AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
-------->P ----DOF2 ------->GAMYB
tccgtttgcgtttataatgctgcaaacgcaactaccaattaggcctgaatgataatctgctatcatggtcttgaaactactcgcaaaccaaacattgaat	15731700
-------- <-------- <------NtERF2 ------->GAMYB -------- ---------->DOF2 <-----------------------TaNAC69(2) ----------->GT1 ------>NtERF2 ------>NtERF2
tatgttttgtgagagaaattgaaataaagatggaaatgtagagaatacttgtcgaagtagaaggcgaacggagccataacaacggtggcaactccgtgac	15731800
---------->DOF2 --->HVH21 ---HVH21 <------ZmHOX2a(1) <-----------GT1 ----------->RAV1(1) --->TGA1 ----------->GT1 <----------DOF2 ------>ZmHOX2a(1) ------>ZmHOX2a(1) -------------
ggtagacggaaagaacgtaaatgctcatgcctttgtttaggacatcctttgtaagaatatccattcctgcataccctatttgcaacaataccattaaaat	15731900
<------ZmHOX2a(1) ----------->GT1 <------ZmHOX2a(2) ---------->DOF2 -->AGL15 =================HOX2a_HOX2a <------ZmHOX2a(1)
gaatggtagtgccttcttcatacatgccatctctgcaagatcatttagaggatttcaacaaaaaaatagaggaaagaggctgaaaataatcgatggaaga	15732000
---------->DOF2 ----------->GT1 ---------->DOF2 ----------->GT1 ----------->GT1
gataagggggagagagaaagaaaaaaaagtaagtggaaacattagaaaaaaaaaattcaatggcacaaatagtaaataaacaaagattttgagagttaga	15732100
------>ZmHOX2a(1) ----------->GT1 *TSS <------------CBF ================================ <-----------RAV1(1) <-----------GT1 --------------->AGL15
aaatcttctacatagtgttgcacagtaaaacatgcctattttctaatttaaatattgaaactgcccaaattcctaattaagttttaagaaaacagtctat	15732200
--------------->AGL15 - =========================MADS_MADS ------------>CBF <----------DOF2 --
tttgaaaatttcccaaatatattattatcacataatatgtcaatatgtgtgtaattttgtattatttgtttgttatatactttgaggcaagatgccaaat	15732300
----------->RAV1(2) ------->P ---->ZmHOX2a(1) <-----------GT1 ------->TEIL <-----------GT1 <-
cctacctgaaatgctagtgctgtggactcacctatttaacttgacctaagtcgaacgcacgttgtatcaatattctctcattttctctatctaactagta	15732400
<-----------HVH21 <------NtERF2 ------>NtERF2 ---------->DOF2 < ----------GT1 ---------->DOF2 -----
gtaacgttatggaagtaaacagttggttcttaatagcacaagtacttcgtttgtccgtctgtagaacaaaaggcgacgatgtcagaagaaacttagatgt	15732500
----------->RAV1(1) ------->TEIL <-----------GT1 --------------->AtSPL8 ----------->ARR10 ----------DOF2 <------ZmHOX2a(1) ------>HVH21 ----------->HVH21 <----------ID1 <---
gactttgtacccacaaaaaaaaaaaacagatgtgacagaaatatttaagaggacaagattttcacgtttttctaaagattctcgatcgacccgaaacaat	15732600

AGI:	At2g37450.1
Description:	nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT2G37460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18107.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620)
Range:	from: 15729647	to: 15732141	Orientation: Reverse
Links:	TAIR MIPS

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