AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
--------------->AtSPL8 <---------------AtSPL8 --------------->AtSPL3 <------ZmHOX2a(1) <-----------RAV1(1) -----HVH21 <----------DOF2 -------->ATHB1 ---------->DOF2 --
atgttgaggaggtactctttctgaacagtagcttggctatcattgttgtcgttacttagtttaaagttatgaagcaagacatacttctctgttaaaacag	9212000
----------->GT1 ---------->DOF2 <------ZmHOX2a(1) <----------DOF2 <-----------HVH21 ------->TEIL ----------->HVH21 -------->DOF2 <------ZmHOX2a(2)---------->DOF2 <----------ID1 -------->P <-----------HVH21 <
agaaagttgcttgttggagatcaaacttgtcattgggaaaggcaaagaaatggagacgaacccaatgccaaccaggacgggtcaaatggaacttgtaaat	9212100
<-----------ARR10 ----------->ARR10 <------ZmHOX2a(1) --------->ALFIN1 <----------DOF2 ----------DOF2 ----------->GT1 ----------->HVH21 <----------DOF2 -
ggcttcttcgcggaagattttcgcggtaaggtaaataggagaagggagtttatctgaaggtggagcagagacctgaatatcgtctttggcttctatgtac	9212200
<--------P <-----------RAV1(2) <-----------HVH21 ------>TEIL ---------->DOF2 <-------GAMYB ---
tgaaccgtttctgagtcactcttaaagactctaccttcaggggttttggttgatgacttgctaccacaatcaatgagaatgtcatcagccggtttgaaac	9212300
-------->P ------>NtERF2 <---------ALFIN1 <------NtERF2 ------>NtERF2 --------->O2 ----------->HVH21 ------->GAMYB ----------->RAV1(2) <---------ALFIN1 ------->GAMYB <------ZmHOX2a(1) -------->P <------NtERF2 <------ZmHOX2a(1) --------->ALFIN1 ------>NtERF2 <-------GAMYB ----------->GT1 -------->RAV1(1) <---------O2 ----------->GT1 <------ZmHOX2a(1)
cagcagttgggctaccaccgacggcgccaaccgctgaagctaggccggttaagaagaggaggatggtgaagaggagagtcatgaagggcctggaagaaga	9212400
--------->O2 --------->TGA1a <---------O2 <-----------GT1 ==============================bZIP_DOF <------ <---------TGA1a <----------DOF2 ------>ZmHOX2a(1) <------ZmHOX2a(1)
atctaagacaagacacatgggtatgtttggtttctttcttatctccatccctccttcgtgaagggagagagagaagagagaagaatgaggaagaaaatga	9212500
<---------------AtSPL3 <---------------AtSPL8 ----------->GT1 ---------->DOF2 ---------->DOF2 ---------->DOF2 <-----------RAV1(1) ----ID1 <------------CBF <-------GAMYB ----------->GT1 ---------->DOF2 --------->ALFIN1 <--
caagacgaaaggaaacgagattgttgggatgcttgtggttgaagaaagagcgagggaaaaaagggtacgaaagagagttgttatgtgtggctagtattct	9212600
--------------->AGL15 <---------------AGL15 <-----------------AGL3 <---------------AGL15 ----------->TBP ----------------->AGL3 -------->HAHB4 ==== ----------->GT1 <-----------------AGL2 <----------DOF2 --------------->AGL15 <--- ----------CBF =============================================================MADS_MADS ====
tattgtgtttggttataaatagtgatgtttctatttttagtaaactgttaagttgactttgtgaaaatgattctctatttcaagaaaaatgaagaactag	9212700
------>ZmHOX2a(2) <------ZmHOX2a(2) <---------AGP1 =====================HOX2a_HOX2a <------ZmHOX2a(1) <<<<<<< ======================HOX2a_HOX2a <<<<<<< =======================HOX2a_HOX2a <<<<<<< ---ZmHOX2a(1) --------->AGP1 <----------DOF2 <<<<<<< ======================HOX2a_HOX2a ------>ZmHOX2a(2) <-------TEIL
gagaggaaatctaactagatctagttatcaaggtttcgaagttcaagaagatgatctttgagagcatgaagcaaaaaccaagtagaaatacattgaatcc	9212800
----------->GT1 <<GATA-4 <<GATA-1 <<GATA-3 <------NtERF2 <<GATA-2 ---------->DOF2 --------->ALFIN1
acatagtgtatatagtgtgtacaatggccaaacagatgttcttggccagacaattgaaaataaaagaaaatagccatgggtgtcgtgtagttatgagtta	9212900

AGI:	At2g21480.1
Description:	protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61350.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G39110.1); similar to THE1 (THESEUS1), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT5G54380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47576.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64509.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98993.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Prote
Range:	from: 9209833	to: 9212448	Orientation: Reverse
Links:	TAIR MIPS

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