Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ALFIN1     --------->ANAC46 ------TOE2(3)                                                     --------->YAB1 ------TOE1(3)                                              ------->MYC3 ----AHL20(2)                                               <-------MYC3    ------->MYC3 -->AHL20(2)                                               ----------->GT1  <-------MYC3 -->AHL20(1)                                         ---------->DOF2     <---------ALFIN1   --------- ---AHL20(2)          <----------DOF2         <---------TOE2(3)   <---------ATHB12          <-------- ---AHL20(1)    ----------->HVH21             ----------->GT1     --------->ICU4            ---------   atgttagccacaacttgagcgacgcttttgtcaatgcattgcgaaattaagttaaaaaagcatgtgaaatcatcaacacgttttcatctataagtgaaca  13916100                                                               <---------ANAC55(2)                                                         --------->YAB1                               <---------AHL20(2)       <---------YAB1                               --------->AHL20(2)     --------->YAB1                       <---------ZAT14                <---------ICU4                       --------->ZAT14            <---------YAB1  ------->TEIL                      <----------DOF2     --------->WOX13(1)   --------->ANAC55(2)       ---------->DOF2                      <---------DAG2 <---------YAB1  <---------YAB1              ---------->DOF2 >ZAT18         ----------->HVH21 --------->GLK1(2)  --------->ICU4       --------->ARR11(3) -ZAT18  --------->TOE2(3)    --------->YAB1<---------ATHB12  <-------TEIL<---------ARR11(3)    ----- >ZAT14  --------->TOE1(3)<---------YAB1<---------WOX13(1) --------->CCA1(2)------>ZmHOX2a(2) -------   caaaatagaaaccttgaaatgacactttactattaaaatctgattaatcaatgtgattatgatatacgtatatagtgatcttaaaaagagagaaagaagt  13916200                                                                                         ----------->GT1                                           <----------DOF2                               --------->YAB1                                     <---------AtMYB61                               --------->ATHB12                                   <----------DOF2                                  <---------YAB1        ----------->GT1         ------>MYB83             <------MYB46(1)       <---------AHL20(2)   ---------->DOF2            <---------MYB59            <------MYB83         <---------AHL20(2) ---->YAB1              <---------ICU4     ------>ZmHOX2a(1)     <------ZmHOX2a(1) <-----------HVH21 ---->GT1          ------->TEIL ------>MYB46(1)         --------->MYB59       --------->AHL20(2)  <--   ataacaaaagctgtatatatgtatatttatgacctagctttggtcctttggaagtaatttggttataggatgtctaaaaattaaatgtcattggtaatat  13916300           <---------YAB1         --------->YAB1         <---------ICU4         --------->ATHB12         <--------ATHB1         -------->ATHB1         --------->ATHB51        --------->ICU4                                                                        -------        <---------ATHB12                                                                      <------        <---------ATHB51               <---------RAP2.6(2)                                    <------        <---------YAB1                --------->RAP2.6(3)                                     -------        <<<<<<<<<<AGL22               <---------At5g28300                        --------->YAB1        <<<<<<<<<<AGL20     <---------YAB1                                   --------------->AGL15        <<<<<<<<<<AGL24     --------->ICU4                          <---------ZAT6---------->DOF2 ---------HVH21  <---------YAB1      --------->MYB52(1)      ---------->DOF2 ========================   tgtcagaccaattattgttatcatgtagtcatttttgagttacggccaaaatatgaaattatagaaagtagtcttcattccactaatagccgagagagct  13916400                                                                                                    *TSS                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                -----                                                                                                -----                                                                                                -----       <---------ANAC55(2)                                                                     ------       --------->ANAC55(2)      ------->GAMYB                                          --------->WOX13(1) -->ZAT2                     --------->MYB52(1)                                       <---------AHL20(2) ---At4g35610           --------->At4g35610     <----------DOF2        ---------->DOF2--------->AHL20(2) ---ZAT2  ------->TEIL  --------->GLK1(1)     <---------At4g35610   <---------YAB1   --------->AHL20(2) -->At4g35610--------------->AGL15----------->GT1          --------->ARR14(2)----------->GT1   <----- ============================MADS_MADS --------->ICU4<---------REM1(2)<---------AHL20(2)  --------->YAB1   ggtttgattatgtaacttctaagagcatctccaacggtgtaaaaatggagctttcttcacggtttctcttattaaaagttggaaaaaataaatcagaatg  13916500                                                                 <---------ANAC55(2)                                                                 --------->ANAC55(2)                                                               <-----------GT1                                                             ------->TEIL                                                          <---------bZIP60(2) ---------AHL20(2)                                        <---------ANAC58 --------AHL20(2)                        <------MYB83     <---------ANAC55(1) ------->AHL20(2)                   <---------HSFB2a(2)   --------->ANAC55(2) -------WOX13(1)                 --------->GLK1(2)        <---------ANAC46 ------>GT1             ----------->HVH21<------MYB46(1)  <---------ANAC58 ---->ATHB12 <---------At4g35610--------->ARR11(3)        <---------ANAC55(2) ---->YAB1   --------->ZAT2     <---------GLK1(2)        ----------->STF1 --->ICU4    <---------ZAT2    <---------RVE1(1)        <---------TGA2(2) ----YAB1    --------->At4g35610<---------ARR11(3)     ----------->TGA1    --------->ANAC46   -------   attaatttttgagagagctgtctctcttgacagagattttggaaggtaagagagacgatgacgtatcacgtttttagacgagactatggcgatggagagt  13916600                                 <---------ARR11(1)                                 <---------ARR11(3)                      --------->ANAC46                      =========================bZIP_DOF                      --------->TGA1a                                                               -               --------->GLK1(1) ------->TEIL                                                       <       <---------DAG2 --------->ANAC58                                      <---------ANAC58       <-       =========================bZIP_DOF                        --------->ATHB12                   <-       <----------DOF2--------->ANAC58  <----------DOF2        <---------YAB1             -----------      <---------DAG2  --------->O2  <----------DOF2            --------->ICU4           <---------TOE2(3)   <-----------GT1    ==================================================bZIP_DOF        <---------ANAC46 ---->GT1      <---------GLK1(1)<---------CCA1(2)            ---------->DOF2<---------ANAC58       --   gaattttgcctttttggaattcccacgactctctgtatctttctttaggcgagactatggcgataaagattgaattttgcttcgacaattgagggtgaaa  13916700                                                    --------->At4g35610                                                    <---------ZAT2                                                    <---------At4g35610                                                 <---------MYB52(1)                                                <-----------HVH21                            <-------                                                <-----------TGA1                             --------                                              <-------TEIL                                  <--------                                            <---------GLK1(2)                               ---------   --------->At5g28300                      <---------ARR14(2)                      ------>MYB83  ------->GAMYB                        --------->LBD16                              ------>MYB46(1) -------->RAP2.6(3)                    <---------At4g35610                        <---------MYB59 ---------At5g28300                    --------->At4g35610                        <---------MYB111(1) ----------GT1                     <---------ARR14(2)       --------->MYB46(3)   --------->ANAC46 --------DOF5.7(2)                 --------->ARR14(2)<---------GLK1(2)           --------->ANAC55(2) >GT1                             ----------------------->TaNAC69(2)          <-------TEIL----------- ------->MYB52(1)        ----------->HVH21  --------->ARR14(2)  <---------DEAR3(1)<---------MYB46(2)   ttaacggcaaattcaaaatttcggtttctgacaagtcgttccgctggattcgtcagcttctcaccatcggcgaagcgaggttcacctaatcggagatttg  13916800                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                          <------MYB46(1)                                                                                          <------MYB83                                                                                      --------->STY1(2)                                                                                      <---------STY1(2)                                                                                      --------->ZAT2      <---------ZAT2                                                                  <---------ZAT2      --------->ZAT2                                          --------->ANAC58       --------->ANAC58 --GLK1(1)                             ----------->HVH21      --------->ANAC58       --------->ANAC58 ->CCA1(2)                    --------->ANAC58                --------->ANAC46--------->ANAC46 ------ -ARR14(2)                    --------->ANAC58           --------->ZAT14     --------->MYB46(3)<----- >ARR14(2)                <------ZmHOX2a(1)          <-----------GT1     <---------SPL7  --------->MYB59 >ARR10 <<<<<<<<<<AtWER <---------ANAC46          <---------CCA1(2)   --------------------->WRI1<----   cgactcccagttggagagtaatcgttgaggagaggcaacgagtgacacgagcatatcacttctctcgccattcttcgtacccatcgcaagctaggtctcg  13916900                                                                                                   <-                                                                                                   <-    <---------At4g35610                                                                            -- -------HVH21       <-----------RAV1(2)                                                            -- ----O2    <---------ANAC58                                                                   <------ZmHOX2a(2) --->TGA1a <---------ANAC58                                                            --------->ATHB12 --->O2  <---------YAB1                         --------->TOE2(3)                      -------->ATHB1 --->bZIP60(1)   --------->At4g35610            --------->TOE1(3)                      <---------ICU4 ----TGA1a--------->ATHB12                  <---------WRKY38(1)                        --------->YAB1 --->bZIP60(2)   <---------At4g35610       --------->WRKY18(1)                        <---------YAB1 ----bZIP60(1)   ------>NtERF2         <--------P            --------->ARR14(2)       <---------ATHB12 -------TGA1 --------->ALFIN1      <-----------RAV1(2)       <---------ARR14(2)       --------->ICU4   tcactaagctcatgagtgccgctcaggctgctatggaacaggttagtcaacctttaaacttcgtatttgtttgcattcaataagcctaatcattggatca  13917000  Previous    Next  AGI:  At2g32795.1    Description:  other RNA Range:  from: 13916500    to: 13917987    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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