58        <---------ATHB12 ---------YAB1      --------->ICU4  --------->YAB1<---------------AtSPL3       --------->ICU4<------- -------->AHL20(2)<---------ICU4 --------->YAB1   --------->MYB59     <---------ICU4--------->ATHB12 ------YAB1    --------->ANAC46  --------------->AGL15<-------TEIL --------->YAB1 <---------WOX13(1)   ttataaatatactaaacacatcattattcacacaactataagaagaaaaaaataggtacgaaacattgttaataatcccaaatgattgattgaagttacc  16634100                                  <---------ZAT18                              <---------------AtSPL8                              --------------->AtSPL8                           --------->ATHB12                          <-------TEIL                       <------MYB83                       <------MYB46(1)                      --------->MYB59                  ------>MYB83                      --------->MYB111(1)            <---------MYB59                      --------->MYB46(2)        --------->ANAC58                    <---------MYB52(1)          --------->ANAC46                  --------->ANAC46                <---------ANAC55(1)             --------->ANAC58                --------->MYB52(1)                --------->ANAC55(2)    ---------->DOF2 ------>MYB46(1)    ------>ZmHOX2a(2)                <---------ANAC55(2)  --------->ANAC46--------->TOE1(2)   <------ZmHOX2a(2)                <---------ANAC46  --------->ZAT18    <---------MYB111(1)--------->ARR11(3)                <---------ANAC58  --------->ZAT14   --------->HSFB2a(1) <---------ARR11(3)          <                <---------ANAC58  <---------ZAT14  ------->TEIL         <---------AGP1              - ----GT1      <-----------GT1 <---------ICU4  --------->ZAT6           <---------CCA1(2)           <-   acatttattctttgaattacttgttaggttgattagtacacaaaagtaacacgaacctactaaacaacttgttagatctcataaacggcccattaccgat  16634200                                           ------->TEIL                                           --------->ARR14(2)                                           <---------ARR14(2)                                    <---------SPL7           <---------MYB52(1)   <---------bZIP60(1)       <-----------------AGL1   --------->bZIP60(1)       <-----------------AG     --------->O2   ---------->DOF2              <---------O2         <----------DOF2      <---------MYB52(1)     ---- ---------At4g35610          --------->ANAC46       <---------ICU4       <-------GAMYB          <---- -------->At4g35610     --------->ANAC46  <---------CCA1(2)          <-----------HVH21      <-------- --------TOE2(3)      <-----------GT1   ------>ZmHOX2a(1)    <----------DOF2              <----------DOF2   taagctaaagcccgttttggaatttcactaaacgacgtcgtcctgtatccctcatcttttcttctttaacttgtcagttattttctcagtttcttttatt  16634300                                                  <---------ICU4                                                  <---------AHL20(2)                                                  --------->AHL20(2)                               <-                                              --------->AHL20(2)                             --------                                   <---------ARR14(2)                                     <---------HSFB2a(2)                                   --------->ARR14(2)                                  <---------ARR11(3)                                  <---------MYB52(1)     --------->ATHB12              --------->GLK1(2)      ---------->DOF2 ---------->ID1          <---------AHL20(2)                       --------->ARR11(3) -------->CBF       <---------ANAC58  <---------YAB1    <---------YAB1                --------->RVE1(1) -------GT1         <---------ANAC58*TSS    <----------DOF2                           --------->CCA1(1) -AHL20(2) ----------->GT1<---------ALFIN1  --------->TOE2(3)                       --------->AHL20(2)   tcaattttcaaaggtgttaatttcgtccccatctccgtttctgatactttaattaatactcattgaaaaaatcaattcgaactaaaaaaaatctcgaaag  16634400     --------->ANAC46     --------->ANAC58                                                            <------MYB83     --------->ANAC58                                                      --------->AHL20(2)       <    --------->LBD16                                                        --------->ICU4      <-----   <---------ANAC58                                        <----------DOF2 <---------AHL20(2)  <-----   <---------ANAC58                                        --------------->AGL15 <------MYB46(1)-----   <---------ANAC46                                       <-----------------AGL3--------->MYB59<----- ---------DOF2    <----------DOF2    <---------YAB1       <-----------------AGL2<---------TOE2(3)  <- -->DOF2    <-----------GT1        --------->YAB1     <----------DOF2 ----------->GT1          ------   tctttgcgcgtaattttcttctttattttgttctcactgattattttgcattagctcttttcttttttggggtcgaaaaaattaggtttttttttgggat  16634500                                                                                                -----                     ------>NtERF2                                                            <------           --------->DEAR3(1)                              <---------HSFB2a(2)                <------          --------->ATERF1(1)                              --------->HSFB2a(2)            <---------LBD16          <------NtERF2           <---------MYB52(2)    --------->ARR14(2)              <---------ARR14(2)         ------>NtERF2           <---------At4g35610   <-------GAMYB                    <---------SPL7         <---------ATERF1(1)------->PIF5              <---------DEAR3(2)                --------->ARR14(2) -------GAMYB       <---------DEAR3(1)               <---------DEAR3(1)            --------->ANAC46 ----GLK1(1)        --------->DEAR3(1)     <-------GAMYB<---------ARR14(2)        <---------LBD16<--- ----GLK1(2)------>NtERF2<-----------RAV1(2)<---------WOX13(1)                   --------->MYB52(1) ---->GLK1(2)    --------->DEAR3(1) --------->MYB52(1)<---------MYB46(3)        ----------->HVH21---- ----ARR14(2)  ------>NtERF2<-------PIF5  <---------MYB46(3)                 ------>NtERF2<-------TEIL ----------RAV1(1)------>NtERF2  <------NtERF2    <---------DEAR3(1)    <-----------RAV1(2)  <------- --->ARR14(2) --------->DEAR3(1) --------->At4g35610<------NtERF2   <---------AHL20(2)----------->ARR10   tctgttgatggcgacgacgacgacgacgcaggggcagcaaacggcgattgactcggcggttctcgatgatataatcaggcgactcacggaggtccggtta  16634600          --------->ANAC58          --------->ANAC58                                                      --------->ANAC58        ---------->DOF2       <---------At4g35610                               --------->ANAC58       <------ZmHOX2a(1)      <---------ZAT2                                    -------->P       =====================================HOX2a_HOX2a                       --------->MYB46(3)    <-----------RAV1(2)       --------->At4g35610                            --------->At4g35610 ---->MYB52(2)                --------->ZAT2                                 <---------At4g35610 ---MYB52(1)              ----------->HVH21                          <-----------GT1      <---------ANAC58 --P<---------LBD16 --------->ZAT2               <---------ZAT14 <---------RVE1(1)        <---------ANAC58 ------STY1(2)      <---------At4g35610          --------->ZAT14 <---------CCA1(1)      <-----------GT1 ----->At4g35610    <---------ZAT2   <------ZmHOX2a(2)          --------->ARR11(3)      <---------AHL20(2) --MYB52(1)         --------->At4g35610     --------->At4g35610 <---------ARR11(3)------->GAMYB   gctagaccaggaaagcaagtccagctctctgaagctgagatcaaacagctctgtactacagctagagatattttccttcagcaacccaatttacttgagc  16634700                                                          <---------ANAC58                                                          <---------ANAC58                       --------->ARR14(2)            <---------AHL20(2)                       <-----------ARR10             --------->ATHB51                       <---------ARR11(3)            --------->AHL20(2)                       --------->ARR11(3)            <---------ICU4                 <-----------RAV1(1)                 <--------ATHB1              <---------ARR11(3)                    --------->ICU4              --------->ARR14(2)                  --------->YAB1              --------->GLK1(2)                  <---------YAB1                                  <---              <---------ARR14(2)                --------->AHL20(2)               <---------YAB1  <---          --------->YAB1<----------TaMYB80      <---------AHL20(2)         <---------TOE2(3)     ----  --------->ATERF1(1)  <---------ARR14(2) <---------MYB52(1)               <---------TOE1(3)<--------   ttgaggctcccatcaaaatctgtggtatcttcccaatttgattcgttgattttaataatttcgtcggaattgattttagggttcttattgtgtttcttag  16634800  Previous    Next  AGI:  At2g39840.1    Description:  TOPP4 (Type one serine/threonine protein phosphatase 4); protein serine/threonine phosphatase. Identical to Serine/threonine-protein phosphatase PP1 isozyme 4 (TOPP4) [Arabidopsis Thaliana] (GB:P48484;GB:Q147H5); similar to TOPP2 (Type one serine/threonine protein phosphatase 2), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G59160.3); similar to TOPP2 (Type one serine/threonine protein phosphatase 2), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G59160.2); similar to TOPP2 (Type one serine/threonine protein phosphatase 2), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G59 Range:  from: 16634336    to: 16636367    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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