Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ----------->GT1                                                    --------->ANAC58                                                    --------->ANAC58                                                    --------->ANAC46                                                 --------->ZAT14                                                 <---------SPL7                                                 <---------ZAT14                                                --------->ALFIN1                                               <---------------AtSPL8                                               <---------------AtSPL3                                              <---------ANAC58                                              <---------ANAC46                     <---------ANAC58                                              <---------ANAC58                     <---------ANAC58                                    --------->DAG2 <---------LBD16    ------>ZmHOX2a(2)                                   ---------->DOF2 --------->SPL7   --------->ARR14(2)                             ---------->DOF2<------MYB46(1) <---------ICU4   <---------ANAC58           ---------->DOF2 --------->ANAC58 <------MYB83    -------->ATHB1=========================== ------>TOE2(3)            --------->ANAC58<---------MYB46(3)       <---------ARR14(2) ------>TOE1(3)            --------->ANAC46<---------AtMYB61--------->ATHB12 <---------ANAC58 ----------TaNAC69(2)  --------->CCA1(2)--------->ATHB12   <---------YAB1 <----------DOF2   ccctaacaagtccgaaagttagaagaaacacgaaagagaaagcgattggtgtgtacggaaaatcattggggatcgtctttcttgggcttgcgatagttct  15030200       <---------ANAC58       <---------ANAC58    <-------MYC3    <-------MYC2    ------->MYC3    <-------PIF5                         --------->HSFB2a(2)    ------->MYC2               <------MYB46(1)    ------->MYC4               <------MYB83    ------->PIF5               <---------MYB46(3)    ------->PIF4           <-----------RAV1(1)    <-------MYC4          <---------MYB52(1)--------->ARR14(2)    <-------PIF4------>NtERF2<--------P  <---------HSFB2a(2)                  --------->ANAC46   <---------TGA1a      <---------DEAR3(1)--------->LBD16                     --------->ANAC58   ===================================MYC_MYB         <---------HSFB2a(1)     --------->ANAC58   --------->O2----------->HVH21        <---------LBD16                    --------->ZAT18   --------->TGA1a<---------bZIP60(2)  --------->MYB52(1)                  --------->ZAT14   <---------O2--------->DEAR3(1)   --------->At4g35610                    <---------ZAT18 <------------OsbHLH66 <---------ORA47(1)<---------ANAC46        <---------ANAC58 <---------ALFIN1 <---------O2<---------AtMYB61       --------->HSFB2a(1)  <-------TEIL            <- --------------------->WRI1--------->ALFIN1 <---------ARR14(2)   <---------ANAC58               <---- ============bZIP_DOF ------>NtERF2 <---------At4g35610       <---------AGP1<---------ALFIN1------>ZmHOX2a(2)   cttccacgtgcttagcgacgacgaggccggtgttggtgagcttccggatattgggaacgttgtagttctgtgccaagtacaccccaaaaactgatcccgt  15030300                        <-----------GT1                      --------->KAN4(2)                                                          ----                     --------->KAN4(1)                                                          -----                     <---------KAN4(1)                                                          -----            <---------At4g35610                                                                 -----            --------->HSFC1(2)                                                                 <-----            --------->At4g35610                                                               ------>ZmHOX2a(1)            <---------HSFC1(2)                                                               <------- ---------->DOF2     <----------TaMYB80     <----------DOF2                                ------>ZmHOX2a(1) --------YAB1<---------GLK1(2)  ------>ZmHOX2a(1)                                     --------->GLK1(1) -----MYB52(1) --------->At4g35610   ------>ZmHOX2a(2)                                <---------GLK1(1)   tatgaaagagaagcagcttctgaatattcccatcctcgatctctctctttctctctctgtctctgtctctgtctctctgcaacttcagaactcctcctcc  15030400                                                                        <---------MYB52(1)                                                                      <---------ANAC46                                                                     <------NtERF2                                                                    ------>NtERF2                                                                   --------->DEAR3(1)                                                                   <---------DEAR3(1)                                                                 <---------ATERF1(1)                                                                ----------->HVH21                                                           --------->ARR14(2)           <---------WRKY38(1)                             <---------ARR14(2)                      -- ----->LBD16              ---------->DOF2                  --------->ARR11(3)                  ------ ---->ANAC58      ------->GAMYB                 <---------AHL20(2)--------->ATERF1(1) <---------WOX13(1) ---->ANAC58   ----------->RAV1(1)     <---------LBD16     <---------ARR11(3)        <------------CBF ---->ANAC46  --------->MYB46(3)  <---------GLK1(2)      --------->HSFB2a(1)        --------->ATHB12- ----LBD16 <---------WRKY12       --------->ARR14(2)     ----------->ARR10         <---------YAB1  <- --ALFIN1 --------->WRKY18(1)     <---------ARR14(2)     <---------HSFB2a(1)  <---------ZAT18  <-----   gcaagttttcaggtcaacaacagagacagaaagacgaattctcagggtttttatttgggaagttctgcgacgccgtttagtactcttgattgggcttata  15030500       --------->YAB1           --------->YAB1       <---------ICU4          <---------YAB1      --------->ICU4          --------->AHL20(2)      <---------YAB1          --------->AHL20(1)    --------->YAB1            <---------AHL20(2)   <---------AHL20(2)         <---------AHL20(1) ------->AHL20(2)            --------->YAB1 --->AHL20(2)               <---------YAB1 -------->AHL20(2)       --------->AHL20(2)                                            --------->TOE2(3) --------AHL20(2)      <----------DOF2             <---------At4g35610           --------->ANAC46 ----YAB1           ------>NtERF2     <------------CBF   <<<<<<<<<TBF1          --------->LBD16   aataaataataataactaatgaggccttttattataatagaattgcattttgtagcttcttcttctcagaactcagaaattccccaaaacataaatactt  15030600                                      *TSS                          <XXXXXXXXXXXXXXXXXXXXMIR3440B-3P                                    <---------YAB1                  --------->ARR14(1)                                <---------ARR14(2)                  --------->GLK1(2)                                --------->ARR14(2)                 <---------ARR14(2)                                <---------GLK1(2)                  <---------GLK1(2)                             <---------ANAC58                      --------->ARR11(3)                             <---------ANAC58                      --------->ARR14(2)                             <---------ANAC46                      <---------ARR11(3)               --------->MYB52(1)--------->GLK1(2)       <----------DOF2           ----------------->AG<------NtERF2     <----------DOF2 <---------YAB1  <----------DOF2           <---------LBD16  ---------->ID1      ----------->ARR10                  <   ctctctttctcttaccaaaacggcgaaaatggcggattctgatttttgtctctttttttctttgatgaagattctcttgatcaattcatggctatcgaaa  15030700              --------->GLK1(2)                    <----------DOF2                               <---              --------->ARR11(3)                  <---------ANAC58                              <----              <---------ARR14(2)                  <---------ANAC58                              -----              --------->ARR14(2)            <---------AHL20(2)                                -------             --------->RVE1(1)              <---------YAB1                        <---------ANAC46          --------->YAB1                  <---------ICU4                          <---------ANAC58 ---------GLK1(2)                        --------->ICU4    <-----------GT1        <---------ANAC58   ctgattctgccataaaaatctggacaggtctctctcagttctaatttttattgctttgtttttgccattccatttgatgagattgtgtgtgtgtttggcg  15030800                           <---------ANAC46                                                   <------                      <---------ATHB12                                                        <------            --------->ANAC46                                                        <---------TOE1(3)            --------->ANAC58           ------>ZmHOX2a(1)                            <---------TOE2(3) ---NtERF2  --------->ANAC58          --------->TOE2(3)                           ---------->DOF2 <-- -----At4g35610       <-----------RAV1(1)                                        --------->AHL20(2) ---->At4g35610--------->WOX13(1)  --------->ARR14(2)   <-----------GT1          <---------AHL20(2) --->ID1   --------->WOX13(1)      --------->GLK1(2) <---------ZAT6      --------->GLK1(1) --------->ZAT6   ctgtcaatttcatcaagcaatccaatgttgctcatagaatccttattttgtatttgtgttaccactcttatggagaaatcaaattaaaggttaacacttt  15030900                                                                                     ------>ZmHOX2a(2)                                                                                   <---------AGP1                                                                             <-------TEIL                                                                             ------>ZmHOX2a(2)                                 <-----------GT1                            <------ZmHOX2a(2)                              <----------DOF2                               --------->ARR14(1)                              --------->TOE1(3)                            <---------ARR11(3)                   --------->AHL20(1)                                      --------->ARR11(3)                   <---------ARR11(3)                                      --------->ARR14(2)                   <-----------ARR10                      --------->ANAC46 <---------ARR14(2)                   --------->ARR11(3)              <-------TEIL           <---------GLK1(1) <----------DOF2  --------->CCA1(1)         <-----------GT1   --------->ANAC58   --------->WRKY12 ---DAG2--------->ZAT6        --------->TOE2(3)<---------YAB1 --------->ANAC58  <---------MYB52(1) ----DOF2         --------->RVE1(1)   <----------DOF2  --------->ARR14(2) <---------HSFB2a(1) ------- ---------GT1 ------>ZmHOX2a(1)--------->DOF5.7(2)<-----------------AGL1 ----------->ARR10    <------   atactttctatcactcctaaatatcttatcaactttaactcttttttttctgattcatataggcaagcatggaagaagatccgttgatctgtgttgatgt  15031000            --------->ZAT14            <---------ZAT14  <---------YAB1                         --------->ARR14(2)                                     <---- -->bZIP60(1)                    <---------At4g35610         <----------DOF2----------->GT1<--------- ---bZIP60(1) <----------DOF2    --------->At4g35610   <-----------GT1 ---------->DOF2---------->ID1   catcaagattccactgctctactgtgcaactcttaagctgcaaaatatgctaacttgaaacctctttgctctcaaaagaggtaaatttgtctcctttgtg  15031100  Previous    Next  AGI:  At2g35736.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25225.1); similar to unknown [Picea sitchensis] (GB:ABK20880.1) Range:  from: 15030163    to: 15030333    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35738.1    Description:  other RNA Range:  from: 15030638    to: 15032544    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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