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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
-------
<---------
ICU4
--------->
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<--------
HAHB4
-------->
HAHB4
--------->
ATHB51
--------->
YAB1
<--------
ATHB1
<---------
ICU4
--------->
ICU4
--------->
AHL20(2)
<---------
ATHB51
<---------
YAB1
--------->
YAB1
<-------
<---------
AHL20(2)
<---------
YAB1
--------
<---------
ZAT6
--------->
YAB1
--------->
AHL20(2)
<---------
ANAC58
--------->
ICU4
<---------
AHL20(1)
<---------
ANAC58
<---------
YAB1
--------->
ATHB12
--------->
AHL20(1)
-------->
YAB1
<---------
AtLEC2
<-------
TEIL
<------
ZmHOX2a(2)
--------->
YAB1
<---------
ATHB51
agtcataacatatgcgtttacatgaatagtgtgatgattcattcataaacattggatcaaacacaaatgaaattagaaatataataattaaaataattaa
10776600
<---------------
AtSPL3
--------------->
AtSPL8
<---------------
AtSPL8
<-------
GAMYB
<---------
MYB46(3)
--------->
KAN4(1)
<-----------------
AGL3
--------->
MYB55(2)
<---------
YAB1
------>
ZmHOX2a(2)
<------
MYB83
<---------
GLK1(2)
--------->
ARR11(3)
<----------
DOF2
<------
MYB46(1)
<---------
WRKY12
--------->
ICU4
<---------
ARR11(3)
<---------
YAB1
--------->
ALFIN1
<---------
WRKY38(1)
<--
---
AHL20(2)
--------->
AHL20(2)
<---------
AtMYB61
<---------
ARR11(3)
--------->
ANAC58
-->
AHL20(2)
<---------
ATHB51
<---------
ANAC58
--------->
ARR11(3)
--------->
ANAC55(2)
--
YAB1
--------->
GLK1(1)
<---------
ANAC46
--------->
AHL20(1)
--------->
ANAC46
->
ICU4
<---------
GLK1(1)
<---------
ANAC58
--------->
AHL20(2)
--------->
ANAC58
tatgatctacaattggatatcaaattattctttatcaatttgggtggttgtacatattttcaaatatatacagtcaaagattattcaagtaatatttcat
10776700
<---------
GLK1(2)
<--------
ATHB1
--------->
YAB1
<---------
ZAT14
--------->
ICU4
<---------
ARR14(2)
<---------
ATHB12
--------->
ARR14(2)
<-----------
GT1
--------->
ZAT14
<---------
AHL20(1)
<---------
ZAT18
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(1)
<---------
ARR11(3)
--------->
YAB1
------------>
CBF
<---------
AHL20(1)
<---------
ANAC46
<-----------
TBP
--------
DOF2
<---------
YAB1
--------->
AHL20(2)
<----------
DOF2
--------->
ARR11(3)
<-
cttttatagttattttattattcaatgattctcaaatatatatcacctttgaagcattttctttagtgtattcaaagatttatatagtatactcattcaa
10776800
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
ARR14(2)
<---------
AHL20(2)
<--------
P
<---
--------->
YAB1
--------->
MYB59
<-----------
TBP
------------>
CBF
--------->
AHL20(1)
<------
MYB83
----------->
GT1
<----------
DOF2
----------
RAV1(1)
<---------
AHL20(1)
<------
MYB46(1)
------->
TEIL
<-------
TEIL
----
tttgttgccaaaatacaatcacattctaatatattttccaacaaatttggtagatttgaatatgaatttttgtaaatatacatgacttttatattttagt
10776900
--------->
CCA1(2)
----------->
GT1
--------->
AHL20(1)
<------
ZmHOX2a(1)
--------->
ARR11(3)
----------->
TBP
<---------
AHL20(1)
<-----------
TBP
<---------
ARR11(3)
<---------------
AGL15
--------->
ANAC58
<-------
--------------->
AGL15
--------->
ANAC58
---------
<---------
ANAC58
<-----------
GT1
--------->
AHL20(2)
<---------
ANAC46
<-------
TEIL
--------->
YAB1
<---------
ANAC58
--------->
CCA1(2)
--------->
ANAC58
------
ARR14(2)
<---------
GLK1(2)
--------->
ANAC58
----->
ARR14(2)
--------->
AHL20(2)
---------->
DOF2
<-----------
GT1
<--------
atttgcttatataaggagtttaaatctcttgaactactccaaaaacattcaaactaaaaagattcacaagatattagtaataccactcaaataatatttt
10777000
-------->
ATHB1
<---------
ICU4
--------->
ATHB12
<------
ZmHOX2a(2)
--------->
ATHB12
-
--------->
ARR14(3)
--------->
YAB1
--------->
YAB1
<-
<---------
ARR11(3)
<---------
YAB1
<---------
ATHB12
<
<---------
ARR14(3)
=======================================
bZIP_DOF
<----
--------->
ANAC58
--------->
ARR11(3)
<----------
DOF2
<---------
ZAT2
<----
--------->
ANAC58
--------->
AGP1
<---------
YAB1
<---------
ATHB12
--------->
TGA1a
<-------
--
YAB1
<---------
ARR14(2)
<---------
ZAT14
<---------
TGA1a
--------
>
AHL20(1)
--------->
ARR14(2)
--------->
ZAT14
--------->
ZAT2
--------
-
AHL20(1)
------->
TEIL
------>
ZmHOX2a(2)
<---------
ZAT18
<-----------
RAV1(2)
<-------
tgaaacaagaa
atggatgttcaaagatcttcatacattttcattgcactttctatcattgcaatgttcttgatcacag
gtgagtcaatgatacaaaatat
10777100
-------->
ATHB1
--------->
ATHB51
<-------
TEIL
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ATHB51
-------->
AHL20(2)
--------->
CCA1(2)
--------
YAB1
<---------
YAB1
---------
AHL20(2)
--------->
CCA1(2)
-----
AHL20(2)
<---------
ARR11(3)
-----
YAB1
--------->
ARR14(2)
<----------
DOF2
--
ARR11(3)
<---------
ARR14(2)
----------->
GT1
--------->
KAN4(2)
->
AHL20(1)
<------
ZmHOX2a(1)
---------->
DOF2
<---------
KAN4(1)
->
AHL20(2)
--------->
YAB1
--------->
ICU4
------->
TEIL
--------
--
AHL20(1)
<---------
LBD16
<---------
YAB1
<---------
YAB1
<----------
DOF2
tattaaatgcatatagttatcaggatatgatatacaattattcaaagttaaaagtttggaagaacataatgaatgttctttgattctttttcttcccaca
10777200
<---------
ANAC58
<---------
ANAC58
<---------
ICU4
--------->
YAB1
<---------
YAB1
<---------
ANAC46
--------->
WOX13(1)
<------
MYB46(1)
--------->
AHL20(2)
<---------
TOE2(3)
------->
MYC3
<---------
YAB1
<------
MYB83
--------->
AHL20(1)
<---------
DAG2
<---------
AHL20(2)
--------->
YAB1
<---------
ANAC58
<---------
AHL20(2)
<----------
DOF2
<---------
ICU4
<-----------
GT1
<---------
ANAC58
--------->
AHL20(2)
<---------
ZAT18
--------->
AHL20(2)
<---------
ZAT14
<---------
YAB1
--->
RAV1(1)
<----------
DOF2
<---------
LBD16
<-------
MYC3
--------->
ZAT14
--------->
ARR14(2)
aaaaaaaaattattctttcttgctcacttttacggataactatttattacacatgttaatcacttcacacttatgataactatatatgcttggtttttgg
10777300
--------->
ZAT18
--------->
ALFIN1
----------->
GT1
<------
ZmHOX2a(1)
<-----------
GT1
<---------
LBD16
--------->
AHL20(1)
<-----------
RAV1(2)
<---------
AHL20(1)
--------->
HSFB2a(2)
<---------
AHL20(2)
<---------
HSFB2a(2)
<-----------
GT1
--------->
AHL20(2)
<---------
RVE1(1)
<---------
ZAT2
--------->
YAB1
<------
ZmHOX2a(1)
<---------
CCA1(1)
--------->
ZAT2
<-------
--------->
YAB1
<---------
ICU4
<---------
ARR11(3)
<XXXXXXXXXXXXXXXXXXXX
MIR869.1
<---------
YAB1
--------->
AHL20(2)
--------->
ARR11(3)
--------->
AtLEC2
----------->
HVH21
tttatgataaacataaaatatttacag
gagtaaaaccagaggtaagagatatttgtccaggagtgtgccatgctggaattgaaccagactgtgacacact
10777400
---
<-----------
GT1
---
--------->
AHL20(2)
<--------
ATHB1
<--
<---------
ICU4
---
<---------
ATHB51
<--
--------->
AHL20(2)
---
<---------
ATHB12
<--
--------->
ICU4
<---
------>
ZmHOX2a(1)
<---
------>
ZmHOX2a(1)
<---------
AHL20(2)
<
<-------
GAMYB
<---------
ARR14(2)
<--------
HAHB4
----
<---------
LBD16
<---------
ARR11(3)
--------->
YAB1
<------
<-----------
RAV1(1)
--------->
ARR14(2)
--------->
ATHB51
-------
<---------
ZAT14
--------->
ANAC58
--------->
TOE2(3)
<-------
<----------
DOF2
<-----------
GT1
------->
GAMYB
--------->
ARR14(2)
--------
--
ALFIN1
<---------
ANAC46
<---------
TOE2(3)
--------->
ANAC58
<---------
ARR14(2)
<-------
ctgcattagcatggggtttactgggggttattgtcaaggattaacatgttgttgcaacccaaaatcctccaaatcctcaataattaatcgtccaatttaa
10777500
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AGI:
At2g25295.1
Description:
LCR81 (Low-molecular-weight cysteine-rich 81). Identical to Putative low-molecular-weight cysteine-rich protein LCR81 precursor (LCR81) [Arabidopsis Thaliana] (GB:P82790); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20070.1); contains InterPro domain Knottin; (InterPro:IPR003614)
Range:
from: 10777012
to: 10777500
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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