AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<-----------ARR10 --------->ALFIN1 ---------->DOF2 >GT1 ---------->DOF2 ---------->DOF2 ------->TEIL
atgagagtgcgggaaagtgttaactactacaacttatatctagttttttatttgaaaagaaaagaatctcaccgagctagagctagatgaacttccagac	9213800
------ ====== ====== ====== <------NtERF2 --------->ALFIN1 ====== --------->ALFIN1 <-------GAMYB <-----------HVH21 <------NtERF2 ----------->HVH21 --------->ALFIN1 <-----------RAV1(1)<------NtERF2 ---------->DOF2 ------>NtERF2 ------>ZmHOX2a(1) ------>NtERF2 ----------->ARR10 <-----------RAV1(1)<--------P ----------->RAV1(2)--------->ALFIN1
cgacgaagatgctcttcaagcgacccatggtgttgctgccctgtggtggttgctccagtaccagcagagactcctgtcgcagtggcagcggtggcagcac	9213900
------>NtERF2 <-----------RAV1(2) ----------->RAV1(2) <-----------RAV1(2) <---------ALFIN1 =======================RAV ----------->RAV1(1) ================RAV =========================RAV ----->RAV1(1)----------->RAV1(2) ================RAV -------- ==============RAV --------->ALFIN1 =========================RAV <-----------HVH21 <------ZmHOX2a(1) =======================RAV ------->GAMYB <-----------RAV1(1) ------>ZmHOX2a(1)
cagcaccagctggagcagctgccggatgtgtttctccaacggtgctagtagggtgctctgcaatgtcgctggtagtactctccttatgctgaggagtgga	9214000
<-------TEIL - <--------P ------>ZmHOX2a(2) <---------ALFIN1 <-------GAMYB <-------GAMYB ---- ->ALFIN1 <-----------HVH21 <-----------HVH21 <-----------HVH21 <-------
gctaacaacaccggttaggtacatggggttaccgtgctcatcagtcaggtcgacaattgggtttccctgtgtgtcagttagatggatcggattacctttt	9214100
--------->ID1 ----------->AtSPL8 <----------DOF2 <----------DOF2 ---DOF2 ------>NtERF2 <-----------GT1 ------>ZmHOX2a(2) <-----------GT1 <----------DOF2
tcgtccctcaaatccgccattatattattaccttttagcttctgatctgttttgtgtgtgagatatataccctttcaaatacagctttgaagaaaacttg	9214200
--------->O2 <---------TGA1a --------->TGA1a <---------O2 <-----------TBP <---------AtLEC2 <------NtERF2 *TSS --------->AtLEC2 ----------->GT1 <-------TEIL --------->AtLEC2
gtttgggattgattcaagtaggcatgcatatatattagacatgttaatctgcatggatatgatacgtggcgtatttaatgtgaaatgtttgccacgcacg	9214300
<----------DOF2 ----------------------->TaNAC69(2) ------->TEIL --------->TGA1a --------->O2 <-----------HVH21 <---------TGA1a ------->TEIL ----------->RAV1(1) <----------DOF2 <---------O2 <---------------AtSPL3 <-----------GT1 ====================bZIP_DOF ------->TEIL <-----------GT1 <-------TEIL <-----------HVH21 <---------------AtSPL8 ----------->GT1 ----------------->AGL1
gatagaattagagttccatgtgtcatgtgtgtactttgaaatgtgtacgtcacgaatccgacatagtaataacgttttgccttttttgatagattcggta	9214400
--------->AtLEC2 --------->ABI4(2) <---------------AtSPL8 <---------AtLEC2 ---------->DOF2 <----------DOF2 <----------DOF2 ----------->ARR10
gataacgttatcttttaagtacggtgctttctatgttccatggacacatgtggatttgatcagggcttagaaccgctaaagaaggtcggtgttccgagtt	9214500
----------->GT1 <--------P <-----------RAV1(1)---------->DOF2 ------->TEIL <-----
ttaaattcttgacgtattctgattggtaagtgcaagtttgtgttggtaactaatttcataaagcactaaacaaacgaaccatggaagttaacgttggatc	9214600
<---------ALFIN1 <------ZmHOX2a(2) <-----------GT1 -ZmHOX2a(2) <<<<<<<<<RAP2.2 ----------->GT1 <---------ALFIN1
ataatacaaatctgtttagattggttttgaactgaaacatttgtttagaaatggtttgtagaagtatataaaaatcgtataatacgatcccacaccaaat	9214700

AGI:	At2g21490.1
Description:	LEA (DEHYDRIN LEA). Identical to Probable dehydrin LEA (LEA) [Arabidopsis Thaliana] (GB:Q96261;GB:Q42254;GB:Q8L9Q5); similar to dehydrin family protein [Arabidopsis thaliana] (TAIR:AT4G39130.1); similar to Late embryogenesis abundant protein (Protein LEA) (GB:P21298); contains InterPro domain Dehydrin; (InterPro:IPR000167)
Range:	from: 9213096	to: 9214205	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At2g21500.1
Description:	protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G39140.5); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G39140.3); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G39140.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO47581.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)
Range:	from: 9214629	to: 9217311	Orientation: Reverse
Links:	TAIR MIPS

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