AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------>ZmHOX2a(1) <--------P <----------DOF2 <-------GAMYB <-----------GT1 <-----------ARR10 ---------->DOF2 ------------>AtMYB77 <--------P
aaaatatctttcctaaaacattttagacatccgaaaagaagaatgtttttaattttaatcacggttagtctatttttaccatggttggtcttggagacat	7594700
----------->GT1 ---------->DOF2 -
caatgagagattatgcaatggaaatgttcggagagataatcatgaacaagaaactagaaaagtccaatcaaacaagaaacatgctcgcccaaattgaatg	7594800
------->GAMYB ------->TEIL <-------TEIL <---------------AtSPL8 <------ZmHOX2a(1) <---------------AtSPL3 ----------->RAV1(1) ----- ---------->GT1 --------------->AtSPL3 ------>NtERF2 <-----------GT1
aatagtaagaatcaagaacgaatgaagtacgtaccaacggaatactcgaaaaccacgacgacagtaaggatgccccatacagagtatttactagcatcat	7594900
------>ZmHOX2a(2) <------ZmHOX2a(2) ================HOX2a_HOX2a ===============HOX2a_HOX2a <------ZmHOX2a(1) ------>ZmHOX2a(1) <----------DOF2 ------->GAMYB ------>ZmHOX2a(2) <---------------AGL15 <------ZmHOX2a(2) ---->AtLEC2 ----------->GT1 ----------->ARR10 ---------->TaMYB80
gcaacggctctttgaggaaaataacaacggagcagagggcaagagccattcccatcttcaccgcgaagaagatccttcgacgatcggaatgtcccaactc	7595000
<---------- ------->TEIL ------>ZmHOX2a(2) <----------DOF2 --------->PCF2
gcacaggtttgtgatcttgcggaaacacatatctgagtattcattctgcgagagaagcctctctctgctttgctgatgaaatggacccattttttcccct	7595100
--------------->AGL15 --------------->AtSPL8 <---------------AtSPL8 <-----------RAV1(1) <----------DOF2 ------------>CBF --------------->AGL15 <---------------AGL15 <-------TEIL <---- =========================================MADS_MADS ------------>CBF ------->TEIL <-------- -GT1 <----------DOF2 ---------->DOF2 <-----------HVH21 --------------->AtSPL3 --
aaattactctgaagagaacctttgttgtgtacattaaatagaaagaaacttttcatttgtgtcaatggattaatctatacgtacgttgcaattactttct	7595200
<----------DOF2 --------->ALFIN1 --------------->AGL15 <---------------AGL15 <-----------------AGL1 ----------------->AGL1 ------DOF2 ----------------->AG <--- --DOF2 ------------>CBF <-----------------AGL3 ------->TEIL -------->ID1 ---------->DOF2 <---------ALFIN1 <-----------GT1 ------>ZmHOX2a(1)
tttcccattattccattaatgcaatacttcaccacatcatctctaaaaaactttgtaagtttttgaattttacctttttcggttccttatgtgtggacct	7595300
------------>CBF <--------P --------->PCF5 ======================= --------->ALFIN1 ----------->GT1 =========== --------->ALFIN1 <------ZmHOX2a(1) <---------AtLEC2 --------HVH21 ----------->GT1 ---------->DOF2 ---------->DOF2 <------
gtgagtgggtggacccaattatgaagaggttatttattacgcgggtattttatacctaaagtttaggaaaatgtcaaaacaaaagttgcatggttagtgt	7595400
--------->TGA1a =================================bZIP_DOF <---------TGA1a =================================bZIP_DOF ===========bZIP_DOF <---------ALFIN1 ===========MYC_MYB ---------->DOF2 <-----------GT1 <----- -----RAV1(1) <----------DOF2 ----------->GT1 <-----------ARR10 <----------DOF2
tggctcgtgagtaatgtgacttgtgactttgacattttgaaagcgttacaatttattacatatctatccaccgctcgctcaccattcttcctttcaaggt	7595500
<----------DOF2 -------->P <----------DOF2 <---------- ------HVH21 <-------GAMYB ------>ZmHOX2a(1) ----------->GT1 <----------DOF2 --
caagcctacccgctcttcagttgatatttttcctatagattcttttttgggtctgattagtaattcggtatccggcttactgttttaatgatttacaata	7595600

AGI:	At2g17470.1
Description:	similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25480.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42118.1); contains InterPro domain Protein of unknown function UPF0005 (InterPro:IPR006214)
Range:	from: 7591587	to: 7595090	Orientation: Reverse
Links:	TAIR MIPS

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